RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
ITSN1-229ENST00000487427 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
ITSN1-229ENST00000487427 USHBP1Q8N6Y0 703 aa17.1■□□□□ 0.33
ITSN1-229ENST00000487427 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
ITSN1-229ENST00000487427 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
ITSN1-229ENST00000487427 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
ITSN1-229ENST00000487427 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
ITSN1-229ENST00000487427 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
ITSN1-229ENST00000487427 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
ITSN1-229ENST00000487427 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
ITSN1-229ENST00000487427 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
ITSN1-229ENST00000487427 MEGF6O75095 1541 aa17.06■□□□□ 0.32
ITSN1-229ENST00000487427 NSD2O96028 1365 aa17.06■□□□□ 0.32
ITSN1-229ENST00000487427 KIF7Q2M1P5 1343 aa17.06■□□□□ 0.32
ITSN1-229ENST00000487427 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
ITSN1-229ENST00000487427 RREB1Q92766 1687 aa17.05■□□□□ 0.32
ITSN1-229ENST00000487427 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
ITSN1-229ENST00000487427 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
ITSN1-229ENST00000487427 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
ITSN1-229ENST00000487427 EYA1Q99502 592 aa17.04■□□□□ 0.32
ITSN1-229ENST00000487427 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
ITSN1-229ENST00000487427 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
ITSN1-229ENST00000487427 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.32
ITSN1-229ENST00000487427 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 NUP188Q5SRE5 1749 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
ITSN1-229ENST00000487427 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
ITSN1-229ENST00000487427 LRP5O75197 1615 aa17.01■□□□□ 0.31
ITSN1-229ENST00000487427 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
ITSN1-229ENST00000487427 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
ITSN1-229ENST00000487427 NHSQ6T4R5 1651 aa17.01■□□□□ 0.31
ITSN1-229ENST00000487427 CYP27B1O15528 508 aa17■□□□□ 0.31
ITSN1-229ENST00000487427 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
ITSN1-229ENST00000487427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
ITSN1-229ENST00000487427 SPG7Q9UQ90 795 aa17■□□□□ 0.31
ITSN1-229ENST00000487427 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
ITSN1-229ENST00000487427 NCAPD2Q15021 1401 aa16.99■□□□□ 0.31
ITSN1-229ENST00000487427 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
ITSN1-229ENST00000487427 LRRC4BQ9NT99 713 aa16.99■□□□□ 0.31
ITSN1-229ENST00000487427 NKX1-1Q15270 411 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-229ENST00000487427 PDGFDQ9GZP0 370 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-229ENST00000487427 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
ITSN1-229ENST00000487427 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.3
ITSN1-229ENST00000487427 ANKRD26Q9UPS8 1709 aa16.95■□□□□ 0.3
ITSN1-229ENST00000487427 IGSF1Q8N6C5 1336 aa16.95■□□□□ 0.3
ITSN1-229ENST00000487427 BTAF1O14981 1849 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 ZBTB7AO95365 584 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 HMGB2P26583 209 aaKnown RBP16.93■□□□□ 0.3
ITSN1-229ENST00000487427 KCNQ4P56696 695 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
ITSN1-229ENST00000487427 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
ITSN1-229ENST00000487427 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
ITSN1-229ENST00000487427 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
ITSN1-229ENST00000487427 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
ITSN1-229ENST00000487427 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
ITSN1-229ENST00000487427 PHKG2P15735 406 aa16.91■□□□□ 0.3
ITSN1-229ENST00000487427 MTHFSP49914 203 aa16.91■□□□□ 0.3
ITSN1-229ENST00000487427 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-229ENST00000487427 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-229ENST00000487427 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
ITSN1-229ENST00000487427 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
ITSN1-229ENST00000487427 IL13P35225 146 aa16.9■□□□□ 0.3
ITSN1-229ENST00000487427 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
ITSN1-229ENST00000487427 PIGBQ92521 554 aa16.9■□□□□ 0.3
ITSN1-229ENST00000487427 TFCP2L1Q9NZI6 479 aa16.9■□□□□ 0.3
ITSN1-229ENST00000487427 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.3
ITSN1-229ENST00000487427 PTGER2P43116 358 aa16.89■□□□□ 0.29
ITSN1-229ENST00000487427 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
ITSN1-229ENST00000487427 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
ITSN1-229ENST00000487427 SLC16A10Q8TF71 515 aa16.88■□□□□ 0.29
ITSN1-229ENST00000487427 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
ITSN1-229ENST00000487427 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
ITSN1-229ENST00000487427 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
ITSN1-229ENST00000487427 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
ITSN1-229ENST00000487427 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
ITSN1-229ENST00000487427 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
ITSN1-229ENST00000487427 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
ITSN1-229ENST00000487427 CASZ1Q86V15 1759 aa16.85■□□□□ 0.29
ITSN1-229ENST00000487427 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
ITSN1-229ENST00000487427 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
ITSN1-229ENST00000487427 SGIP1Q9BQI5 828 aa16.85■□□□□ 0.29
ITSN1-229ENST00000487427 PNPLA7Q6ZV29 1317 aa16.85■□□□□ 0.29
ITSN1-229ENST00000487427 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
ITSN1-229ENST00000487427 KDRP35968 1356 aa16.84■□□□□ 0.29
ITSN1-229ENST00000487427 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.28
ITSN1-229ENST00000487427 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
ITSN1-229ENST00000487427 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
ITSN1-229ENST00000487427 LOC102724428A0A0B4J2F2 783 aa16.82■□□□□ 0.28
ITSN1-229ENST00000487427 SIK1P57059 783 aa16.82■□□□□ 0.28
ITSN1-229ENST00000487427 FLAD1Q8NFF5 587 aa16.81■□□□□ 0.28
ITSN1-229ENST00000487427 ARXQ96QS3 562 aa16.81■□□□□ 0.28
ITSN1-229ENST00000487427 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
ITSN1-229ENST00000487427 LY75O60449 1722 aa16.81■□□□□ 0.28
ITSN1-229ENST00000487427 CABP4P57796 275 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms