RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 SIRT2Q8IXJ6 389 aa14.15□□□□□ -0.14
SLX4-203ENST00000486524 USP35Q9P2H5 1018 aa14.15□□□□□ -0.14
SLX4-203ENST00000486524 PIK3R4Q99570 1358 aa14.15□□□□□ -0.15
SLX4-203ENST00000486524 CHMP4BQ9H444 224 aaKnown RBP14.14□□□□□ -0.15
SLX4-203ENST00000486524 ZBTB7CA1YPR0 619 aa14.14□□□□□ -0.15
SLX4-203ENST00000486524 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
SLX4-203ENST00000486524 TSPYL4Q9UJ04 414 aa14.13□□□□□ -0.15
SLX4-203ENST00000486524 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
SLX4-203ENST00000486524 PIK3C2AO00443 1686 aa14.13□□□□□ -0.15
SLX4-203ENST00000486524 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
SLX4-203ENST00000486524 CEP170BQ9Y4F5 1589 aaPredicted RBP14.12□□□□□ -0.15
SLX4-203ENST00000486524 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
SLX4-203ENST00000486524 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
SLX4-203ENST00000486524 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
SLX4-203ENST00000486524 USHBP1Q8N6Y0 703 aa14.12□□□□□ -0.15
SLX4-203ENST00000486524 GCC1Q96CN9 775 aa14.12□□□□□ -0.15
SLX4-203ENST00000486524 HOXC9P31274 260 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 XRN1Q8IZH2 1706 aaKnown RBP14.11□□□□□ -0.15
SLX4-203ENST00000486524 FMN2Q9NZ56 1722 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 ANKLE2Q86XL3 938 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 CRB1P82279 1406 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 UBE2Q2Q8WVN8 375 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 NECTIN2Q92692 538 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 TBC1D2Q9BYX2 928 aa14.11□□□□□ -0.15
SLX4-203ENST00000486524 IGSF1Q8N6C5 1336 aa14.1□□□□□ -0.15
SLX4-203ENST00000486524 APBB1O00213 710 aa14.1□□□□□ -0.15
SLX4-203ENST00000486524 SLC4A10Q6U841 1118 aa14.1□□□□□ -0.15
SLX4-203ENST00000486524 HAP1P54257 671 aaPredicted RBP14.1□□□□□ -0.15
SLX4-203ENST00000486524 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
SLX4-203ENST00000486524 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
SLX4-203ENST00000486524 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
SLX4-203ENST00000486524 F6X3S4 739 aa14.09□□□□□ -0.15
SLX4-203ENST00000486524 G2E3Q7L622 706 aa14.09□□□□□ -0.15
SLX4-203ENST00000486524 MSH6P52701 1360 aa14.08□□□□□ -0.15
SLX4-203ENST00000486524 KIAA0232Q92628 1395 aa14.08□□□□□ -0.15
SLX4-203ENST00000486524 ANKARQ7Z5J8 1434 aa14.08□□□□□ -0.16
SLX4-203ENST00000486524 INTS3Q68E01 1043 aaKnown RBP14.08□□□□□ -0.16
SLX4-203ENST00000486524 KDRP35968 1356 aa14.08□□□□□ -0.16
SLX4-203ENST00000486524 SETD1BQ9UPS6 1966 aaKnown RBP14.08□□□□□ -0.16
SLX4-203ENST00000486524 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
SLX4-203ENST00000486524 MEIS3Q99687 375 aa14.07□□□□□ -0.16
SLX4-203ENST00000486524 RGS12O14924 1447 aa14.07□□□□□ -0.16
SLX4-203ENST00000486524 PSME1Q06323 249 aa14.07□□□□□ -0.16
SLX4-203ENST00000486524 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
SLX4-203ENST00000486524 BMP2KLQ5H9B9 411 aa14.06□□□□□ -0.16
SLX4-203ENST00000486524 PTPRCP08575 1304 aa14.06□□□□□ -0.16
SLX4-203ENST00000486524 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
SLX4-203ENST00000486524 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
SLX4-203ENST00000486524 SMARCA5O60264 1052 aaPredicted RBP14.04□□□□□ -0.16
SLX4-203ENST00000486524 CEP85Q6P2H3 762 aa14.04□□□□□ -0.16
SLX4-203ENST00000486524 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
SLX4-203ENST00000486524 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
SLX4-203ENST00000486524 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
SLX4-203ENST00000486524 TBC1D9Q6ZT07 1266 aa14.03□□□□□ -0.16
SLX4-203ENST00000486524 ANKRD44Q8N8A2 993 aa14.03□□□□□ -0.16
SLX4-203ENST00000486524 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
SLX4-203ENST00000486524 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
SLX4-203ENST00000486524 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
SLX4-203ENST00000486524 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
SLX4-203ENST00000486524 ATP10DQ9P241 1426 aa14.02□□□□□ -0.17
SLX4-203ENST00000486524 FKBP5Q13451 457 aaPredicted RBP14.02□□□□□ -0.17
SLX4-203ENST00000486524 GSE1Q14687 1217 aa14.02□□□□□ -0.17
SLX4-203ENST00000486524 ORAI2Q96SN7 254 aa14.02□□□□□ -0.17
SLX4-203ENST00000486524 PLEKHM2Q8IWE5 1019 aa14.01□□□□□ -0.17
SLX4-203ENST00000486524 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
SLX4-203ENST00000486524 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
SLX4-203ENST00000486524 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
SLX4-203ENST00000486524 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
SLX4-203ENST00000486524 RPAP2Q8IXW5 612 aaPredicted RBP14.01□□□□□ -0.17
SLX4-203ENST00000486524 LRRC59Q96AG4 307 aaKnown RBP14.01□□□□□ -0.17
SLX4-203ENST00000486524 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
SLX4-203ENST00000486524 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
SLX4-203ENST00000486524 HSCBQ8IWL3 235 aa14□□□□□ -0.17
SLX4-203ENST00000486524 NWD1Q149M9 1564 aa14□□□□□ -0.17
SLX4-203ENST00000486524 FLIIQ13045 1269 aa14□□□□□ -0.17
SLX4-203ENST00000486524 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
SLX4-203ENST00000486524 TAF7Q15545 349 aaPredicted RBP13.99□□□□□ -0.17
SLX4-203ENST00000486524 CCDC30Q5VVM6 783 aa13.99□□□□□ -0.17
SLX4-203ENST00000486524 IP6K1Q92551 441 aa13.99□□□□□ -0.17
SLX4-203ENST00000486524 LTN1O94822 1766 aa13.99□□□□□ -0.17
SLX4-203ENST00000486524 RBM25P49756 843 aaKnown RBP13.99□□□□□ -0.17
SLX4-203ENST00000486524 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
SLX4-203ENST00000486524 CDC45O75419 566 aa13.98□□□□□ -0.17
SLX4-203ENST00000486524 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
SLX4-203ENST00000486524 LGR6Q9HBX8 967 aa13.98□□□□□ -0.17
SLX4-203ENST00000486524 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
SLX4-203ENST00000486524 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
SLX4-203ENST00000486524 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
SLX4-203ENST00000486524 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.17
SLX4-203ENST00000486524 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
SLX4-203ENST00000486524 EXOC6BQ9Y2D4 811 aa13.96□□□□□ -0.17
SLX4-203ENST00000486524 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.18
SLX4-203ENST00000486524 HMMRO75330 724 aa13.96□□□□□ -0.18
SLX4-203ENST00000486524 GNAI2P04899 355 aa13.96□□□□□ -0.18
SLX4-203ENST00000486524 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.18
SLX4-203ENST00000486524 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.18
SLX4-203ENST00000486524 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.18
SLX4-203ENST00000486524 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
SLX4-203ENST00000486524 GCP02774 474 aa13.95□□□□□ -0.18
SLX4-203ENST00000486524 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms