RNA–Protein interactions for RNA: ENST00000485448.1

PLD3-211, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 1,308 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-211ENST00000485448 ANKRD26Q9UPS8 1709 aa23.46■■□□□ 1.35
PLD3-211ENST00000485448 HMGB2P26583 209 aaKnown RBP23.45■■□□□ 1.34
PLD3-211ENST00000485448 EIF4A2Q14240 407 aaKnown RBP23.45■■□□□ 1.34
PLD3-211ENST00000485448 PLEKHG2Q9H7P9 1386 aa23.45■■□□□ 1.34
PLD3-211ENST00000485448 PCDH11XQ9BZA7 1347 aa23.45■■□□□ 1.34
PLD3-211ENST00000485448 PCDH11YQ9BZA8 1340 aa23.45■■□□□ 1.34
PLD3-211ENST00000485448 MAP2P11137 1827 aaKnown RBP23.44■■□□□ 1.34
PLD3-211ENST00000485448 ACSBG1Q96GR2 724 aa23.44■■□□□ 1.34
PLD3-211ENST00000485448 KCNQ2O43526 872 aa23.43■■□□□ 1.34
PLD3-211ENST00000485448 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
PLD3-211ENST00000485448 MEGF6O75095 1541 aa23.41■■□□□ 1.34
PLD3-211ENST00000485448 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
PLD3-211ENST00000485448 MTHFSP49914 203 aa23.39■■□□□ 1.34
PLD3-211ENST00000485448 TXNRD1Q16881 649 aa23.39■■□□□ 1.34
PLD3-211ENST00000485448 PTF1AQ7RTS3 328 aa23.39■■□□□ 1.34
PLD3-211ENST00000485448 IGSF1Q8N6C5 1336 aa23.39■■□□□ 1.33
PLD3-211ENST00000485448 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
PLD3-211ENST00000485448 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
PLD3-211ENST00000485448 R3HDM1Q15032 1099 aaKnown RBP23.38■■□□□ 1.33
PLD3-211ENST00000485448 SYTL4Q96C24 671 aaPredicted RBP23.38■■□□□ 1.33
PLD3-211ENST00000485448 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
PLD3-211ENST00000485448 AMOTQ4VCS5 1084 aa23.37■■□□□ 1.33
PLD3-211ENST00000485448 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
PLD3-211ENST00000485448 PROM2Q8N271 834 aa23.36■■□□□ 1.33
PLD3-211ENST00000485448 ADRA2BP18089 450 aa23.35■■□□□ 1.33
PLD3-211ENST00000485448 NKX1-1Q15270 411 aaPredicted RBP23.35■■□□□ 1.33
PLD3-211ENST00000485448 PLEKHO1Q53GL0 409 aaPredicted RBP23.35■■□□□ 1.33
PLD3-211ENST00000485448 SLC27A3Q5K4L6 730 aa23.35■■□□□ 1.33
PLD3-211ENST00000485448 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
PLD3-211ENST00000485448 RGPD3A6NKT7 1758 aaPredicted RBP23.35■■□□□ 1.33
PLD3-211ENST00000485448 RGPD2P0DJD1 1756 aa23.35■■□□□ 1.33
PLD3-211ENST00000485448 RGPD4Q7Z3J3 1758 aa23.35■■□□□ 1.33
PLD3-211ENST00000485448 CYP27B1O15528 508 aa23.33■■□□□ 1.33
PLD3-211ENST00000485448 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.33
PLD3-211ENST00000485448 IL13P35225 146 aa23.33■■□□□ 1.33
PLD3-211ENST00000485448 NHSQ6T4R5 1651 aa23.33■■□□□ 1.33
PLD3-211ENST00000485448 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.32
PLD3-211ENST00000485448 STK32BQ9NY57 414 aa23.33■■□□□ 1.32
PLD3-211ENST00000485448 SULT6B1Q6IMI4 303 aa23.3■■□□□ 1.32
PLD3-211ENST00000485448 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
PLD3-211ENST00000485448 PHKG2P15735 406 aa23.29■■□□□ 1.32
PLD3-211ENST00000485448 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
PLD3-211ENST00000485448 RREB1Q92766 1687 aa23.29■■□□□ 1.32
PLD3-211ENST00000485448 SLC15A2Q16348 729 aa23.28■■□□□ 1.32
PLD3-211ENST00000485448 CNGB1Q14028 1251 aaPredicted RBP23.27■■□□□ 1.32
PLD3-211ENST00000485448 MPRIPQ6WCQ1 1025 aa23.27■■□□□ 1.32
PLD3-211ENST00000485448 KDRP35968 1356 aa23.26■■□□□ 1.31
PLD3-211ENST00000485448 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
PLD3-211ENST00000485448 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
PLD3-211ENST00000485448 DCAF5Q96JK2 942 aa23.26■■□□□ 1.31
PLD3-211ENST00000485448 ERVV-2B6SEH9 535 aa23.24■■□□□ 1.31
PLD3-211ENST00000485448 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
PLD3-211ENST00000485448 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
PLD3-211ENST00000485448 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
PLD3-211ENST00000485448 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
PLD3-211ENST00000485448 SPON1Q9HCB6 807 aa23.22■■□□□ 1.31
PLD3-211ENST00000485448 CCNL1Q9UK58 526 aaPredicted RBP23.22■■□□□ 1.31
PLD3-211ENST00000485448 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
PLD3-211ENST00000485448 AEBP1Q8IUX7 1158 aa23.21■■□□□ 1.31
PLD3-211ENST00000485448 LRRC4BQ9NT99 713 aa23.21■■□□□ 1.31
PLD3-211ENST00000485448 SHANK3Q9BYB0 1731 aa23.21■■□□□ 1.31
PLD3-211ENST00000485448 BTAF1O14981 1849 aa23.21■■□□□ 1.31
PLD3-211ENST00000485448 PIGBQ92521 554 aa23.2■■□□□ 1.3
PLD3-211ENST00000485448 ANO8Q9HCE9 1232 aaPredicted RBP23.2■■□□□ 1.3
PLD3-211ENST00000485448 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
PLD3-211ENST00000485448 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
PLD3-211ENST00000485448 HMOX1P09601 288 aa23.17■■□□□ 1.3
PLD3-211ENST00000485448 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
PLD3-211ENST00000485448 DOT1LQ8TEK3 1739 aa23.17■■□□□ 1.3
PLD3-211ENST00000485448 CABP4P57796 275 aa23.16■■□□□ 1.3
PLD3-211ENST00000485448 AKT1S1Q96B36 256 aa23.16■■□□□ 1.3
PLD3-211ENST00000485448 PALLDQ8WX93 1383 aa23.15■■□□□ 1.3
PLD3-211ENST00000485448 SLC16A10Q8TF71 515 aa23.15■■□□□ 1.3
PLD3-211ENST00000485448 TFCP2L1Q9NZI6 479 aa23.15■■□□□ 1.3
PLD3-211ENST00000485448 LRP5O75197 1615 aa23.13■■□□□ 1.29
PLD3-211ENST00000485448 RALBP1Q15311 655 aa23.13■■□□□ 1.29
PLD3-211ENST00000485448 FLAD1Q8NFF5 587 aa23.13■■□□□ 1.29
PLD3-211ENST00000485448 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
PLD3-211ENST00000485448 MTFR1LQ9H019 292 aa23.12■■□□□ 1.29
PLD3-211ENST00000485448 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
PLD3-211ENST00000485448 PPP1R1BQ9UD71 204 aaPredicted RBP23.11■■□□□ 1.29
PLD3-211ENST00000485448 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
PLD3-211ENST00000485448 FCHSD2O94868 740 aa23.1■■□□□ 1.29
PLD3-211ENST00000485448 SIK1P57059 783 aa23.1■■□□□ 1.29
PLD3-211ENST00000485448 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
PLD3-211ENST00000485448 ASAP1Q9ULH1 1129 aa23.09■■□□□ 1.29
PLD3-211ENST00000485448 KCNQ4P56696 695 aa23.08■■□□□ 1.29
PLD3-211ENST00000485448 ZNF827Q17R98 1081 aa23.08■■□□□ 1.29
PLD3-211ENST00000485448 MTHFSDQ2M296 383 aaKnown RBP23.08■■□□□ 1.29
PLD3-211ENST00000485448 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.28
PLD3-211ENST00000485448 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.28
PLD3-211ENST00000485448 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.28
PLD3-211ENST00000485448 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.28
PLD3-211ENST00000485448 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.28
PLD3-211ENST00000485448 COL3A1P02461 1466 aaPredicted RBP23.07■■□□□ 1.28
PLD3-211ENST00000485448 LY75O60449 1722 aa23.07■■□□□ 1.28
PLD3-211ENST00000485448 ZBTB7AO95365 584 aa23.07■■□□□ 1.28
PLD3-211ENST00000485448 NEFMP07197 916 aa23.07■■□□□ 1.28
PLD3-211ENST00000485448 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
PLD3-211ENST00000485448 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms