RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 CLDN10P78369 228 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 CC2D2BQ6DHV5 1058 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
PHF11-215ENST00000488958 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PRR20EP86478 221 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PRR20CP86479 221 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PRR20DP86480 221 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PRR20BP86481 221 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PRR20AP86496 221 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 MYT1Q01538 1121 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 PTK7Q13308 1070 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
PHF11-215ENST00000488958 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
PHF11-215ENST00000488958 NOVA2Q9UNW9 492 aaKnown RBP11.09□□□□□ -0.63
PHF11-215ENST00000488958 PCDHGA11Q9Y5H2 935 aa11.08□□□□□ -0.64
PHF11-215ENST00000488958 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
PHF11-215ENST00000488958 LILRA1O75019 489 aa11.07□□□□□ -0.64
PHF11-215ENST00000488958 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
PHF11-215ENST00000488958 SMPD1P17405 629 aa11.07□□□□□ -0.64
PHF11-215ENST00000488958 PSME1Q06323 249 aa11.07□□□□□ -0.64
PHF11-215ENST00000488958 ELOAQ14241 798 aaKnown RBP11.07□□□□□ -0.64
PHF11-215ENST00000488958 LARGE2Q8N3Y3 721 aa11.07□□□□□ -0.64
PHF11-215ENST00000488958 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
PHF11-215ENST00000488958 ZMIZ1Q9ULJ6 1067 aa11.06□□□□□ -0.64
PHF11-215ENST00000488958 KIAA1024Q9UPX6 916 aa11.06□□□□□ -0.64
PHF11-215ENST00000488958 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
PHF11-215ENST00000488958 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
PHF11-215ENST00000488958 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
PHF11-215ENST00000488958 PDE4CQ08493 712 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 DPYDQ12882 1025 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 CCDC102BQ68D86 513 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
PHF11-215ENST00000488958 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
PHF11-215ENST00000488958 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
PHF11-215ENST00000488958 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
PHF11-215ENST00000488958 WDR4P57081 412 aaKnown RBP11.03□□□□□ -0.64
PHF11-215ENST00000488958 TPCN2Q8NHX9 752 aa11.03□□□□□ -0.64
PHF11-215ENST00000488958 USTQ9Y2C2 406 aa11.03□□□□□ -0.64
PHF11-215ENST00000488958 TMEM164Q5U3C3 297 aa11.02□□□□□ -0.65
PHF11-215ENST00000488958 SIX5Q8N196 739 aa11.02□□□□□ -0.65
PHF11-215ENST00000488958 HPS1Q92902 700 aa11.02□□□□□ -0.65
PHF11-215ENST00000488958 KLF16Q9BXK1 252 aaPredicted RBP11.02□□□□□ -0.65
PHF11-215ENST00000488958 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
PHF11-215ENST00000488958 DKK1O94907 266 aa11.01□□□□□ -0.65
PHF11-215ENST00000488958 CBLBQ13191 982 aa11.01□□□□□ -0.65
PHF11-215ENST00000488958 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
PHF11-215ENST00000488958 TMEM88BA6NKF7 163 aa11□□□□□ -0.65
PHF11-215ENST00000488958 TIMP2P16035 220 aa11□□□□□ -0.65
PHF11-215ENST00000488958 TRAIPQ9BWF2 469 aa11□□□□□ -0.65
PHF11-215ENST00000488958 SFI1A8K8P3 1242 aa10.99□□□□□ -0.65
PHF11-215ENST00000488958 SEC13P55735 322 aa10.99□□□□□ -0.65
PHF11-215ENST00000488958 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
PHF11-215ENST00000488958 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
PHF11-215ENST00000488958 GNRH1P01148 92 aa10.97□□□□□ -0.65
PHF11-215ENST00000488958 ADH1AP07327 375 aa10.97□□□□□ -0.65
PHF11-215ENST00000488958 GDF10P55107 478 aa10.96□□□□□ -0.65
PHF11-215ENST00000488958 Q6ZVU0 165 aa10.96□□□□□ -0.65
PHF11-215ENST00000488958 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 TMEM229AB2RXF0 380 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 SCNN1DP51172 638 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 AGBL1Q96MI9 1066 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
PHF11-215ENST00000488958 GFRA3O60609 400 aa10.94□□□□□ -0.66
PHF11-215ENST00000488958 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
PHF11-215ENST00000488958 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
PHF11-215ENST00000488958 RAB6BQ9NRW1 208 aa10.94□□□□□ -0.66
PHF11-215ENST00000488958 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
PHF11-215ENST00000488958 CAPN5O15484 640 aaPredicted RBP10.93□□□□□ -0.66
PHF11-215ENST00000488958 INHAP05111 366 aa10.93□□□□□ -0.66
PHF11-215ENST00000488958 PTGIRP43119 386 aa10.93□□□□□ -0.66
PHF11-215ENST00000488958 ESCO1Q5FWF5 840 aa10.93□□□□□ -0.66
PHF11-215ENST00000488958 KDF1Q8NAX2 398 aaPredicted RBP10.93□□□□□ -0.66
PHF11-215ENST00000488958 HINFPQ9BQA5 517 aa10.93□□□□□ -0.66
PHF11-215ENST00000488958 RELBQ01201 579 aa10.92□□□□□ -0.66
PHF11-215ENST00000488958 TSEN2Q8NCE0 465 aaKnown RBP10.92□□□□□ -0.66
PHF11-215ENST00000488958 A0A1W2PRU2 124 aa10.91□□□□□ -0.66
PHF11-215ENST00000488958 M0R2N6 131 aa10.91□□□□□ -0.66
PHF11-215ENST00000488958 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
PHF11-215ENST00000488958 BACH1O14867 736 aa10.91□□□□□ -0.66
PHF11-215ENST00000488958 LGR5O75473 907 aa10.91□□□□□ -0.66
PHF11-215ENST00000488958 SWI5Q1ZZU3 235 aa10.91□□□□□ -0.66
PHF11-215ENST00000488958 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
PHF11-215ENST00000488958 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
PHF11-215ENST00000488958 CLP1Q92989 425 aaKnown RBP10.9□□□□□ -0.66
PHF11-215ENST00000488958 XAGE2Q96GT9 111 aa10.9□□□□□ -0.66
PHF11-215ENST00000488958 MEN1O00255 615 aa10.89□□□□□ -0.67
PHF11-215ENST00000488958 IL2RAP01589 272 aa10.89□□□□□ -0.67
PHF11-215ENST00000488958 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
PHF11-215ENST00000488958 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
PHF11-215ENST00000488958 SLAIN2Q9P270 581 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms