RNA–Protein interactions for RNA: ENST00000486686.1

LAMP3-205, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 5

Gene LAMP3, Length 469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-205ENST00000486686 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
LAMP3-205ENST00000486686 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
LAMP3-205ENST00000486686 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
LAMP3-205ENST00000486686 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
LAMP3-205ENST00000486686 TESK2Q96S53 571 aa23.49■■□□□ 1.35
LAMP3-205ENST00000486686 PRIM1P49642 420 aaKnown RBP23.48■■□□□ 1.35
LAMP3-205ENST00000486686 PNPLA7Q6ZV29 1317 aa23.48■■□□□ 1.35
LAMP3-205ENST00000486686 COG3Q96JB2 828 aa23.47■■□□□ 1.35
LAMP3-205ENST00000486686 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
LAMP3-205ENST00000486686 A0A1W2PP64 1363 aa23.46■■□□□ 1.35
LAMP3-205ENST00000486686 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
LAMP3-205ENST00000486686 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
LAMP3-205ENST00000486686 ZCRB1Q8TBF4 217 aaKnown RBP23.46■■□□□ 1.35
LAMP3-205ENST00000486686 FAM208AQ9UK61 1670 aaKnown RBP23.45■■□□□ 1.34
LAMP3-205ENST00000486686 AMPHP49418 695 aa23.45■■□□□ 1.34
LAMP3-205ENST00000486686 GRIN3BO60391 1043 aa23.44■■□□□ 1.34
LAMP3-205ENST00000486686 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
LAMP3-205ENST00000486686 TMF1P82094 1093 aa23.43■■□□□ 1.34
LAMP3-205ENST00000486686 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
LAMP3-205ENST00000486686 HOXC9P31274 260 aa23.42■■□□□ 1.34
LAMP3-205ENST00000486686 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
LAMP3-205ENST00000486686 CCNL1Q9UK58 526 aaPredicted RBP23.42■■□□□ 1.34
LAMP3-205ENST00000486686 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
LAMP3-205ENST00000486686 MAP3K19Q56UN5 1328 aa23.41■■□□□ 1.34
LAMP3-205ENST00000486686 COL24A1Q17RW2 1714 aa23.41■■□□□ 1.34
LAMP3-205ENST00000486686 MSH5O43196 834 aa23.4■■□□□ 1.34
LAMP3-205ENST00000486686 KCNQ4P56696 695 aa23.4■■□□□ 1.34
LAMP3-205ENST00000486686 KIF7Q2M1P5 1343 aa23.39■■□□□ 1.34
LAMP3-205ENST00000486686 NLGN2Q8NFZ4 835 aa23.37■■□□□ 1.33
LAMP3-205ENST00000486686 FLAD1Q8NFF5 587 aa23.36■■□□□ 1.33
LAMP3-205ENST00000486686 RAPGEF4Q8WZA2 1011 aa23.36■■□□□ 1.33
LAMP3-205ENST00000486686 LY75O60449 1722 aa23.36■■□□□ 1.33
LAMP3-205ENST00000486686 GOLGB1Q14789 3259 aaKnown RBP23.35■■□□□ 1.33
LAMP3-205ENST00000486686 NSD2O96028 1365 aa23.35■■□□□ 1.33
LAMP3-205ENST00000486686 COL23A1Q86Y22 540 aaPredicted RBP23.34■■□□□ 1.33
LAMP3-205ENST00000486686 RTL1A6NKG5 1358 aa23.34■■□□□ 1.33
LAMP3-205ENST00000486686 DIEXFQ68CQ4 756 aaKnown RBP23.33■■□□□ 1.33
LAMP3-205ENST00000486686 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.32
LAMP3-205ENST00000486686 TUBGCP6Q96RT7 1819 aa23.32■■□□□ 1.32
LAMP3-205ENST00000486686 TATP17735 454 aaPredicted RBP23.32■■□□□ 1.32
LAMP3-205ENST00000486686 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
LAMP3-205ENST00000486686 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
LAMP3-205ENST00000486686 CD2APQ9Y5K6 639 aa23.32■■□□□ 1.32
LAMP3-205ENST00000486686 YBX3P16989 372 aaKnown RBP eCLIP23.31■■□□□ 1.32
LAMP3-205ENST00000486686 FBLN1P23142 703 aa23.31■■□□□ 1.32
LAMP3-205ENST00000486686 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
LAMP3-205ENST00000486686 MEGF6O75095 1541 aa23.3■■□□□ 1.32
LAMP3-205ENST00000486686 DDX10Q13206 875 aaKnown RBP23.3■■□□□ 1.32
LAMP3-205ENST00000486686 FYB1O15117 783 aa23.28■■□□□ 1.32
LAMP3-205ENST00000486686 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
LAMP3-205ENST00000486686 RGPD2P0DJD1 1756 aa23.27■■□□□ 1.32
LAMP3-205ENST00000486686 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
LAMP3-205ENST00000486686 PCDH11XQ9BZA7 1347 aa23.27■■□□□ 1.32
LAMP3-205ENST00000486686 PCDH11YQ9BZA8 1340 aa23.27■■□□□ 1.32
LAMP3-205ENST00000486686 SHANK3Q9BYB0 1731 aa23.26■■□□□ 1.31
LAMP3-205ENST00000486686 MSL1Q68DK7 614 aa23.26■■□□□ 1.31
LAMP3-205ENST00000486686 USHBP1Q8N6Y0 703 aa23.25■■□□□ 1.31
LAMP3-205ENST00000486686 GGNBP2Q9H3C7 697 aa23.25■■□□□ 1.31
LAMP3-205ENST00000486686 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
LAMP3-205ENST00000486686 INSRP06213 1382 aa23.24■■□□□ 1.31
LAMP3-205ENST00000486686 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
LAMP3-205ENST00000486686 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
LAMP3-205ENST00000486686 PALLDQ8WX93 1383 aa23.23■■□□□ 1.31
LAMP3-205ENST00000486686 CEP350Q5VT06 3117 aa23.23■■□□□ 1.31
LAMP3-205ENST00000486686 IFFO2Q5TF58 517 aa23.22■■□□□ 1.31
LAMP3-205ENST00000486686 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
LAMP3-205ENST00000486686 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
LAMP3-205ENST00000486686 AK7Q96M32 723 aa23.21■■□□□ 1.31
LAMP3-205ENST00000486686 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
LAMP3-205ENST00000486686 C5P01031 1676 aa23.19■■□□□ 1.3
LAMP3-205ENST00000486686 NSD3Q9BZ95 1437 aa23.19■■□□□ 1.3
LAMP3-205ENST00000486686 FLT4P35916 1363 aa23.19■■□□□ 1.3
LAMP3-205ENST00000486686 CYP27B1O15528 508 aa23.18■■□□□ 1.3
LAMP3-205ENST00000486686 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
LAMP3-205ENST00000486686 TAF1LQ8IZX4 1826 aa23.15■■□□□ 1.3
LAMP3-205ENST00000486686 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
LAMP3-205ENST00000486686 SSFA2P28290 1259 aa23.14■■□□□ 1.29
LAMP3-205ENST00000486686 PIGBQ92521 554 aa23.14■■□□□ 1.29
LAMP3-205ENST00000486686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
LAMP3-205ENST00000486686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.29
LAMP3-205ENST00000486686 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
LAMP3-205ENST00000486686 PHF14O94880 888 aa23.11■■□□□ 1.29
LAMP3-205ENST00000486686 HSPA6P17066 643 aa23.11■■□□□ 1.29
LAMP3-205ENST00000486686 ADCY9O60503 1353 aa23.11■■□□□ 1.29
LAMP3-205ENST00000486686 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
LAMP3-205ENST00000486686 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
LAMP3-205ENST00000486686 SIK1P57059 783 aa23.1■■□□□ 1.29
LAMP3-205ENST00000486686 PANK3Q9H999 370 aa23.1■■□□□ 1.29
LAMP3-205ENST00000486686 ITGB4P16144 1822 aa23.1■■□□□ 1.29
LAMP3-205ENST00000486686 ZNF526Q8TF50 670 aaPredicted RBP23.09■■□□□ 1.29
LAMP3-205ENST00000486686 TMOD3Q9NYL9 352 aa23.09■■□□□ 1.29
LAMP3-205ENST00000486686 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
LAMP3-205ENST00000486686 PER1O15534 1290 aaPredicted RBP23.07■■□□□ 1.28
LAMP3-205ENST00000486686 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
LAMP3-205ENST00000486686 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
LAMP3-205ENST00000486686 KIF20BQ96Q89 1820 aa23.06■■□□□ 1.28
LAMP3-205ENST00000486686 ANP32CO43423 234 aa23.06■■□□□ 1.28
LAMP3-205ENST00000486686 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
LAMP3-205ENST00000486686 ATP6V1AP38606 617 aa23.05■■□□□ 1.28
LAMP3-205ENST00000486686 IFNL2Q8IZJ0 200 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms