RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 KDRP35968 1356 aa17.87■□□□□ 0.45
SF1-216ENST00000486867 BTAF1O14981 1849 aa17.86■□□□□ 0.45
SF1-216ENST00000486867 IL13P35225 146 aa17.86■□□□□ 0.45
SF1-216ENST00000486867 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
SF1-216ENST00000486867 ITGB4P16144 1822 aa17.86■□□□□ 0.45
SF1-216ENST00000486867 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
SF1-216ENST00000486867 RAPGEF4Q8WZA2 1011 aa17.85■□□□□ 0.45
SF1-216ENST00000486867 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
SF1-216ENST00000486867 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
SF1-216ENST00000486867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.84■□□□□ 0.45
SF1-216ENST00000486867 TATP17735 454 aaPredicted RBP17.83■□□□□ 0.44
SF1-216ENST00000486867 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
SF1-216ENST00000486867 NUP188Q5SRE5 1749 aa17.82■□□□□ 0.44
SF1-216ENST00000486867 TRIM37O94972 964 aa17.82■□□□□ 0.44
SF1-216ENST00000486867 PPP2R1AP30153 589 aa17.82■□□□□ 0.44
SF1-216ENST00000486867 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
SF1-216ENST00000486867 BAG6P46379 1132 aa17.8■□□□□ 0.44
SF1-216ENST00000486867 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
SF1-216ENST00000486867 LY75O60449 1722 aa17.8■□□□□ 0.44
SF1-216ENST00000486867 PCDH11XQ9BZA7 1347 aa17.79■□□□□ 0.44
SF1-216ENST00000486867 PCDH11YQ9BZA8 1340 aa17.79■□□□□ 0.44
SF1-216ENST00000486867 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
SF1-216ENST00000486867 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
SF1-216ENST00000486867 CYP27B1O15528 508 aa17.78■□□□□ 0.44
SF1-216ENST00000486867 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
SF1-216ENST00000486867 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
SF1-216ENST00000486867 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
SF1-216ENST00000486867 PLSCR1O15162 318 aa17.77■□□□□ 0.44
SF1-216ENST00000486867 RALBP1Q15311 655 aa17.77■□□□□ 0.44
SF1-216ENST00000486867 CAMKK2Q96RR4 588 aa17.77■□□□□ 0.44
SF1-216ENST00000486867 ADAMTS7Q9UKP4 1686 aa17.77■□□□□ 0.43
SF1-216ENST00000486867 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
SF1-216ENST00000486867 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
SF1-216ENST00000486867 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
SF1-216ENST00000486867 SPG7Q9UQ90 795 aa17.76■□□□□ 0.43
SF1-216ENST00000486867 KCNQ2O43526 872 aa17.74■□□□□ 0.43
SF1-216ENST00000486867 APBA3O96018 575 aa17.74■□□□□ 0.43
SF1-216ENST00000486867 EN1Q05925 392 aaPredicted RBP17.74■□□□□ 0.43
SF1-216ENST00000486867 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
SF1-216ENST00000486867 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
SF1-216ENST00000486867 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
SF1-216ENST00000486867 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
SF1-216ENST00000486867 PAPPAQ13219 1627 aa17.72■□□□□ 0.43
SF1-216ENST00000486867 TAF1LQ8IZX4 1826 aa17.71■□□□□ 0.43
SF1-216ENST00000486867 PHKG2P15735 406 aa17.71■□□□□ 0.43
SF1-216ENST00000486867 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
SF1-216ENST00000486867 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
SF1-216ENST00000486867 IFNL2Q8IZJ0 200 aa17.7■□□□□ 0.42
SF1-216ENST00000486867 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
SF1-216ENST00000486867 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
SF1-216ENST00000486867 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
SF1-216ENST00000486867 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
SF1-216ENST00000486867 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
SF1-216ENST00000486867 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
SF1-216ENST00000486867 KDM6AO15550 1401 aaPredicted RBP17.68■□□□□ 0.42
SF1-216ENST00000486867 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
SF1-216ENST00000486867 PROM2Q8N271 834 aa17.68■□□□□ 0.42
SF1-216ENST00000486867 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
SF1-216ENST00000486867 HMOX1P09601 288 aa17.67■□□□□ 0.42
SF1-216ENST00000486867 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
SF1-216ENST00000486867 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
SF1-216ENST00000486867 ZNF530Q6P9A1 599 aaPredicted RBP17.66■□□□□ 0.42
SF1-216ENST00000486867 RSPH6AQ9H0K4 717 aa17.66■□□□□ 0.42
SF1-216ENST00000486867 MRC1P22897 1456 aa17.66■□□□□ 0.42
SF1-216ENST00000486867 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
SF1-216ENST00000486867 CICQ96RK0 1608 aaPredicted RBP17.65■□□□□ 0.42
SF1-216ENST00000486867 C5P01031 1676 aa17.64■□□□□ 0.42
SF1-216ENST00000486867 TUBGCP6Q96RT7 1819 aa17.64■□□□□ 0.41
SF1-216ENST00000486867 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
SF1-216ENST00000486867 FCHSD2O94868 740 aa17.64■□□□□ 0.41
SF1-216ENST00000486867 TXNRD1Q16881 649 aa17.64■□□□□ 0.41
SF1-216ENST00000486867 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
SF1-216ENST00000486867 AKAP4Q5JQC9 854 aa17.63■□□□□ 0.41
SF1-216ENST00000486867 CASZ1Q86V15 1759 aa17.63■□□□□ 0.41
SF1-216ENST00000486867 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
SF1-216ENST00000486867 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
SF1-216ENST00000486867 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
SF1-216ENST00000486867 PIGBQ92521 554 aa17.61■□□□□ 0.41
SF1-216ENST00000486867 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
SF1-216ENST00000486867 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
SF1-216ENST00000486867 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.412e-19■■□□□ 13.3
SF1-216ENST00000486867 SLC27A3Q5K4L6 730 aa17.6■□□□□ 0.41
SF1-216ENST00000486867 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
SF1-216ENST00000486867 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
SF1-216ENST00000486867 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
SF1-216ENST00000486867 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
SF1-216ENST00000486867 LRP5O75197 1615 aa17.58■□□□□ 0.41
SF1-216ENST00000486867 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
SF1-216ENST00000486867 MPRIPQ6WCQ1 1025 aa17.58■□□□□ 0.4
SF1-216ENST00000486867 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
SF1-216ENST00000486867 PHACTR3Q96KR7 559 aa17.58■□□□□ 0.4
SF1-216ENST00000486867 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
SF1-216ENST00000486867 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
SF1-216ENST00000486867 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
SF1-216ENST00000486867 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
SF1-216ENST00000486867 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
SF1-216ENST00000486867 COL24A1Q17RW2 1714 aa17.57■□□□□ 0.4
SF1-216ENST00000486867 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
SF1-216ENST00000486867 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
SF1-216ENST00000486867 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms