RNA–Protein interactions for RNA: ENST00000484031.5

TRO-222, Transcript of trophinin, human

TSL 5

Gene TRO, Length 650 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-222	ENST00000484031	TNS4	Q8IZW8	715 aa		18.9	■□□□□ 0.62
TRO-222	ENST00000484031	DDX54	Q8TDD1	881 aa	Known RBP	18.9	■□□□□ 0.62
TRO-222	ENST00000484031	WDR90	Q96KV7	1748 aa		18.89	■□□□□ 0.61
TRO-222	ENST00000484031	SYTL4	Q96C24	671 aa	Predicted RBP	18.89	■□□□□ 0.61
TRO-222	ENST00000484031	KLRG1	Q96E93	195 aa		18.89	■□□□□ 0.61
TRO-222	ENST00000484031	IGSF1	Q8N6C5	1336 aa		18.89	■□□□□ 0.61
TRO-222	ENST00000484031	ANKRD24	Q8TF21	1146 aa		18.88	■□□□□ 0.61
TRO-222	ENST00000484031	CIC	Q96RK0	1608 aa	Predicted RBP	18.87	■□□□□ 0.61
TRO-222	ENST00000484031	DOT1L	Q8TEK3	1739 aa		18.86	■□□□□ 0.61
TRO-222	ENST00000484031	WWC3	Q9ULE0	1092 aa		18.86	■□□□□ 0.61
TRO-222	ENST00000484031	USP31	Q70CQ4	1352 aa		18.85	■□□□□ 0.61
TRO-222	ENST00000484031	HTRA3	P83110	453 aa		18.84	■□□□□ 0.61
TRO-222	ENST00000484031	FLAD1	Q8NFF5	587 aa		18.84	■□□□□ 0.61
TRO-222	ENST00000484031	LTN1	O94822	1766 aa		18.83	■□□□□ 0.61
TRO-222	ENST00000484031	EVC2	Q86UK5	1308 aa		18.83	■□□□□ 0.61
TRO-222	ENST00000484031	USP54	Q70EL1	1684 aa		18.82	■□□□□ 0.6
TRO-222	ENST00000484031	PCNT	O95613	3336 aa		18.82	■□□□□ 0.6
TRO-222	ENST00000484031	RBM46	Q8TBY0	533 aa	Known RBP	18.82	■□□□□ 0.6
TRO-222	ENST00000484031	NMRK2	Q9NPI5	230 aa		18.82	■□□□□ 0.6
TRO-222	ENST00000484031	KTN1	Q86UP2	1357 aa	Known RBP	18.81	■□□□□ 0.6
TRO-222	ENST00000484031	USP47	Q96K76	1375 aa		18.81	■□□□□ 0.6
TRO-222	ENST00000484031	C5	P01031	1676 aa		18.81	■□□□□ 0.6
TRO-222	ENST00000484031	SLC34A2	O95436	690 aa		18.8	■□□□□ 0.6
TRO-222	ENST00000484031	MON2	Q7Z3U7	1717 aa		18.78	■□□□□ 0.6
TRO-222	ENST00000484031	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
TRO-222	ENST00000484031	TAF1L	Q8IZX4	1826 aa		18.77	■□□□□ 0.59
TRO-222	ENST00000484031	HMGB2	P26583	209 aa	Known RBP	18.76	■□□□□ 0.59
TRO-222	ENST00000484031	FSTL1	Q12841	308 aa		18.76	■□□□□ 0.59
TRO-222	ENST00000484031	AMIGO3	Q86WK7	504 aa		18.76	■□□□□ 0.59
TRO-222	ENST00000484031	NME9	Q86XW9	330 aa		18.76	■□□□□ 0.59
TRO-222	ENST00000484031	ZCRB1	Q8TBF4	217 aa	Known RBP	18.76	■□□□□ 0.59
TRO-222	ENST00000484031	FAM208A	Q9UK61	1670 aa	Known RBP	18.76	■□□□□ 0.59
TRO-222	ENST00000484031	IP6K1	Q92551	441 aa		18.75	■□□□□ 0.59
TRO-222	ENST00000484031	TOGARAM1	Q9Y4F4	1720 aa		18.74	■□□□□ 0.59
TRO-222	ENST00000484031	TRIM26	Q12899	539 aa	Predicted RBP	18.74	■□□□□ 0.59
TRO-222	ENST00000484031	SBNO2	Q9Y2G9	1366 aa		18.73	■□□□□ 0.59
TRO-222	ENST00000484031	C4B	P0C0L5	1744 aa		18.72	■□□□□ 0.59
TRO-222	ENST00000484031	LTV1	Q96GA3	475 aa	Predicted RBP	18.72	■□□□□ 0.59
TRO-222	ENST00000484031	MEGF6	O75095	1541 aa		18.72	■□□□□ 0.59
TRO-222	ENST00000484031	PXDNL	A1KZ92	1463 aa		18.71	■□□□□ 0.59
TRO-222	ENST00000484031	PALLD	Q8WX93	1383 aa		18.71	■□□□□ 0.59
TRO-222	ENST00000484031	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.71	■□□□□ 0.59
TRO-222	ENST00000484031	UBR3	Q6ZT12	1888 aa		18.71	■□□□□ 0.59
TRO-222	ENST00000484031	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.7	■□□□□ 0.58
TRO-222	ENST00000484031	SMIM5	Q71RC9	77 aa		18.7	■□□□□ 0.58
TRO-222	ENST00000484031	AK7	Q96M32	723 aa		18.7	■□□□□ 0.58
TRO-222	ENST00000484031	KIAA1551	Q9HCM1	1747 aa		18.7	■□□□□ 0.58
TRO-222	ENST00000484031	CD163L1	Q9NR16	1453 aa		18.7	■□□□□ 0.58
TRO-222	ENST00000484031	PHF14	O94880	888 aa		18.69	■□□□□ 0.58
TRO-222	ENST00000484031	HSPA1A	P0DMV8	641 aa	Known RBP	18.69	■□□□□ 0.58
TRO-222	ENST00000484031	HSPA1B	P0DMV9	641 aa	Known RBP	18.69	■□□□□ 0.58
TRO-222	ENST00000484031	KIF13B	Q9NQT8	1826 aa		18.69	■□□□□ 0.58
TRO-222	ENST00000484031	ARHGAP27	Q6ZUM4	889 aa		18.68	■□□□□ 0.58
TRO-222	ENST00000484031	BCS1L	Q9Y276	419 aa		18.68	■□□□□ 0.58
TRO-222	ENST00000484031	NSD3	Q9BZ95	1437 aa		18.67	■□□□□ 0.58
TRO-222	ENST00000484031	SSFA2	P28290	1259 aa		18.67	■□□□□ 0.58
TRO-222	ENST00000484031	TGFB2	P61812	414 aa		18.67	■□□□□ 0.58
TRO-222	ENST00000484031	C10orf71	Q711Q0	1435 aa		18.66	■□□□□ 0.58
TRO-222	ENST00000484031	PLEKHG2	Q9H7P9	1386 aa		18.66	■□□□□ 0.58
TRO-222	ENST00000484031	RGPD2	P0DJD1	1756 aa		18.65	■□□□□ 0.58
TRO-222	ENST00000484031	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.65	■□□□□ 0.58
TRO-222	ENST00000484031	C9orf131	Q5VYM1	1079 aa		18.65	■□□□□ 0.58
TRO-222	ENST00000484031		A0A0G2JLW4	131 aa		18.64	■□□□□ 0.57
TRO-222	ENST00000484031	KCP	Q6ZWJ8	1503 aa		18.64	■□□□□ 0.57
TRO-222	ENST00000484031	MMP10	P09238	476 aa		18.63	■□□□□ 0.57
TRO-222	ENST00000484031	HOXC9	P31274	260 aa		18.63	■□□□□ 0.57
TRO-222	ENST00000484031	CGNL1	Q0VF96	1302 aa		18.63	■□□□□ 0.57
TRO-222	ENST00000484031	KDM2B	Q8NHM5	1336 aa		18.63	■□□□□ 0.57
TRO-222	ENST00000484031	EDC4	Q6P2E9	1401 aa	Known RBP	18.63	■□□□□ 0.57
TRO-222	ENST00000484031	MPRIP	Q6WCQ1	1025 aa		18.62	■□□□□ 0.57
TRO-222	ENST00000484031	SMC1B	Q8NDV3	1235 aa		18.62	■□□□□ 0.57
TRO-222	ENST00000484031	SMARCC1	Q92922	1105 aa	Predicted RBP	18.62	■□□□□ 0.57
TRO-222	ENST00000484031	MAP3K19	Q56UN5	1328 aa		18.61	■□□□□ 0.57
TRO-222	ENST00000484031	RRAGC	Q9HB90	399 aa		18.61	■□□□□ 0.57
TRO-222	ENST00000484031	FCHSD2	O94868	740 aa		18.6	■□□□□ 0.57
TRO-222	ENST00000484031	NBPF6	Q5VWK0	638 aa		18.6	■□□□□ 0.57
TRO-222	ENST00000484031	LINC00116	Q8NCU8	138 aa		18.6	■□□□□ 0.57
TRO-222	ENST00000484031	NBPF4	Q96M43	638 aa		18.6	■□□□□ 0.57
TRO-222	ENST00000484031	BRCA1	P38398	1863 aa	Known RBP	18.6	■□□□□ 0.57
TRO-222	ENST00000484031	PKD1L3	Q7Z443	1732 aa		18.6	■□□□□ 0.57
TRO-222	ENST00000484031	MAP2	P11137	1827 aa	Known RBP	18.59	■□□□□ 0.57
TRO-222	ENST00000484031	DPEP1	P16444	411 aa		18.59	■□□□□ 0.57
TRO-222	ENST00000484031	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.59	■□□□□ 0.57
TRO-222	ENST00000484031	PCDH11X	Q9BZA7	1347 aa		18.58	■□□□□ 0.57
TRO-222	ENST00000484031	PCDH11Y	Q9BZA8	1340 aa		18.58	■□□□□ 0.57
TRO-222	ENST00000484031	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.58	■□□□□ 0.57
TRO-222	ENST00000484031	AMPH	P49418	695 aa		18.57	■□□□□ 0.56
TRO-222	ENST00000484031	RAPGEF4	Q8WZA2	1011 aa		18.57	■□□□□ 0.56
TRO-222	ENST00000484031	SLC12A5	Q9H2X9	1139 aa		18.57	■□□□□ 0.56
TRO-222	ENST00000484031	ITGB4	P16144	1822 aa		18.57	■□□□□ 0.56
TRO-222	ENST00000484031	ARFGEF1	Q9Y6D6	1849 aa		18.57	■□□□□ 0.56
TRO-222	ENST00000484031	KCNA3	P22001	575 aa		18.56	■□□□□ 0.56
TRO-222	ENST00000484031	USHBP1	Q8N6Y0	703 aa		18.56	■□□□□ 0.56
TRO-222	ENST00000484031	TMC1	Q8TDI8	760 aa		18.56	■□□□□ 0.56
TRO-222	ENST00000484031	PCDH10	Q9P2E7	1040 aa		18.56	■□□□□ 0.56
TRO-222	ENST00000484031		A0A1W2PP64	1363 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	LOC102724428	A0A0B4J2F2	783 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	GNPAT	O15228	680 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	CYP27B1	O15528	508 aa		18.55	■□□□□ 0.56
TRO-222	ENST00000484031	TAT	P17735	454 aa	Predicted RBP	18.55	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms