RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
ZNF541-204ENST00000487275 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
ZNF541-204ENST00000487275 LMO7Q8WWI1 1683 aa10.41□□□□□ -0.74
ZNF541-204ENST00000487275 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
ZNF541-204ENST00000487275 ZNF530Q6P9A1 599 aaPredicted RBP10.41□□□□□ -0.74
ZNF541-204ENST00000487275 MCM10Q7L590 875 aa10.41□□□□□ -0.74
ZNF541-204ENST00000487275 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
ZNF541-204ENST00000487275 RNF123Q5XPI4 1314 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 NUTM2BA6NNL0 878 aaPredicted RBP10.4□□□□□ -0.74
ZNF541-204ENST00000487275 NUTM2EB1AL46 878 aaPredicted RBP10.4□□□□□ -0.74
ZNF541-204ENST00000487275 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 CT47B1P0C2W7 299 aaPredicted RBP10.4□□□□□ -0.74
ZNF541-204ENST00000487275 RRP1P56182 461 aaKnown RBP10.4□□□□□ -0.74
ZNF541-204ENST00000487275 AKAP4Q5JQC9 854 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 NUTM2AQ8IVF1 878 aaPredicted RBP10.4□□□□□ -0.74
ZNF541-204ENST00000487275 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 BTG4Q9NY30 223 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 DLG5Q8TDM6 1919 aa10.4□□□□□ -0.74
ZNF541-204ENST00000487275 JCADQ9P266 1359 aa10.39□□□□□ -0.75
ZNF541-204ENST00000487275 COL14A1Q05707 1796 aaKnown RBP10.39□□□□□ -0.75
ZNF541-204ENST00000487275 ZNF853P0CG23 659 aa10.39□□□□□ -0.75
ZNF541-204ENST00000487275 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
ZNF541-204ENST00000487275 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
ZNF541-204ENST00000487275 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
ZNF541-204ENST00000487275 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
ZNF541-204ENST00000487275 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
ZNF541-204ENST00000487275 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
ZNF541-204ENST00000487275 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
ZNF541-204ENST00000487275 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
ZNF541-204ENST00000487275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.75
ZNF541-204ENST00000487275 CRB1P82279 1406 aa10.38□□□□□ -0.75
ZNF541-204ENST00000487275 CHL1O00533 1208 aa10.37□□□□□ -0.75
ZNF541-204ENST00000487275 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
ZNF541-204ENST00000487275 TSPYL4Q9UJ04 414 aa10.37□□□□□ -0.75
ZNF541-204ENST00000487275 MEGF6O75095 1541 aa10.37□□□□□ -0.75
ZNF541-204ENST00000487275 IL2RBP14784 551 aa10.36□□□□□ -0.75
ZNF541-204ENST00000487275 RARSP54136 660 aaKnown RBP10.36□□□□□ -0.75
ZNF541-204ENST00000487275 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
ZNF541-204ENST00000487275 SPATA31A6Q5VVP1 1343 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 OVOS2A0A0G2JMS6 1433 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 RNMTO43148 476 aaKnown RBP10.35□□□□□ -0.75
ZNF541-204ENST00000487275 PLIN1O60240 522 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 BCAR3O75815 825 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 CANXP27824 592 aaKnown RBP10.35□□□□□ -0.75
ZNF541-204ENST00000487275 TEFQ10587 303 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 TAF7Q15545 349 aaPredicted RBP10.35□□□□□ -0.75
ZNF541-204ENST00000487275 MPRIPQ6WCQ1 1025 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 BABAM1Q9NWV8 329 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
ZNF541-204ENST00000487275 LRRC37A3O60309 1634 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
ZNF541-204ENST00000487275 PHKG2P15735 406 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 HSPA1LP34931 641 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 ZCRB1Q8TBF4 217 aaKnown RBP10.34□□□□□ -0.75
ZNF541-204ENST00000487275 ZNF428Q96B54 188 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
ZNF541-204ENST00000487275 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
ZNF541-204ENST00000487275 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
ZNF541-204ENST00000487275 PARP4Q9UKK3 1724 aaKnown RBP10.33□□□□□ -0.76
ZNF541-204ENST00000487275 TWISTNBQ3B726 338 aaPredicted RBP10.33□□□□□ -0.76
ZNF541-204ENST00000487275 C8orf37Q96NL8 207 aa10.33□□□□□ -0.76
ZNF541-204ENST00000487275 SMC4Q9NTJ3 1288 aa10.33□□□□□ -0.76
ZNF541-204ENST00000487275 MIS18AQ9NYP9 233 aa10.33□□□□□ -0.76
ZNF541-204ENST00000487275 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
ZNF541-204ENST00000487275 VAMP4O75379 141 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 ALDH1L2Q3SY69 923 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 TSPYL6Q8N831 410 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 FRAT1Q92837 279 aaPredicted RBP10.32□□□□□ -0.76
ZNF541-204ENST00000487275 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 BCL2L13Q9BXK5 485 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 SLIT2O94813 1529 aa10.32□□□□□ -0.76
ZNF541-204ENST00000487275 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
ZNF541-204ENST00000487275 BTBD11A6QL63 1104 aa10.31□□□□□ -0.76
ZNF541-204ENST00000487275 CYP27B1O15528 508 aa10.31□□□□□ -0.76
ZNF541-204ENST00000487275 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
ZNF541-204ENST00000487275 SSH1Q8WYL5 1049 aa10.31□□□□□ -0.76
ZNF541-204ENST00000487275 DCAF5Q96JK2 942 aa10.31□□□□□ -0.76
ZNF541-204ENST00000487275 CCDC9Q9Y3X0 531 aaKnown RBP10.31□□□□□ -0.76
ZNF541-204ENST00000487275 UNC5CLQ8IV45 518 aa10.3□□□□□ -0.76
ZNF541-204ENST00000487275 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
ZNF541-204ENST00000487275 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
ZNF541-204ENST00000487275 THRAP3Q9Y2W1 955 aaKnown RBP10.3□□□□□ -0.76
ZNF541-204ENST00000487275 KDM6AO15550 1401 aaPredicted RBP10.3□□□□□ -0.76
ZNF541-204ENST00000487275 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
ZNF541-204ENST00000487275 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
ZNF541-204ENST00000487275 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
ZNF541-204ENST00000487275 IPO8O15397 1037 aaKnown RBP10.29□□□□□ -0.76
ZNF541-204ENST00000487275 MS4A1P11836 297 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 CABP4P57796 275 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 KRT24Q2M2I5 525 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 EXOC6Q8TAG9 804 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 CRBNQ96SW2 442 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 SLC52A2Q9HAB3 445 aa10.29□□□□□ -0.76
ZNF541-204ENST00000487275 PPP4R2Q9NY27 417 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms