RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 OFD1O75665 1012 aa14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 RABEP1Q15276 862 aa14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 SPC24Q8NBT2 197 aa14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 OTUD7AQ8TE49 926 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 LARP6Q9BRS8 491 aaKnown RBP14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 CSPP1Q1MSJ5 1256 aa14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 SYAP1Q96A49 352 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 CCDC39Q9UFE4 941 aa14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
SHROOM3-208ENST00000486758 UNC13BO14795 1591 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 SYNMO15061 1565 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 HDAC1Q13547 482 aaPredicted RBP14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 MCCP23508 829 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 MEIS3Q99687 375 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 UPF3BQ9BZI7 483 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 PPRC1Q5VV67 1664 aaKnown RBP14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 GCC1Q96CN9 775 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
SHROOM3-208ENST00000486758 TOM1O60784 492 aa14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 BMP2KLQ5H9B9 411 aa14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 MYOM1P52179 1685 aa14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 FGD1P98174 961 aa14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 C17orf53Q8N3J3 647 aaPredicted RBP14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
SHROOM3-208ENST00000486758 NEO1Q92859 1461 aa14.96□□□□□ -0.01
SHROOM3-208ENST00000486758 ANXA1P04083 346 aa14.96□□□□□ -0.01
SHROOM3-208ENST00000486758 AIMP1Q12904 312 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-208ENST00000486758 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
SHROOM3-208ENST00000486758 USP25Q9UHP3 1055 aa14.96□□□□□ -0.01
SHROOM3-208ENST00000486758 MADDQ8WXG6 1647 aa14.96□□□□□ -0.02
SHROOM3-208ENST00000486758 REC8O95072 547 aa14.96□□□□□ -0.02
SHROOM3-208ENST00000486758 SNX21Q969T3 373 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 ACEP12821 1306 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 MRPL50Q8N5N7 158 aaKnown RBP14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 ZNF592Q92610 1267 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 JARID2Q92833 1246 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 MAP7D2Q96T17 732 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 TSPY26PQ9H489 355 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 FIBPO43427 364 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
SHROOM3-208ENST00000486758 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 ALDH1L2Q3SY69 923 aa14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 PLEKHF1Q96S99 279 aa14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 RBM25P49756 843 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 TEFQ10587 303 aa14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 DDX54Q8TDD1 881 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 EIF4A2Q14240 407 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 TTC12Q9H892 705 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-208ENST00000486758 SURF6O75683 361 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 GOLGA6L4A6NEF3 574 aa14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 PPIP5K1Q6PFW1 1433 aa14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 ANKLE2Q86XL3 938 aa14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 NSD2O96028 1365 aa14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 CDK11BP21127 795 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-208ENST00000486758 CSB-PGBD3P0DP91 1061 aa14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 ZNF771Q7L3S4 317 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 ZBTB7BO15156 539 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 PSME1Q06323 249 aa14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 NUTM1Q86Y26 1132 aa14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 ZKSCAN5Q9Y2L8 839 aa14.92□□□□□ -0.02
SHROOM3-208ENST00000486758 ABCC11Q96J66 1382 aa14.91□□□□□ -0.02
SHROOM3-208ENST00000486758 G2E3Q7L622 706 aa14.91□□□□□ -0.02
SHROOM3-208ENST00000486758 KIF2CQ99661 725 aa14.91□□□□□ -0.02
SHROOM3-208ENST00000486758 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
SHROOM3-208ENST00000486758 MEX3CQ5U5Q3 659 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 AMOTL2Q9Y2J4 779 aa14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 PTPRMP28827 1452 aa14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-208ENST00000486758 VPS37CA5D8V6 355 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 PHF14O94880 888 aa14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 ESCO1Q5FWF5 840 aa14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 TMEM63CQ9P1W3 806 aa14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 CFAP74Q9C0B2 1584 aa14.89□□□□□ -0.03
SHROOM3-208ENST00000486758 IL13P35225 146 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 KIF1BO60333 1816 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 ARAP3Q8WWN8 1544 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 NPHP1O15259 732 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 MBD3O95983 291 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 GNAI2P04899 355 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 IQGAP1P46940 1657 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
SHROOM3-208ENST00000486758 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 SIRT2Q8IXJ6 389 aa14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 CEP152O94986 1710 aa14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 HCLS1P14317 486 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 SDSP20132 328 aa14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 FBXW7Q969H0 707 aa14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 NOL7Q9UMY1 257 aaKnown RBP14.87□□□□□ -0.03
SHROOM3-208ENST00000486758 SBNO2Q9Y2G9 1366 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms