RNA–Protein interactions for RNA: ENST00000485522.3

RN7SL344P-201, Transcript of RNA, 7SL, cytoplasmic 344, pseudogene, humanhuman

BASIC

Gene RN7SL344P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL344P-201ENST00000485522 IL13P35225 146 aa13.16□□□□□ -0.3
RN7SL344P-201ENST00000485522 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
RN7SL344P-201ENST00000485522 CFAP53Q96M91 514 aa13.16□□□□□ -0.3
RN7SL344P-201ENST00000485522 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
RN7SL344P-201ENST00000485522 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
RN7SL344P-201ENST00000485522 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
RN7SL344P-201ENST00000485522 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
RN7SL344P-201ENST00000485522 KDRP35968 1356 aa13.15□□□□□ -0.3
RN7SL344P-201ENST00000485522 DIAPH1O60610 1272 aaKnown RBP13.14□□□□□ -0.31
RN7SL344P-201ENST00000485522 BAG6P46379 1132 aa13.14□□□□□ -0.31
RN7SL344P-201ENST00000485522 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
RN7SL344P-201ENST00000485522 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
RN7SL344P-201ENST00000485522 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 HMGB2P26583 209 aaKnown RBP13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 PPP2R1AP30153 589 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 MEGF6O75095 1541 aa13.13□□□□□ -0.31
RN7SL344P-201ENST00000485522 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
RN7SL344P-201ENST00000485522 PLSCR1O15162 318 aa13.12□□□□□ -0.31
RN7SL344P-201ENST00000485522 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
RN7SL344P-201ENST00000485522 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
RN7SL344P-201ENST00000485522 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
RN7SL344P-201ENST00000485522 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
RN7SL344P-201ENST00000485522 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
RN7SL344P-201ENST00000485522 TRIM37O94972 964 aa13.1□□□□□ -0.31
RN7SL344P-201ENST00000485522 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
RN7SL344P-201ENST00000485522 USHBP1Q8N6Y0 703 aa13.1□□□□□ -0.31
RN7SL344P-201ENST00000485522 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
RN7SL344P-201ENST00000485522 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
RN7SL344P-201ENST00000485522 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
RN7SL344P-201ENST00000485522 SULT6B1Q6IMI4 303 aa13.09□□□□□ -0.31
RN7SL344P-201ENST00000485522 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
RN7SL344P-201ENST00000485522 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
RN7SL344P-201ENST00000485522 NHSQ6T4R5 1651 aa13.08□□□□□ -0.31
RN7SL344P-201ENST00000485522 APBA3O96018 575 aa13.08□□□□□ -0.32
RN7SL344P-201ENST00000485522 CYP27B1O15528 508 aa13.07□□□□□ -0.32
RN7SL344P-201ENST00000485522 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
RN7SL344P-201ENST00000485522 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
RN7SL344P-201ENST00000485522 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
RN7SL344P-201ENST00000485522 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
RN7SL344P-201ENST00000485522 FCHSD2O94868 740 aa13.06□□□□□ -0.32
RN7SL344P-201ENST00000485522 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
RN7SL344P-201ENST00000485522 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
RN7SL344P-201ENST00000485522 PHKG2P15735 406 aa13.05□□□□□ -0.32
RN7SL344P-201ENST00000485522 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
RN7SL344P-201ENST00000485522 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
RN7SL344P-201ENST00000485522 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
RN7SL344P-201ENST00000485522 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
RN7SL344P-201ENST00000485522 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
RN7SL344P-201ENST00000485522 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
RN7SL344P-201ENST00000485522 BTAF1O14981 1849 aa13.02□□□□□ -0.32
RN7SL344P-201ENST00000485522 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 KCNQ2O43526 872 aa13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 ZNF530Q6P9A1 599 aaPredicted RBP13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.33
RN7SL344P-201ENST00000485522 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 DOT1LQ8TEK3 1739 aa13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 ITGB4P16144 1822 aa13.01□□□□□ -0.33
RN7SL344P-201ENST00000485522 HTATSF1O43719 755 aaKnown RBP13□□□□□ -0.33
RN7SL344P-201ENST00000485522 NEFMP07197 916 aa13□□□□□ -0.33
RN7SL344P-201ENST00000485522 HMOX1P09601 288 aa13□□□□□ -0.33
RN7SL344P-201ENST00000485522 ACSBG1Q96GR2 724 aa13□□□□□ -0.33
RN7SL344P-201ENST00000485522 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
RN7SL344P-201ENST00000485522 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
RN7SL344P-201ENST00000485522 PROM2Q8N271 834 aa12.98□□□□□ -0.33
RN7SL344P-201ENST00000485522 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
RN7SL344P-201ENST00000485522 SCN11AQ9UI33 1791 aa12.98□□□□□ -0.33
RN7SL344P-201ENST00000485522 LY75O60449 1722 aa12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 ANP32CO43423 234 aa12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 PIGBQ92521 554 aa12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
RN7SL344P-201ENST00000485522 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
RN7SL344P-201ENST00000485522 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
RN7SL344P-201ENST00000485522 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.34
RN7SL344P-201ENST00000485522 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
RN7SL344P-201ENST00000485522 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
RN7SL344P-201ENST00000485522 CABP4P57796 275 aa12.95□□□□□ -0.34
RN7SL344P-201ENST00000485522 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
RN7SL344P-201ENST00000485522 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
RN7SL344P-201ENST00000485522 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
RN7SL344P-201ENST00000485522 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
RN7SL344P-201ENST00000485522 KDM6AO15550 1401 aaPredicted RBP12.94□□□□□ -0.34
RN7SL344P-201ENST00000485522 VIRMAQ69YN4 1812 aaKnown RBP12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 MRC1P22897 1456 aa12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 PHACTR3Q96KR7 559 aa12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
RN7SL344P-201ENST00000485522 RTF1Q92541 710 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms