RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 SALL2Q9Y467 1007 aaPredicted RBP15.19■□□□□ 0.02
RFTN1-210ENST00000484752 IL2RBP14784 551 aa15.18■□□□□ 0.02
RFTN1-210ENST00000484752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.18■□□□□ 0.02
RFTN1-210ENST00000484752 USP21Q9UK80 565 aa15.18■□□□□ 0.02
RFTN1-210ENST00000484752 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
RFTN1-210ENST00000484752 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
RFTN1-210ENST00000484752 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
RFTN1-210ENST00000484752 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
RFTN1-210ENST00000484752 NRAPQ86VF7 1730 aa15.17■□□□□ 0.02
RFTN1-210ENST00000484752 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
RFTN1-210ENST00000484752 VPS72Q15906 364 aa15.16■□□□□ 0.02
RFTN1-210ENST00000484752 ILDR2Q71H61 639 aa15.16■□□□□ 0.02
RFTN1-210ENST00000484752 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
RFTN1-210ENST00000484752 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
RFTN1-210ENST00000484752 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
RFTN1-210ENST00000484752 WWC1Q8IX03 1113 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 RGPD2P0DJD1 1756 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 OVOS2A0A0G2JMS6 1433 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 AFF2P51816 1311 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 SPATA31A1Q5TZJ5 1347 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 SPATA31A5Q5VU36 1347 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 SPATA31A7Q8IWB4 1347 aa15.15■□□□□ 0.02
RFTN1-210ENST00000484752 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
RFTN1-210ENST00000484752 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 GNAT3A8MTJ3 354 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
RFTN1-210ENST00000484752 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 AKAP4Q5JQC9 854 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 TRPC5Q9UL62 973 aaPredicted RBP15.14■□□□□ 0.01
RFTN1-210ENST00000484752 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
RFTN1-210ENST00000484752 MEGF6O75095 1541 aa15.13■□□□□ 0.01
RFTN1-210ENST00000484752 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
RFTN1-210ENST00000484752 ZNF772Q68DY9 489 aaPredicted RBP15.13■□□□□ 0.01
RFTN1-210ENST00000484752 E9PSI1 815 aa15.12■□□□□ 0.01
RFTN1-210ENST00000484752 BARGINQ6ZT62 677 aa15.12■□□□□ 0.01
RFTN1-210ENST00000484752 IFNL2Q8IZJ0 200 aa15.12■□□□□ 0.01
RFTN1-210ENST00000484752 ZCRB1Q8TBF4 217 aaKnown RBP15.12■□□□□ 0.01
RFTN1-210ENST00000484752 IL16Q14005 1332 aa15.12■□□□□ 0.01
RFTN1-210ENST00000484752 MYH16Q9H6N6 1097 aa15.11■□□□□ 0.01
RFTN1-210ENST00000484752 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
RFTN1-210ENST00000484752 EXOC5O00471 708 aa15.1■□□□□ 0.01
RFTN1-210ENST00000484752 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
RFTN1-210ENST00000484752 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
RFTN1-210ENST00000484752 PKD1L3Q7Z443 1732 aa15.09■□□□□ 0.01
RFTN1-210ENST00000484752 ATRNO75882 1429 aa15.09■□□□□ 0.01
RFTN1-210ENST00000484752 A0A0G2JS52 829 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 PHKG2P15735 406 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 GNAI1P63096 354 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 MYT1Q01538 1121 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 DDB1Q16531 1140 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 TNS2Q63HR2 1409 aa15.08■□□□□ 0
RFTN1-210ENST00000484752 DCAF5Q96JK2 942 aa15.07■□□□□ 0
RFTN1-210ENST00000484752 GJD4Q96KN9 370 aaPredicted RBP15.07■□□□□ 0
RFTN1-210ENST00000484752 IFT57Q9NWB7 429 aa15.07■□□□□ 0
RFTN1-210ENST00000484752 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
RFTN1-210ENST00000484752 TEFQ10587 303 aa15.06■□□□□ 0
RFTN1-210ENST00000484752 MCM10Q7L590 875 aa15.06■□□□□ 0
RFTN1-210ENST00000484752 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
RFTN1-210ENST00000484752 SLFN5Q08AF3 891 aa15.05■□□□□ -0
RFTN1-210ENST00000484752 FAM98CQ17RN3 349 aaKnown RBP15.05■□□□□ -0
RFTN1-210ENST00000484752 DDX54Q8TDD1 881 aaKnown RBP15.05■□□□□ -0
RFTN1-210ENST00000484752 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
RFTN1-210ENST00000484752 DCTN1Q14203 1278 aa15.04■□□□□ -0
RFTN1-210ENST00000484752 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
RFTN1-210ENST00000484752 CFAP44Q96MT7 982 aa15.04■□□□□ -0
RFTN1-210ENST00000484752 BABAM1Q9NWV8 329 aa15.04■□□□□ -0
RFTN1-210ENST00000484752 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
RFTN1-210ENST00000484752 DLG5Q8TDM6 1919 aa15.04■□□□□ -0
RFTN1-210ENST00000484752 CEMIPQ8WUJ3 1361 aa15.03■□□□□ -0
RFTN1-210ENST00000484752 CYP27B1O15528 508 aa15.03■□□□□ -0
RFTN1-210ENST00000484752 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
RFTN1-210ENST00000484752 IL17REQ8NFR9 667 aa15.02■□□□□ -0
RFTN1-210ENST00000484752 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
RFTN1-210ENST00000484752 THUMPD2Q9BTF0 503 aaKnown RBP15.02■□□□□ -0
RFTN1-210ENST00000484752 CABP4P57796 275 aa15.01□□□□□ -0.01
RFTN1-210ENST00000484752 RBM6P78332 1123 aaKnown RBP15.01□□□□□ -0.01
RFTN1-210ENST00000484752 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
RFTN1-210ENST00000484752 TSPYL4Q9UJ04 414 aa15.01□□□□□ -0.01
RFTN1-210ENST00000484752 LRRC37A3O60309 1634 aa15.01□□□□□ -0.01
RFTN1-210ENST00000484752 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
RFTN1-210ENST00000484752 GLI3P10071 1580 aa15□□□□□ -0.01
RFTN1-210ENST00000484752 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
RFTN1-210ENST00000484752 CT47B1P0C2W7 299 aaPredicted RBP15□□□□□ -0.01
RFTN1-210ENST00000484752 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
RFTN1-210ENST00000484752 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
RFTN1-210ENST00000484752 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
RFTN1-210ENST00000484752 CHL1O00533 1208 aa14.99□□□□□ -0.01
RFTN1-210ENST00000484752 ONECUT3O60422 494 aaPredicted RBP14.99□□□□□ -0.01
RFTN1-210ENST00000484752 TRMT2AQ8IZ69 625 aaKnown RBP14.99□□□□□ -0.01
RFTN1-210ENST00000484752 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
RFTN1-210ENST00000484752 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
RFTN1-210ENST00000484752 THSD7AQ9UPZ6 1657 aa14.99□□□□□ -0.01
RFTN1-210ENST00000484752 KDM6AO15550 1401 aaPredicted RBP14.99□□□□□ -0.01
RFTN1-210ENST00000484752 ADAMTS7Q9UKP4 1686 aa14.98□□□□□ -0.01
RFTN1-210ENST00000484752 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
RFTN1-210ENST00000484752 RXRBP28702 533 aa14.98□□□□□ -0.01
RFTN1-210ENST00000484752 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms