RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
EPHA1-205ENST00000488068 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.61
EPHA1-205ENST00000488068 ESCO1Q5FWF5 840 aa18.83■□□□□ 0.6
EPHA1-205ENST00000488068 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
EPHA1-205ENST00000488068 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
EPHA1-205ENST00000488068 PSME1Q06323 249 aa18.81■□□□□ 0.6
EPHA1-205ENST00000488068 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
EPHA1-205ENST00000488068 ABCC4O15439 1325 aa18.81■□□□□ 0.6
EPHA1-205ENST00000488068 MCM10Q7L590 875 aa18.8■□□□□ 0.6
EPHA1-205ENST00000488068 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
EPHA1-205ENST00000488068 KCNH5Q8NCM2 988 aa18.8■□□□□ 0.6
EPHA1-205ENST00000488068 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
EPHA1-205ENST00000488068 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
EPHA1-205ENST00000488068 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
EPHA1-205ENST00000488068 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
EPHA1-205ENST00000488068 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
EPHA1-205ENST00000488068 SLIT3O75094 1523 aa18.79■□□□□ 0.6
EPHA1-205ENST00000488068 ELL2O00472 640 aaPredicted RBP18.79■□□□□ 0.6
EPHA1-205ENST00000488068 IP6K1Q92551 441 aa18.79■□□□□ 0.6
EPHA1-205ENST00000488068 PROSER2Q86WR7 435 aaPredicted RBP18.77■□□□□ 0.6
EPHA1-205ENST00000488068 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
EPHA1-205ENST00000488068 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
EPHA1-205ENST00000488068 MST1RQ04912 1400 aa18.76■□□□□ 0.59
EPHA1-205ENST00000488068 ZBTB7BO15156 539 aaPredicted RBP18.76■□□□□ 0.59
EPHA1-205ENST00000488068 NCOA3Q9Y6Q9 1424 aa18.76■□□□□ 0.59
EPHA1-205ENST00000488068 FOXO3O43524 673 aa18.75■□□□□ 0.59
EPHA1-205ENST00000488068 C1orf167Q5SNV9 1468 aa18.75■□□□□ 0.59
EPHA1-205ENST00000488068 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
EPHA1-205ENST00000488068 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
EPHA1-205ENST00000488068 DCCP43146 1447 aa18.74■□□□□ 0.59
EPHA1-205ENST00000488068 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
EPHA1-205ENST00000488068 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
EPHA1-205ENST00000488068 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
EPHA1-205ENST00000488068 PTPRCP08575 1304 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 STRCP1A6NGW2 1772 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 CACNA1FO60840 1977 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 TSPYL4Q9UJ04 414 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 ALS2Q96Q42 1657 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 USP19O94966 1318 aa18.72■□□□□ 0.59
EPHA1-205ENST00000488068 MSH6P52701 1360 aa18.71■□□□□ 0.59
EPHA1-205ENST00000488068 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
EPHA1-205ENST00000488068 RGPD2P0DJD1 1756 aa18.71■□□□□ 0.59
EPHA1-205ENST00000488068 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
EPHA1-205ENST00000488068 RGS12O14924 1447 aa18.71■□□□□ 0.58
EPHA1-205ENST00000488068 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
EPHA1-205ENST00000488068 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
EPHA1-205ENST00000488068 NCAPD2Q15021 1401 aa18.7■□□□□ 0.58
EPHA1-205ENST00000488068 LMO7Q8WWI1 1683 aa18.69■□□□□ 0.58
EPHA1-205ENST00000488068 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
EPHA1-205ENST00000488068 FAM208AQ9UK61 1670 aaKnown RBP18.68■□□□□ 0.58
EPHA1-205ENST00000488068 GCP02774 474 aa18.68■□□□□ 0.58
EPHA1-205ENST00000488068 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
EPHA1-205ENST00000488068 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
EPHA1-205ENST00000488068 GCC1Q96CN9 775 aa18.68■□□□□ 0.58
EPHA1-205ENST00000488068 MED1Q15648 1581 aaPredicted RBP18.67■□□□□ 0.58
EPHA1-205ENST00000488068 NUCB1Q02818 461 aa18.67■□□□□ 0.58
EPHA1-205ENST00000488068 GSE1Q14687 1217 aa18.66■□□□□ 0.58
EPHA1-205ENST00000488068 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
EPHA1-205ENST00000488068 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
EPHA1-205ENST00000488068 TMEM94Q12767 1356 aa18.66■□□□□ 0.58
EPHA1-205ENST00000488068 MIS18AQ9NYP9 233 aa18.66■□□□□ 0.58
EPHA1-205ENST00000488068 IL17REQ8NFR9 667 aa18.65■□□□□ 0.58
EPHA1-205ENST00000488068 CEMIPQ8WUJ3 1361 aa18.65■□□□□ 0.58
EPHA1-205ENST00000488068 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
EPHA1-205ENST00000488068 NFKBIBQ15653 356 aa18.65■□□□□ 0.58
EPHA1-205ENST00000488068 ATF3P18847 181 aa18.64■□□□□ 0.58
EPHA1-205ENST00000488068 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.58
EPHA1-205ENST00000488068 USHBP1Q8N6Y0 703 aa18.64■□□□□ 0.57
EPHA1-205ENST00000488068 KDM3BQ7LBC6 1761 aa18.64■□□□□ 0.57
EPHA1-205ENST00000488068 N4BP2Q86UW6 1770 aaPredicted RBP18.64■□□□□ 0.57
EPHA1-205ENST00000488068 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
EPHA1-205ENST00000488068 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
EPHA1-205ENST00000488068 CHD1LQ86WJ1 897 aa18.63■□□□□ 0.57
EPHA1-205ENST00000488068 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
EPHA1-205ENST00000488068 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
EPHA1-205ENST00000488068 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 AMOTQ4VCS5 1084 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 C1orf115Q9H7X2 142 aa18.61■□□□□ 0.57
EPHA1-205ENST00000488068 PLEKHO1Q53GL0 409 aaPredicted RBP18.6■□□□□ 0.57
EPHA1-205ENST00000488068 SIRT2Q8IXJ6 389 aa18.6■□□□□ 0.57
EPHA1-205ENST00000488068 ZBTB7CA1YPR0 619 aa18.6■□□□□ 0.57
EPHA1-205ENST00000488068 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
EPHA1-205ENST00000488068 CADPS2Q86UW7 1296 aa18.6■□□□□ 0.57
EPHA1-205ENST00000488068 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
EPHA1-205ENST00000488068 XIRP1Q702N8 1843 aaKnown RBP18.59■□□□□ 0.57
EPHA1-205ENST00000488068 ABCC6O95255 1503 aa18.59■□□□□ 0.57
EPHA1-205ENST00000488068 LMOD2Q6P5Q4 547 aa18.59■□□□□ 0.57
EPHA1-205ENST00000488068 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
EPHA1-205ENST00000488068 SLC4A3P48751 1232 aa18.59■□□□□ 0.57
EPHA1-205ENST00000488068 CCT4P50991 539 aaKnown RBP18.59■□□□□ 0.57
EPHA1-205ENST00000488068 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
EPHA1-205ENST00000488068 ATP10DQ9P241 1426 aa18.58■□□□□ 0.57
EPHA1-205ENST00000488068 SEC24BO95487 1268 aa18.58■□□□□ 0.57
EPHA1-205ENST00000488068 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
EPHA1-205ENST00000488068 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
EPHA1-205ENST00000488068 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
EPHA1-205ENST00000488068 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms