RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 APBA3O96018 575 aa23.26■■□□□ 1.31
HMG20B-212ENST00000487894 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
HMG20B-212ENST00000487894 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
HMG20B-212ENST00000487894 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
HMG20B-212ENST00000487894 PTF1AQ7RTS3 328 aa23.24■■□□□ 1.31
HMG20B-212ENST00000487894 CAMKK2Q96RR4 588 aa23.24■■□□□ 1.31
HMG20B-212ENST00000487894 TOGARAM1Q9Y4F4 1720 aa23.23■■□□□ 1.31
HMG20B-212ENST00000487894 EZH2Q15910 746 aaKnown RBP23.23■■□□□ 1.31
HMG20B-212ENST00000487894 RAPGEF4Q8WZA2 1011 aa23.23■■□□□ 1.31
HMG20B-212ENST00000487894 EYA1Q99502 592 aa23.23■■□□□ 1.31
HMG20B-212ENST00000487894 BCL11BQ9C0K0 894 aaPredicted RBP23.22■■□□□ 1.31
HMG20B-212ENST00000487894 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
HMG20B-212ENST00000487894 ZCRB1Q8TBF4 217 aaKnown RBP23.21■■□□□ 1.31
HMG20B-212ENST00000487894 ITGB4P16144 1822 aa23.2■■□□□ 1.3
HMG20B-212ENST00000487894 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
HMG20B-212ENST00000487894 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
HMG20B-212ENST00000487894 KCNQ2O43526 872 aa23.18■■□□□ 1.3
HMG20B-212ENST00000487894 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
HMG20B-212ENST00000487894 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
HMG20B-212ENST00000487894 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
HMG20B-212ENST00000487894 PLSCR1O15162 318 aa23.16■■□□□ 1.3
HMG20B-212ENST00000487894 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-212ENST00000487894 LY75O60449 1722 aa23.16■■□□□ 1.3
HMG20B-212ENST00000487894 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-212ENST00000487894 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.3
HMG20B-212ENST00000487894 MTHFSP49914 203 aa23.14■■□□□ 1.29
HMG20B-212ENST00000487894 IL13P35225 146 aa23.12■■□□□ 1.29
HMG20B-212ENST00000487894 VIRMAQ69YN4 1812 aaKnown RBP23.12■■□□□ 1.29
HMG20B-212ENST00000487894 PAPPAQ13219 1627 aa23.11■■□□□ 1.29
HMG20B-212ENST00000487894 CYP27B1O15528 508 aa23.11■■□□□ 1.29
HMG20B-212ENST00000487894 KDRP35968 1356 aa23.11■■□□□ 1.29
HMG20B-212ENST00000487894 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
HMG20B-212ENST00000487894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■□□□ 11.9
HMG20B-212ENST00000487894 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
HMG20B-212ENST00000487894 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
HMG20B-212ENST00000487894 PSDA5PKW4 1024 aaPredicted RBP23.07■■□□□ 1.28
HMG20B-212ENST00000487894 PROM2Q8N271 834 aa23.07■■□□□ 1.28
HMG20B-212ENST00000487894 PRIM1P49642 420 aaKnown RBP23.06■■□□□ 1.28
HMG20B-212ENST00000487894 LRP5O75197 1615 aa23.06■■□□□ 1.28
HMG20B-212ENST00000487894 TXNRD1Q16881 649 aa23.05■■□□□ 1.28
HMG20B-212ENST00000487894 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
HMG20B-212ENST00000487894 CASZ1Q86V15 1759 aa23.04■■□□□ 1.28
HMG20B-212ENST00000487894 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
HMG20B-212ENST00000487894 TUBGCP6Q96RT7 1819 aa23.04■■□□□ 1.28
HMG20B-212ENST00000487894 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
HMG20B-212ENST00000487894 SULT6B1Q6IMI4 303 aa23.04■■□□□ 1.28
HMG20B-212ENST00000487894 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
HMG20B-212ENST00000487894 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
HMG20B-212ENST00000487894 NKX1-1Q15270 411 aaPredicted RBP23.03■■□□□ 1.28
HMG20B-212ENST00000487894 QSER1Q2KHR3 1735 aa23.02■■□□□ 1.28
HMG20B-212ENST00000487894 PHKG2P15735 406 aa23.02■■□□□ 1.28
HMG20B-212ENST00000487894 PPP2R1AP30153 589 aa23.02■■□□□ 1.28
HMG20B-212ENST00000487894 C5P01031 1676 aa23.01■■□□□ 1.27
HMG20B-212ENST00000487894 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
HMG20B-212ENST00000487894 ANO8Q9HCE9 1232 aaPredicted RBP23.01■■□□□ 1.27
HMG20B-212ENST00000487894 NBPF14Q5TI25 921 aa23■■□□□ 1.27
HMG20B-212ENST00000487894 PLEKHO1Q53GL0 409 aaPredicted RBP22.99■■□□□ 1.27
HMG20B-212ENST00000487894 HMOX1P09601 288 aa22.98■■□□□ 1.27
HMG20B-212ENST00000487894 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
HMG20B-212ENST00000487894 KDM6AO15550 1401 aaPredicted RBP22.98■■□□□ 1.27
HMG20B-212ENST00000487894 ADAMTS7Q9UKP4 1686 aa22.97■■□□□ 1.27
HMG20B-212ENST00000487894 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
HMG20B-212ENST00000487894 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
HMG20B-212ENST00000487894 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
HMG20B-212ENST00000487894 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
HMG20B-212ENST00000487894 CFAP53Q96M91 514 aa22.95■■□□□ 1.26
HMG20B-212ENST00000487894 U2SURPO15042 1029 aaKnown RBP22.93■■□□□ 1.26
HMG20B-212ENST00000487894 SLC27A3Q5K4L6 730 aa22.93■■□□□ 1.26
HMG20B-212ENST00000487894 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
HMG20B-212ENST00000487894 PIGBQ92521 554 aa22.92■■□□□ 1.26
HMG20B-212ENST00000487894 ZNF831Q5JPB2 1677 aa22.91■■□□□ 1.26
HMG20B-212ENST00000487894 HSP90AB1P08238 724 aaKnown RBP22.91■■□□□ 1.26
HMG20B-212ENST00000487894 SLC15A2Q16348 729 aa22.91■■□□□ 1.26
HMG20B-212ENST00000487894 DCAF5Q96JK2 942 aa22.91■■□□□ 1.26
HMG20B-212ENST00000487894 STK32BQ9NY57 414 aa22.91■■□□□ 1.26
HMG20B-212ENST00000487894 KCNQ4P56696 695 aa22.9■■□□□ 1.26
HMG20B-212ENST00000487894 C1orf141Q5JVX7 400 aa22.9■■□□□ 1.26
HMG20B-212ENST00000487894 TMOD3Q9NYL9 352 aa22.9■■□□□ 1.26
HMG20B-212ENST00000487894 MRC1P22897 1456 aa22.9■■□□□ 1.26
HMG20B-212ENST00000487894 C4BP0C0L5 1744 aa22.89■■□□□ 1.26
HMG20B-212ENST00000487894 ZNF827Q17R98 1081 aa22.89■■□□□ 1.25
HMG20B-212ENST00000487894 CCNL1Q9UK58 526 aaPredicted RBP22.89■■□□□ 1.25
HMG20B-212ENST00000487894 KCNA4P22459 653 aa22.88■■□□□ 1.25
HMG20B-212ENST00000487894 SIPA1L3O60292 1781 aaPredicted RBP22.88■■□□□ 1.25
HMG20B-212ENST00000487894 COL5A3P25940 1745 aaPredicted RBP22.88■■□□□ 1.25
HMG20B-212ENST00000487894 ERVV-2B6SEH9 535 aa22.87■■□□□ 1.25
HMG20B-212ENST00000487894 AKAP4Q5JQC9 854 aa22.87■■□□□ 1.25
HMG20B-212ENST00000487894 UBR3Q6ZT12 1888 aa22.87■■□□□ 1.25
HMG20B-212ENST00000487894 MTHFSDQ2M296 383 aaKnown RBP22.86■■□□□ 1.25
HMG20B-212ENST00000487894 SMARCC1Q92922 1105 aaPredicted RBP22.86■■□□□ 1.25
HMG20B-212ENST00000487894 AKT1S1Q96B36 256 aa22.86■■□□□ 1.25
HMG20B-212ENST00000487894 DLG5Q8TDM6 1919 aa22.86■■□□□ 1.25
HMG20B-212ENST00000487894 CICQ96RK0 1608 aaPredicted RBP22.86■■□□□ 1.25
HMG20B-212ENST00000487894 ADRA2BP18089 450 aa22.85■■□□□ 1.25
HMG20B-212ENST00000487894 RALBP1Q15311 655 aa22.85■■□□□ 1.25
HMG20B-212ENST00000487894 PDGFDQ9GZP0 370 aaPredicted RBP22.85■■□□□ 1.25
HMG20B-212ENST00000487894 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
HMG20B-212ENST00000487894 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
HMG20B-212ENST00000487894 COL24A1Q17RW2 1714 aa22.85■■□□□ 1.25
HMG20B-212ENST00000487894 ASAP1Q9ULH1 1129 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms