RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 TNFRSF10AO00220 468 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 CSB-PGBD3P0DP91 1061 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 GTF2IP78347 998 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 MYT1Q01538 1121 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 PTK7Q13308 1070 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 RETREG2Q8NC44 543 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 USTQ9Y2C2 406 aa9.18□□□□□ -0.94
LMBR1-218ENST00000486837 CRTC2Q53ET0 693 aaPredicted RBP9.17□□□□□ -0.94
LMBR1-218ENST00000486837 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
LMBR1-218ENST00000486837 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
LMBR1-218ENST00000486837 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
LMBR1-218ENST00000486837 DNAAF2Q9NVR5 837 aaKnown RBP9.17□□□□□ -0.94
LMBR1-218ENST00000486837 J3QL48 77 aa9.16□□□□□ -0.94
LMBR1-218ENST00000486837 SCTRP47872 440 aa9.16□□□□□ -0.94
LMBR1-218ENST00000486837 CLDN10P78369 228 aa9.16□□□□□ -0.94
LMBR1-218ENST00000486837 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
LMBR1-218ENST00000486837 LILRA1O75019 489 aa9.15□□□□□ -0.94
LMBR1-218ENST00000486837 SIX5Q8N196 739 aa9.15□□□□□ -0.94
LMBR1-218ENST00000486837 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
LMBR1-218ENST00000486837 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
LMBR1-218ENST00000486837 NOVA2Q9UNW9 492 aaKnown RBP9.15□□□□□ -0.94
LMBR1-218ENST00000486837 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
LMBR1-218ENST00000486837 PDIA4P13667 645 aaKnown RBP9.14□□□□□ -0.95
LMBR1-218ENST00000486837 SMPD1P17405 629 aa9.14□□□□□ -0.95
LMBR1-218ENST00000486837 ANKMY2Q8IV38 441 aa9.14□□□□□ -0.95
LMBR1-218ENST00000486837 TRAIPQ9BWF2 469 aa9.14□□□□□ -0.95
LMBR1-218ENST00000486837 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
LMBR1-218ENST00000486837 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
LMBR1-218ENST00000486837 ZMIZ1Q9ULJ6 1067 aa9.13□□□□□ -0.95
LMBR1-218ENST00000486837 DKK1O94907 266 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 PSME1Q06323 249 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
LMBR1-218ENST00000486837 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
LMBR1-218ENST00000486837 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
LMBR1-218ENST00000486837 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
LMBR1-218ENST00000486837 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
LMBR1-218ENST00000486837 DPYDQ12882 1025 aa9.11□□□□□ -0.95
LMBR1-218ENST00000486837 TPCN2Q8NHX9 752 aa9.11□□□□□ -0.95
LMBR1-218ENST00000486837 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
LMBR1-218ENST00000486837 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 ZIC2O95409 532 aaPredicted RBP9.1□□□□□ -0.95
LMBR1-218ENST00000486837 GNRH1P01148 92 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 TIMP2P16035 220 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 SEC13P55735 322 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 Q6ZVU0 165 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
LMBR1-218ENST00000486837 M0R2N6 131 aa9.09□□□□□ -0.95
LMBR1-218ENST00000486837 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
LMBR1-218ENST00000486837 ADH1AP07327 375 aa9.09□□□□□ -0.95
LMBR1-218ENST00000486837 SWI5Q1ZZU3 235 aa9.08□□□□□ -0.96
LMBR1-218ENST00000486837 HPS1Q92902 700 aa9.08□□□□□ -0.96
LMBR1-218ENST00000486837 SCNN1DP51172 638 aa9.07□□□□□ -0.96
LMBR1-218ENST00000486837 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
LMBR1-218ENST00000486837 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
LMBR1-218ENST00000486837 TMEM229AB2RXF0 380 aa9.06□□□□□ -0.96
LMBR1-218ENST00000486837 GDF10P55107 478 aa9.06□□□□□ -0.96
LMBR1-218ENST00000486837 CBLBQ13191 982 aa9.06□□□□□ -0.96
LMBR1-218ENST00000486837 CLP1Q92989 425 aaKnown RBP9.06□□□□□ -0.96
LMBR1-218ENST00000486837 SFI1A8K8P3 1242 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 BACH1O14867 736 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 AVPP01185 164 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 INHAP05111 366 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 MEIOBQ8N635 442 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
LMBR1-218ENST00000486837 ETNK1Q9HBU6 452 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
LMBR1-218ENST00000486837 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
LMBR1-218ENST00000486837 NRG2O14511 850 aaPredicted RBP9.04□□□□□ -0.96
LMBR1-218ENST00000486837 PTGIRP43119 386 aa9.04□□□□□ -0.96
LMBR1-218ENST00000486837 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
LMBR1-218ENST00000486837 XAGE2Q96GT9 111 aa9.04□□□□□ -0.96
LMBR1-218ENST00000486837 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
LMBR1-218ENST00000486837 DGAT1O75907 488 aa9.03□□□□□ -0.96
LMBR1-218ENST00000486837 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
LMBR1-218ENST00000486837 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
LMBR1-218ENST00000486837 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
LMBR1-218ENST00000486837 SLC4A9Q96Q91 983 aa9.03□□□□□ -0.96
LMBR1-218ENST00000486837 BRD1O95696 1058 aa9.02□□□□□ -0.97
LMBR1-218ENST00000486837 CLN3Q13286 438 aa9.02□□□□□ -0.97
LMBR1-218ENST00000486837 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.97
LMBR1-218ENST00000486837 TSEN34Q9BSV6 310 aaKnown RBP9.02□□□□□ -0.97
LMBR1-218ENST00000486837 ARHGEF10LQ9HCE6 1279 aa9.02□□□□□ -0.97
LMBR1-218ENST00000486837 CARNS1A5YM72 827 aa9.01□□□□□ -0.97
LMBR1-218ENST00000486837 GFRA3O60609 400 aa9.01□□□□□ -0.97
LMBR1-218ENST00000486837 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
LMBR1-218ENST00000486837 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
LMBR1-218ENST00000486837 A0A1W2PRU2 124 aa9□□□□□ -0.97
LMBR1-218ENST00000486837 STAU1O95793 577 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms