RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 OTUD7AQ8TE49 926 aaPredicted RBP27.8■■■□□ 2.04
CLN5-202ENST00000485938 CCDC61Q9Y6R9 512 aa27.8■■■□□ 2.04
CLN5-202ENST00000485938 AKAP12Q02952 1782 aa27.8■■■□□ 2.04
CLN5-202ENST00000485938 METP08581 1390 aa27.8■■■□□ 2.04
CLN5-202ENST00000485938 IBTKQ9P2D0 1353 aaPredicted RBP27.8■■■□□ 2.04
CLN5-202ENST00000485938 KRT24Q2M2I5 525 aa27.79■■■□□ 2.04
CLN5-202ENST00000485938 UBE2Q2Q8WVN8 375 aa27.79■■■□□ 2.04
CLN5-202ENST00000485938 PPP6R1Q9UPN7 881 aa27.79■■■□□ 2.04
CLN5-202ENST00000485938 TRIM44Q96DX7 344 aaPredicted RBP27.79■■■□□ 2.04
CLN5-202ENST00000485938 AK9Q5TCS8 1911 aa27.79■■■□□ 2.04
CLN5-202ENST00000485938 CHL1O00533 1208 aa27.78■■■□□ 2.04
CLN5-202ENST00000485938 HAP1P54257 671 aaPredicted RBP27.78■■■□□ 2.04
CLN5-202ENST00000485938 AEBP1Q8IUX7 1158 aa27.78■■■□□ 2.04
CLN5-202ENST00000485938 TXNDC2Q86VQ3 553 aa27.78■■■□□ 2.04
CLN5-202ENST00000485938 RTL1A6NKG5 1358 aa27.77■■■□□ 2.04
CLN5-202ENST00000485938 AGLP35573 1532 aa27.77■■■□□ 2.04
CLN5-202ENST00000485938 SDSP20132 328 aa27.76■■■□□ 2.04
CLN5-202ENST00000485938 DDX49Q9Y6V7 483 aaKnown RBP27.76■■■□□ 2.04
CLN5-202ENST00000485938 MSH6P52701 1360 aa27.76■■■□□ 2.04
CLN5-202ENST00000485938 KIAA0232Q92628 1395 aa27.76■■■□□ 2.04
CLN5-202ENST00000485938 ITSN1Q15811 1721 aa27.76■■■□□ 2.03
CLN5-202ENST00000485938 CYP2E1P05181 493 aaPredicted RBP27.76■■■□□ 2.03
CLN5-202ENST00000485938 NUCB2P80303 420 aa27.75■■■□□ 2.03
CLN5-202ENST00000485938 EIF4A2Q14240 407 aaKnown RBP27.75■■■□□ 2.03
CLN5-202ENST00000485938 SULT6B1Q6IMI4 303 aa27.75■■■□□ 2.03
CLN5-202ENST00000485938 PTPRCP08575 1304 aa27.74■■■□□ 2.03
CLN5-202ENST00000485938 SMARCA5O60264 1052 aaPredicted RBP27.73■■■□□ 2.03
CLN5-202ENST00000485938 CASC1Q6TDU7 716 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 SIRT1Q96EB6 747 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 PPP1R9BQ96SB3 815 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 MEIS3Q99687 375 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 TECPR2O15040 1411 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 NASPP49321 788 aaPredicted RBP27.72■■■□□ 2.03
CLN5-202ENST00000485938 CCDC173Q0VFZ6 552 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 MCM10Q7L590 875 aa27.72■■■□□ 2.03
CLN5-202ENST00000485938 MCTP1Q6DN14 999 aa27.7■■■□□ 2.03
CLN5-202ENST00000485938 PRR36Q9H6K5 1346 aa27.7■■■□□ 2.03
CLN5-202ENST00000485938 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
CLN5-202ENST00000485938 CWC22Q9HCG8 908 aaKnown RBP27.69■■■□□ 2.02
CLN5-202ENST00000485938 APBB1O00213 710 aa27.69■■■□□ 2.02
CLN5-202ENST00000485938 ZNF445P59923 1031 aa27.68■■■□□ 2.02
CLN5-202ENST00000485938 PKP1Q13835 747 aa27.68■■■□□ 2.02
CLN5-202ENST00000485938 LMBRD1Q9NUN5 540 aa27.68■■■□□ 2.02
CLN5-202ENST00000485938 ST18O60284 1047 aa27.68■■■□□ 2.02
CLN5-202ENST00000485938 REC8O95072 547 aa27.67■■■□□ 2.02
CLN5-202ENST00000485938 CRB1P82279 1406 aa27.66■■■□□ 2.02
CLN5-202ENST00000485938 RGPD1P0DJD0 1748 aa27.65■■■□□ 2.02
CLN5-202ENST00000485938 ZGPATQ8N5A5 531 aaKnown RBP27.64■■■□□ 2.02
CLN5-202ENST00000485938 TTC21BQ7Z4L5 1316 aa27.64■■■□□ 2.02
CLN5-202ENST00000485938 OVOS2A0A0J9YW53 1432 aa27.64■■■□□ 2.02
CLN5-202ENST00000485938 OVOS2Q6IE36 1432 aa27.64■■■□□ 2.02
CLN5-202ENST00000485938 SLC4A2P04920 1241 aa27.64■■■□□ 2.02
CLN5-202ENST00000485938 ERC2O15083 957 aa27.63■■■□□ 2.01
CLN5-202ENST00000485938 OSBPL3Q9H4L5 887 aa27.63■■■□□ 2.01
CLN5-202ENST00000485938 HMMRO75330 724 aa27.63■■■□□ 2.01
CLN5-202ENST00000485938 CAVIN1Q6NZI2 390 aaKnown RBP27.63■■■□□ 2.01
CLN5-202ENST00000485938 PEAK1Q9H792 1746 aa27.63■■■□□ 2.01
CLN5-202ENST00000485938 ZSCAN23Q3MJ62 389 aa27.62■■■□□ 2.01
CLN5-202ENST00000485938 ANP32BQ92688 251 aaKnown RBP27.62■■■□□ 2.01
CLN5-202ENST00000485938 ZDHHC9Q9Y397 364 aa27.62■■■□□ 2.01
CLN5-202ENST00000485938 HSP90AB2PQ58FF8 381 aa27.61■■■□□ 2.01
CLN5-202ENST00000485938 NCLP19338 710 aaKnown RBP27.59■■■□□ 2.01
CLN5-202ENST00000485938 PDE1AP54750 535 aa27.59■■■□□ 2.01
CLN5-202ENST00000485938 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
CLN5-202ENST00000485938 ZSCAN30Q86W11 494 aa27.58■■■□□ 2.01
CLN5-202ENST00000485938 G2E3Q7L622 706 aa27.58■■■□□ 2.01
CLN5-202ENST00000485938 CCT4P50991 539 aaKnown RBP27.57■■■□□ 2
CLN5-202ENST00000485938 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
CLN5-202ENST00000485938 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
CLN5-202ENST00000485938 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
CLN5-202ENST00000485938 ACEP12821 1306 aa27.57■■■□□ 2
CLN5-202ENST00000485938 TOPAZ1Q8N9V7 1692 aa27.56■■■□□ 2
CLN5-202ENST00000485938 PRPF40AO75400 957 aaKnown RBP27.56■■■□□ 2
CLN5-202ENST00000485938 F6X3S4 739 aa27.56■■■□□ 2
CLN5-202ENST00000485938 GPT2Q8TD30 523 aa27.56■■■□□ 2
CLN5-202ENST00000485938 SLC4A10Q6U841 1118 aa27.55■■■□□ 2
CLN5-202ENST00000485938 USP31Q70CQ4 1352 aa27.55■■■□□ 2
CLN5-202ENST00000485938 RBSNQ9H1K0 784 aa27.54■■■□□ 2
CLN5-202ENST00000485938 USP6P35125 1406 aa27.54■■■□□ 2
CLN5-202ENST00000485938 ARHGEF10O15013 1369 aa27.54■■■□□ 2
CLN5-202ENST00000485938 SALL3Q9BXA9 1300 aa27.54■■■□□ 2
CLN5-202ENST00000485938 PLEKHG3A1L390 1219 aa27.53■■■□□ 2
CLN5-202ENST00000485938 FOXO3O43524 673 aa27.53■■■□□ 2
CLN5-202ENST00000485938 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
CLN5-202ENST00000485938 TSPYL4Q9UJ04 414 aa27.53■■■□□ 2
CLN5-202ENST00000485938 TUBGCP6Q96RT7 1819 aa27.52■■■□□ 2
CLN5-202ENST00000485938 MAP3K19Q56UN5 1328 aa27.52■■■□□ 2
CLN5-202ENST00000485938 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.52■■■□□ 2
CLN5-202ENST00000485938 GNAI2P04899 355 aa27.51■■□□□ 1.99
CLN5-202ENST00000485938 PRIM1P49642 420 aaKnown RBP27.51■■□□□ 1.99
CLN5-202ENST00000485938 MTHFSDQ2M296 383 aaKnown RBP27.51■■□□□ 1.99
CLN5-202ENST00000485938 RBM27Q9P2N5 1060 aaKnown RBP27.51■■□□□ 1.99
CLN5-202ENST00000485938 RRP9O43818 475 aaKnown RBP27.5■■□□□ 1.99
CLN5-202ENST00000485938 NEK4P51957 841 aa27.5■■□□□ 1.99
CLN5-202ENST00000485938 TMX3Q96JJ7 454 aa27.5■■□□□ 1.99
CLN5-202ENST00000485938 EXOC6BQ9Y2D4 811 aa27.5■■□□□ 1.99
CLN5-202ENST00000485938 ESYT1Q9BSJ8 1104 aa27.5■■□□□ 1.99
CLN5-202ENST00000485938 HS1BP3Q53T59 392 aa27.49■■□□□ 1.99
CLN5-202ENST00000485938 RTF1Q92541 710 aaKnown RBP27.49■■□□□ 1.99
CLN5-202ENST00000485938 PDLIM2Q96JY6 352 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms