RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 PARD3Q8TEW0 1356 aa23.61■■□□□ 1.37
TSSC4-209ENST00000485682 DIAPH1O60610 1272 aaKnown RBP23.6■■□□□ 1.37
TSSC4-209ENST00000485682 BAG6P46379 1132 aa23.6■■□□□ 1.37
TSSC4-209ENST00000485682 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
TSSC4-209ENST00000485682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSSC4-209ENST00000485682 PLEKHG2Q9H7P9 1386 aa23.58■■□□□ 1.37
TSSC4-209ENST00000485682 BCL11BQ9C0K0 894 aaPredicted RBP23.58■■□□□ 1.37
TSSC4-209ENST00000485682 SHANK3Q9BYB0 1731 aa23.58■■□□□ 1.37
TSSC4-209ENST00000485682 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
TSSC4-209ENST00000485682 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-209ENST00000485682 APBA3O96018 575 aa23.57■■□□□ 1.36
TSSC4-209ENST00000485682 CFAP53Q96M91 514 aa23.57■■□□□ 1.36
TSSC4-209ENST00000485682 PCDH11XQ9BZA7 1347 aa23.57■■□□□ 1.36
TSSC4-209ENST00000485682 PCDH11YQ9BZA8 1340 aa23.57■■□□□ 1.36
TSSC4-209ENST00000485682 KDRP35968 1356 aa23.56■■□□□ 1.36
TSSC4-209ENST00000485682 RALBP1Q15311 655 aa23.56■■□□□ 1.36
TSSC4-209ENST00000485682 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
TSSC4-209ENST00000485682 AEBP1Q8IUX7 1158 aa23.56■■□□□ 1.36
TSSC4-209ENST00000485682 SPG7Q9UQ90 795 aa23.56■■□□□ 1.36
TSSC4-209ENST00000485682 EN1Q05925 392 aaPredicted RBP23.55■■□□□ 1.36
TSSC4-209ENST00000485682 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
TSSC4-209ENST00000485682 PKD1L3Q7Z443 1732 aa23.55■■□□□ 1.36
TSSC4-209ENST00000485682 KAT6BQ8WYB5 2073 aa23.55■■□□□ 1.36
TSSC4-209ENST00000485682 CYP27B1O15528 508 aa23.54■■□□□ 1.36
TSSC4-209ENST00000485682 KCNQ2O43526 872 aa23.53■■□□□ 1.36
TSSC4-209ENST00000485682 ACSBG1Q96GR2 724 aa23.53■■□□□ 1.36
TSSC4-209ENST00000485682 CAMKK2Q96RR4 588 aa23.52■■□□□ 1.36
TSSC4-209ENST00000485682 PLEKHO1Q53GL0 409 aaPredicted RBP23.51■■□□□ 1.35
TSSC4-209ENST00000485682 AMOTQ4VCS5 1084 aa23.5■■□□□ 1.35
TSSC4-209ENST00000485682 NHSQ6T4R5 1651 aa23.5■■□□□ 1.35
TSSC4-209ENST00000485682 U2SURPO15042 1029 aaKnown RBP23.49■■□□□ 1.35
TSSC4-209ENST00000485682 PLSCR1O15162 318 aa23.49■■□□□ 1.35
TSSC4-209ENST00000485682 HMOX1P09601 288 aa23.49■■□□□ 1.35
TSSC4-209ENST00000485682 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
TSSC4-209ENST00000485682 EZH2Q15910 746 aaKnown RBP23.49■■□□□ 1.35
TSSC4-209ENST00000485682 IFNL2Q8IZJ0 200 aa23.49■■□□□ 1.35
TSSC4-209ENST00000485682 NUDCQ9Y266 331 aa23.48■■□□□ 1.35
TSSC4-209ENST00000485682 PHKG2P15735 406 aa23.47■■□□□ 1.35
TSSC4-209ENST00000485682 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
TSSC4-209ENST00000485682 SYTL4Q96C24 671 aaPredicted RBP23.45■■□□□ 1.34
TSSC4-209ENST00000485682 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
TSSC4-209ENST00000485682 ZNF530Q6P9A1 599 aaPredicted RBP23.44■■□□□ 1.34
TSSC4-209ENST00000485682 DOT1LQ8TEK3 1739 aa23.44■■□□□ 1.34
TSSC4-209ENST00000485682 MYBBP1AQ9BQG0 1328 aaKnown RBP23.43■■□□□ 1.34
TSSC4-209ENST00000485682 BTAF1O14981 1849 aa23.42■■□□□ 1.34
TSSC4-209ENST00000485682 RGPD3A6NKT7 1758 aaPredicted RBP23.42■■□□□ 1.34
TSSC4-209ENST00000485682 RGPD4Q7Z3J3 1758 aa23.42■■□□□ 1.34
TSSC4-209ENST00000485682 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
TSSC4-209ENST00000485682 U2AF1L5P0DN76 240 aaPredicted RBP23.4■■□□□ 1.34
TSSC4-209ENST00000485682 U2AF1Q01081 240 aaKnown RBP eCLIP23.4■■□□□ 1.34
TSSC4-209ENST00000485682 PROM2Q8N271 834 aa23.4■■□□□ 1.34
TSSC4-209ENST00000485682 C1orf141Q5JVX7 400 aa23.39■■□□□ 1.33
TSSC4-209ENST00000485682 DCAF5Q96JK2 942 aa23.39■■□□□ 1.33
TSSC4-209ENST00000485682 RSPH6AQ9H0K4 717 aa23.39■■□□□ 1.33
TSSC4-209ENST00000485682 RREB1Q92766 1687 aa23.38■■□□□ 1.33
TSSC4-209ENST00000485682 FCHSD2O94868 740 aa23.38■■□□□ 1.33
TSSC4-209ENST00000485682 TXNRD1Q16881 649 aa23.38■■□□□ 1.33
TSSC4-209ENST00000485682 MPRIPQ6WCQ1 1025 aa23.38■■□□□ 1.33
TSSC4-209ENST00000485682 TOGARAM1Q9Y4F4 1720 aa23.38■■□□□ 1.33
TSSC4-209ENST00000485682 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
TSSC4-209ENST00000485682 PRKAR2BP31323 418 aa23.36■■□□□ 1.33
TSSC4-209ENST00000485682 AKAP4Q5JQC9 854 aa23.36■■□□□ 1.33
TSSC4-209ENST00000485682 ITGB4P16144 1822 aa23.36■■□□□ 1.33
TSSC4-209ENST00000485682 ERVV-2B6SEH9 535 aa23.35■■□□□ 1.33
TSSC4-209ENST00000485682 PIGBQ92521 554 aa23.34■■□□□ 1.33
TSSC4-209ENST00000485682 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.33
TSSC4-209ENST00000485682 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.33
TSSC4-209ENST00000485682 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
TSSC4-209ENST00000485682 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
TSSC4-209ENST00000485682 TMOD3Q9NYL9 352 aa23.33■■□□□ 1.33
TSSC4-209ENST00000485682 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
TSSC4-209ENST00000485682 SLC27A3Q5K4L6 730 aa23.3■■□□□ 1.32
TSSC4-209ENST00000485682 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-209ENST00000485682 CABP4P57796 275 aa23.29■■□□□ 1.32
TSSC4-209ENST00000485682 LY75O60449 1722 aa23.28■■□□□ 1.32
TSSC4-209ENST00000485682 LRRC4BQ9NT99 713 aa23.28■■□□□ 1.32
TSSC4-209ENST00000485682 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
TSSC4-209ENST00000485682 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
TSSC4-209ENST00000485682 RNMTO43148 476 aaKnown RBP23.27■■□□□ 1.32
TSSC4-209ENST00000485682 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
TSSC4-209ENST00000485682 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
TSSC4-209ENST00000485682 LGR6Q9HBX8 967 aa23.27■■□□□ 1.32
TSSC4-209ENST00000485682 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
TSSC4-209ENST00000485682 PSDA5PKW4 1024 aaPredicted RBP23.26■■□□□ 1.31
TSSC4-209ENST00000485682 ANP32CO43423 234 aa23.26■■□□□ 1.31
TSSC4-209ENST00000485682 NFATC2IPQ8NCF5 419 aa23.26■■□□□ 1.31
TSSC4-209ENST00000485682 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
TSSC4-209ENST00000485682 ANO8Q9HCE9 1232 aaPredicted RBP23.25■■□□□ 1.31
TSSC4-209ENST00000485682 ATG3Q9NT62 314 aa23.25■■□□□ 1.31
TSSC4-209ENST00000485682 CCNL1Q9UK58 526 aaPredicted RBP23.25■■□□□ 1.31
TSSC4-209ENST00000485682 ASAP1Q9ULH1 1129 aa23.25■■□□□ 1.31
TSSC4-209ENST00000485682 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
TSSC4-209ENST00000485682 NEFMP07197 916 aa23.24■■□□□ 1.31
TSSC4-209ENST00000485682 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
TSSC4-209ENST00000485682 ADAMTS7Q9UKP4 1686 aa23.23■■□□□ 1.31
TSSC4-209ENST00000485682 KCNQ4P56696 695 aa23.22■■□□□ 1.31
TSSC4-209ENST00000485682 SLC15A2Q16348 729 aa23.22■■□□□ 1.31
TSSC4-209ENST00000485682 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
TSSC4-209ENST00000485682 STK32BQ9NY57 414 aa23.22■■□□□ 1.31
TSSC4-209ENST00000485682 HMGB2P26583 209 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms