RNA–Protein interactions for RNA: ENST00000486812.5

PRDM15-212, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 7,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-212ENST00000486812 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
PRDM15-212ENST00000486812 ZSCAN31Q96LW9 406 aaPredicted RBP12.09□□□□□ -0.47
PRDM15-212ENST00000486812 ZFYP08048 801 aaPredicted RBP12.08□□□□□ -0.48
PRDM15-212ENST00000486812 C6orf163Q5TEZ5 329 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 DNAJC21Q5F1R6 531 aaKnown RBP12.08□□□□□ -0.48
PRDM15-212ENST00000486812 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 LMNTD2Q8IXW0 634 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
PRDM15-212ENST00000486812 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
PRDM15-212ENST00000486812 CNTROBQ8N137 903 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 TUBBP07437 444 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 INPP5BP32019 993 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 SH3BGRP55822 239 aaPredicted RBP12.07□□□□□ -0.48
PRDM15-212ENST00000486812 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
PRDM15-212ENST00000486812 HSP90AB4PQ58FF6 505 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
PRDM15-212ENST00000486812 CCDC6Q16204 474 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 GOLGA1Q92805 767 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 ST20-MTHFSA0A0A6YYL1 179 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 ME1P48163 572 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 IFFO1Q0D2I5 559 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 LARP1BQ659C4 914 aaKnown RBP12.07□□□□□ -0.48
PRDM15-212ENST00000486812 TAF4BQ92750 862 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 ZNF830Q96NB3 372 aaPredicted RBP12.07□□□□□ -0.48
PRDM15-212ENST00000486812 SOGA1O94964 1423 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 MCM6Q14566 821 aa12.07□□□□□ -0.48
PRDM15-212ENST00000486812 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRDM15-212ENST00000486812 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
PRDM15-212ENST00000486812 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
PRDM15-212ENST00000486812 A6NNZ2 444 aa12.06□□□□□ -0.48
PRDM15-212ENST00000486812 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
PRDM15-212ENST00000486812 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
PRDM15-212ENST00000486812 SH2D4BQ5SQS7 431 aa12.06□□□□□ -0.48
PRDM15-212ENST00000486812 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
PRDM15-212ENST00000486812 TRDNQ13061 729 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 HDXQ7Z353 690 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 TBC1D32Q96NH3 1257 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 DDX19AQ9NUU7 478 aaKnown RBP12.05□□□□□ -0.48
PRDM15-212ENST00000486812 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 KIF1CO43896 1103 aaKnown RBP12.05□□□□□ -0.48
PRDM15-212ENST00000486812 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
PRDM15-212ENST00000486812 DBN1Q16643 649 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
PRDM15-212ENST00000486812 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
PRDM15-212ENST00000486812 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 ZSCAN26Q16670 478 aa12.05□□□□□ -0.48
PRDM15-212ENST00000486812 CAMK4Q16566 473 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 CCDC196A0A1B0GTZ2 297 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 SCAND2PQ9GZW5 306 aaPredicted RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 RLBP1P12271 317 aa12.04□□□□□ -0.48
PRDM15-212ENST00000486812 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 CKAP4Q07065 602 aaKnown RBP12.04□□□□□ -0.48
PRDM15-212ENST00000486812 HIP1O00291 1037 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 FYB1O15117 783 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 BUB1BO60566 1050 aaPredicted RBP12.03□□□□□ -0.48
PRDM15-212ENST00000486812 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
PRDM15-212ENST00000486812 CEBPZQ03701 1054 aaKnown RBP12.03□□□□□ -0.48
PRDM15-212ENST00000486812 PIBF1Q8WXW3 757 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
PRDM15-212ENST00000486812 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
PRDM15-212ENST00000486812 FAM76AQ8TAV0 307 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 ATP2C2O75185 946 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 GNG11P61952 73 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 STX1AQ16623 288 aa12.03□□□□□ -0.48
PRDM15-212ENST00000486812 ZNF500O60304 480 aaPredicted RBP12.02□□□□□ -0.48
PRDM15-212ENST00000486812 STIM1Q13586 685 aa12.02□□□□□ -0.48
PRDM15-212ENST00000486812 WHAMMP3Q1A5X7 153 aa12.02□□□□□ -0.48
PRDM15-212ENST00000486812 CCDC12Q8WUD4 166 aaPredicted RBP12.02□□□□□ -0.48
PRDM15-212ENST00000486812 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.48
PRDM15-212ENST00000486812 KIF4AO95239 1232 aa12.02□□□□□ -0.48
PRDM15-212ENST00000486812 PPP2R5AQ15172 486 aa12.02□□□□□ -0.48
PRDM15-212ENST00000486812 CCDC113Q9H0I3 377 aa12.02□□□□□ -0.48
PRDM15-212ENST00000486812 DHX29Q7Z478 1369 aaKnown RBP12.02□□□□□ -0.48
PRDM15-212ENST00000486812 CTAGE15A4D2H0 777 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 CTAGE8P0CG41 777 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 SKILP12757 684 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 CTAGE6Q86UF2 777 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 CTAGE4Q8IX94 777 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 VCXQ9H320 206 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 LACTBP83111 547 aaPredicted RBP12.02□□□□□ -0.49
PRDM15-212ENST00000486812 MAATS1Q7Z4T9 603 aa12.02□□□□□ -0.49
PRDM15-212ENST00000486812 UBE2HP62256 183 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms