RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 APBA3O96018 575 aa17.11■□□□□ 0.33
ECHDC2-213ENST00000487040 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
ECHDC2-213ENST00000487040 PCDH11XQ9BZA7 1347 aa17.1■□□□□ 0.33
ECHDC2-213ENST00000487040 PCDH11YQ9BZA8 1340 aa17.1■□□□□ 0.33
ECHDC2-213ENST00000487040 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
ECHDC2-213ENST00000487040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
ECHDC2-213ENST00000487040 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
ECHDC2-213ENST00000487040 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
ECHDC2-213ENST00000487040 NHSQ6T4R5 1651 aa17.08■□□□□ 0.32
ECHDC2-213ENST00000487040 IL13P35225 146 aa17.08■□□□□ 0.32
ECHDC2-213ENST00000487040 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
ECHDC2-213ENST00000487040 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
ECHDC2-213ENST00000487040 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
ECHDC2-213ENST00000487040 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
ECHDC2-213ENST00000487040 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
ECHDC2-213ENST00000487040 PLSCR1O15162 318 aa17.06■□□□□ 0.32
ECHDC2-213ENST00000487040 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
ECHDC2-213ENST00000487040 KDRP35968 1356 aa17.05■□□□□ 0.32
ECHDC2-213ENST00000487040 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
ECHDC2-213ENST00000487040 DDX10Q13206 875 aaKnown RBP17.04■□□□□ 0.32
ECHDC2-213ENST00000487040 EZH2Q15910 746 aaKnown RBP17.04■□□□□ 0.32
ECHDC2-213ENST00000487040 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
ECHDC2-213ENST00000487040 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
ECHDC2-213ENST00000487040 CYP27B1O15528 508 aa17.03■□□□□ 0.32
ECHDC2-213ENST00000487040 KCNQ2O43526 872 aa17.03■□□□□ 0.32
ECHDC2-213ENST00000487040 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
ECHDC2-213ENST00000487040 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
ECHDC2-213ENST00000487040 RREB1Q92766 1687 aa17.03■□□□□ 0.32
ECHDC2-213ENST00000487040 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
ECHDC2-213ENST00000487040 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
ECHDC2-213ENST00000487040 SULT6B1Q6IMI4 303 aa17.02■□□□□ 0.32
ECHDC2-213ENST00000487040 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
ECHDC2-213ENST00000487040 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
ECHDC2-213ENST00000487040 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
ECHDC2-213ENST00000487040 IFNL2Q8IZJ0 200 aa17.01■□□□□ 0.31
ECHDC2-213ENST00000487040 RALBP1Q15311 655 aa17■□□□□ 0.31
ECHDC2-213ENST00000487040 BTAF1O14981 1849 aa17■□□□□ 0.31
ECHDC2-213ENST00000487040 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-213ENST00000487040 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
ECHDC2-213ENST00000487040 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
ECHDC2-213ENST00000487040 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
ECHDC2-213ENST00000487040 PHKG2P15735 406 aa16.98■□□□□ 0.31
ECHDC2-213ENST00000487040 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
ECHDC2-213ENST00000487040 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
ECHDC2-213ENST00000487040 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
ECHDC2-213ENST00000487040 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
ECHDC2-213ENST00000487040 TXNRD1Q16881 649 aa16.96■□□□□ 0.31
ECHDC2-213ENST00000487040 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
ECHDC2-213ENST00000487040 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
ECHDC2-213ENST00000487040 HMOX1P09601 288 aa16.95■□□□□ 0.3
ECHDC2-213ENST00000487040 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
ECHDC2-213ENST00000487040 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
ECHDC2-213ENST00000487040 PROM2Q8N271 834 aa16.94■□□□□ 0.3
ECHDC2-213ENST00000487040 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
ECHDC2-213ENST00000487040 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
ECHDC2-213ENST00000487040 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
ECHDC2-213ENST00000487040 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
ECHDC2-213ENST00000487040 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
ECHDC2-213ENST00000487040 ITGB4P16144 1822 aa16.91■□□□□ 0.3
ECHDC2-213ENST00000487040 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
ECHDC2-213ENST00000487040 SMARCC1Q92922 1105 aaPredicted RBP16.91■□□□□ 0.3
ECHDC2-213ENST00000487040 TMOD3Q9NYL9 352 aa16.91■□□□□ 0.3
ECHDC2-213ENST00000487040 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
ECHDC2-213ENST00000487040 LY75O60449 1722 aa16.9■□□□□ 0.3
ECHDC2-213ENST00000487040 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
ECHDC2-213ENST00000487040 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
ECHDC2-213ENST00000487040 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
ECHDC2-213ENST00000487040 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 FCHSD2O94868 740 aa16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 PIGBQ92521 554 aa16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 STK32BQ9NY57 414 aa16.89■□□□□ 0.29
ECHDC2-213ENST00000487040 MTHFSDQ2M296 383 aaKnown RBP16.88■□□□□ 0.29
ECHDC2-213ENST00000487040 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
ECHDC2-213ENST00000487040 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
ECHDC2-213ENST00000487040 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
ECHDC2-213ENST00000487040 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
ECHDC2-213ENST00000487040 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-213ENST00000487040 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-213ENST00000487040 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-213ENST00000487040 CABP4P57796 275 aa16.86■□□□□ 0.29
ECHDC2-213ENST00000487040 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
ECHDC2-213ENST00000487040 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
ECHDC2-213ENST00000487040 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
ECHDC2-213ENST00000487040 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
ECHDC2-213ENST00000487040 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
ECHDC2-213ENST00000487040 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
ECHDC2-213ENST00000487040 NEFMP07197 916 aa16.83■□□□□ 0.28
ECHDC2-213ENST00000487040 MRC1P22897 1456 aa16.83■□□□□ 0.28
ECHDC2-213ENST00000487040 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
ECHDC2-213ENST00000487040 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
ECHDC2-213ENST00000487040 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
ECHDC2-213ENST00000487040 ATG3Q9NT62 314 aa16.82■□□□□ 0.28
ECHDC2-213ENST00000487040 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
ECHDC2-213ENST00000487040 LRP5O75197 1615 aa16.81■□□□□ 0.28
ECHDC2-213ENST00000487040 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
ECHDC2-213ENST00000487040 SIK1P57059 783 aa16.81■□□□□ 0.28
ECHDC2-213ENST00000487040 NFATC2IPQ8NCF5 419 aa16.81■□□□□ 0.28
ECHDC2-213ENST00000487040 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms