RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 GNAI1P63096 354 aa11.38□□□□□ -0.59
CDC42SE1-204ENST00000483763 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
CDC42SE1-204ENST00000483763 IP6K1Q92551 441 aa11.38□□□□□ -0.59
CDC42SE1-204ENST00000483763 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 IGHDP01880 384 aa11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 NOB1Q9ULX3 412 aaKnown RBP11.37□□□□□ -0.59
CDC42SE1-204ENST00000483763 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 NBPF6Q5VWK0 638 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 ZKSCAN2Q63HK3 967 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 NBPF4Q96M43 638 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
CDC42SE1-204ENST00000483763 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
CDC42SE1-204ENST00000483763 AXIN2Q9Y2T1 843 aa11.35□□□□□ -0.59
CDC42SE1-204ENST00000483763 CHL1O00533 1208 aa11.35□□□□□ -0.59
CDC42SE1-204ENST00000483763 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-204ENST00000483763 LTN1O94822 1766 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 ATF7IPQ6VMQ6 1270 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 CRB1P82279 1406 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 TRPM3Q9HCF6 1732 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 RTL1A6NKG5 1358 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 USP19O94966 1318 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
CDC42SE1-204ENST00000483763 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 ALDH1L2Q3SY69 923 aa11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 FTSJ3Q8IY81 847 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
CDC42SE1-204ENST00000483763 SLIT3O75094 1523 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 NPHP3Q7Z494 1330 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 RGS17Q9UGC6 210 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 BRPF1P55201 1214 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 HOMEZQ8IX15 550 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
CDC42SE1-204ENST00000483763 ZNF428Q96B54 188 aa11.31□□□□□ -0.6
CDC42SE1-204ENST00000483763 RTF1Q92541 710 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-204ENST00000483763 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-204ENST00000483763 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
CDC42SE1-204ENST00000483763 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
CDC42SE1-204ENST00000483763 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
CDC42SE1-204ENST00000483763 ANKRD24Q8TF21 1146 aa11.3□□□□□ -0.6
CDC42SE1-204ENST00000483763 ALS2Q96Q42 1657 aa11.29□□□□□ -0.6
CDC42SE1-204ENST00000483763 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
CDC42SE1-204ENST00000483763 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-204ENST00000483763 TSPYL4Q9UJ04 414 aa11.28□□□□□ -0.6
CDC42SE1-204ENST00000483763 PHRF1Q9P1Y6 1649 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-204ENST00000483763 PXDNQ92626 1479 aa11.28□□□□□ -0.6
CDC42SE1-204ENST00000483763 POTEAQ6S8J7 498 aa11.27□□□□□ -0.6
CDC42SE1-204ENST00000483763 LGR6Q9HBX8 967 aa11.27□□□□□ -0.6
CDC42SE1-204ENST00000483763 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.6
CDC42SE1-204ENST00000483763 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.6
CDC42SE1-204ENST00000483763 MAP3K5Q99683 1374 aa11.27□□□□□ -0.61
CDC42SE1-204ENST00000483763 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-204ENST00000483763 MEX3CQ5U5Q3 659 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-204ENST00000483763 ERBB3P21860 1342 aa11.27□□□□□ -0.61
CDC42SE1-204ENST00000483763 KIAA0232Q92628 1395 aa11.27□□□□□ -0.61
CDC42SE1-204ENST00000483763 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 COL16A1Q07092 1604 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 MS4A1P11836 297 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 RGS3P49796 1198 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 AAMPQ13685 434 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 PDE4AP27815 886 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
CDC42SE1-204ENST00000483763 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 LRP6O75581 1613 aa11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 ABCC4O15439 1325 aa11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 CEMIPQ8WUJ3 1361 aa11.25□□□□□ -0.61
CDC42SE1-204ENST00000483763 BACH2Q9BYV9 841 aa11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 JCADQ9P266 1359 aa11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 MPRIPQ6WCQ1 1025 aa11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 SOS2Q07890 1332 aaPredicted RBP11.24□□□□□ -0.61
CDC42SE1-204ENST00000483763 LRRC37A3O60309 1634 aa11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 G2E3Q7L622 706 aa11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 RGS12O14924 1447 aa11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
CDC42SE1-204ENST00000483763 KCNQ3O43525 872 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms