RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
NUDCD3-209ENST00000487118 USP21Q9UK80 565 aa11.22□□□□□ -0.61
NUDCD3-209ENST00000487118 LTV1Q96GA3 475 aaPredicted RBP11.21□□□□□ -0.61
NUDCD3-209ENST00000487118 FAM208AQ9UK61 1670 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 CALD1Q05682 793 aaKnown RBP11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 RGPD2P0DJD1 1756 aa11.2□□□□□ -0.62
NUDCD3-209ENST00000487118 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 RGPD5Q99666 1765 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 ERBB3P21860 1342 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
NUDCD3-209ENST00000487118 PLEKHG2Q9H7P9 1386 aa11.18□□□□□ -0.62
NUDCD3-209ENST00000487118 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-209ENST00000487118 ZNF853P0CG23 659 aa11.18□□□□□ -0.62
NUDCD3-209ENST00000487118 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-209ENST00000487118 IFT57Q9NWB7 429 aa11.18□□□□□ -0.62
NUDCD3-209ENST00000487118 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
NUDCD3-209ENST00000487118 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-209ENST00000487118 R3HDM1Q15032 1099 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-209ENST00000487118 USHBP1Q8N6Y0 703 aa11.17□□□□□ -0.62
NUDCD3-209ENST00000487118 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-209ENST00000487118 GNAI1P63096 354 aa11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 IRX6P78412 446 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 ATRNO75882 1429 aa11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 CRB1P82279 1406 aa11.16□□□□□ -0.62
NUDCD3-209ENST00000487118 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
NUDCD3-209ENST00000487118 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
NUDCD3-209ENST00000487118 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-209ENST00000487118 CFAP44Q96MT7 982 aa11.15□□□□□ -0.62
NUDCD3-209ENST00000487118 MAP3K5Q99683 1374 aa11.15□□□□□ -0.63
NUDCD3-209ENST00000487118 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 BCL9LQ86UU0 1499 aa11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 SLC34A2O95436 690 aa11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 EXOSC9Q06265 439 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 DCTN1Q14203 1278 aa11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
NUDCD3-209ENST00000487118 GNAT3A8MTJ3 354 aa11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-209ENST00000487118 WDR17Q8IZU2 1322 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 GLI3P10071 1580 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 ADAMTS7Q9UKP4 1686 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 CHL1O00533 1208 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 MCM10Q7L590 875 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 MBIPQ9NS73 344 aa11.12□□□□□ -0.63
NUDCD3-209ENST00000487118 MEGF6O75095 1541 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 BCAR3O75815 825 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 NLRP2Q9NX02 1062 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 PPP4R2Q9NY27 417 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
NUDCD3-209ENST00000487118 PLIN1O60240 522 aa11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-209ENST00000487118 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 ALDH1L2Q3SY69 923 aa11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 RAPGEF4Q8WZA2 1011 aa11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-209ENST00000487118 VAMP4O75379 141 aa11.08□□□□□ -0.64
NUDCD3-209ENST00000487118 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-209ENST00000487118 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
NUDCD3-209ENST00000487118 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
NUDCD3-209ENST00000487118 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 C8orf58Q8NAV2 365 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 CRBNQ96SW2 442 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
NUDCD3-209ENST00000487118 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
NUDCD3-209ENST00000487118 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms