RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 APBA3O96018 575 aa34.93■■■■□ 3.18
PDCD4-208ENST00000483670 DDX54Q8TDD1 881 aaKnown RBP34.93■■■■□ 3.18
PDCD4-208ENST00000483670 SHANK3Q9BYB0 1731 aa34.92■■■■□ 3.18
PDCD4-208ENST00000483670 CNGB1Q14028 1251 aaPredicted RBP34.91■■■■□ 3.18
PDCD4-208ENST00000483670 PCDH11XQ9BZA7 1347 aa34.9■■■■□ 3.18
PDCD4-208ENST00000483670 PCDH11YQ9BZA8 1340 aa34.9■■■■□ 3.18
PDCD4-208ENST00000483670 PKD1L3Q7Z443 1732 aa34.89■■■■□ 3.18
PDCD4-208ENST00000483670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.89■■■■□ 3.181e-9■■□□□ 11.7
PDCD4-208ENST00000483670 NHSQ6T4R5 1651 aa34.89■■■■□ 3.18
PDCD4-208ENST00000483670 IL13P35225 146 aa34.87■■■■□ 3.17
PDCD4-208ENST00000483670 EN1Q05925 392 aaPredicted RBP34.87■■■■□ 3.17
PDCD4-208ENST00000483670 SPG7Q9UQ90 795 aa34.87■■■■□ 3.17
PDCD4-208ENST00000483670 RGPD3A6NKT7 1758 aaPredicted RBP34.87■■■■□ 3.17
PDCD4-208ENST00000483670 RGPD4Q7Z3J3 1758 aa34.87■■■■□ 3.17
PDCD4-208ENST00000483670 KAT6BQ8WYB5 2073 aa34.84■■■■□ 3.17
PDCD4-208ENST00000483670 DIAPH1O60610 1272 aaKnown RBP34.83■■■■□ 3.17
PDCD4-208ENST00000483670 CAMKK2Q96RR4 588 aa34.83■■■■□ 3.17
PDCD4-208ENST00000483670 PLSCR1O15162 318 aa34.82■■■■□ 3.16
PDCD4-208ENST00000483670 DDX10Q13206 875 aaKnown RBP34.82■■■■□ 3.16
PDCD4-208ENST00000483670 CFAP53Q96M91 514 aa34.81■■■■□ 3.16
PDCD4-208ENST00000483670 KDRP35968 1356 aa34.8■■■■□ 3.16
PDCD4-208ENST00000483670 ACSBG1Q96GR2 724 aa34.79■■■■□ 3.16
PDCD4-208ENST00000483670 PPP2R1AP30153 589 aa34.78■■■■□ 3.16
PDCD4-208ENST00000483670 EZH2Q15910 746 aaKnown RBP34.78■■■■□ 3.16
PDCD4-208ENST00000483670 COL3A1P02461 1466 aaPredicted RBP34.77■■■■□ 3.16
PDCD4-208ENST00000483670 RREB1Q92766 1687 aa34.76■■■■□ 3.16
PDCD4-208ENST00000483670 DOT1LQ8TEK3 1739 aa34.76■■■■□ 3.16
PDCD4-208ENST00000483670 KCNQ2O43526 872 aa34.76■■■■□ 3.16
PDCD4-208ENST00000483670 AMOTQ4VCS5 1084 aa34.76■■■■□ 3.16
PDCD4-208ENST00000483670 SULT6B1Q6IMI4 303 aa34.76■■■■□ 3.16
PDCD4-208ENST00000483670 CYP27B1O15528 508 aa34.75■■■■□ 3.15
PDCD4-208ENST00000483670 PLEKHO1Q53GL0 409 aaPredicted RBP34.74■■■■□ 3.15
PDCD4-208ENST00000483670 PTF1AQ7RTS3 328 aa34.74■■■■□ 3.15
PDCD4-208ENST00000483670 BTAF1O14981 1849 aa34.74■■■■□ 3.15
PDCD4-208ENST00000483670 IFNL2Q8IZJ0 200 aa34.73■■■■□ 3.15
PDCD4-208ENST00000483670 NKX1-1Q15270 411 aaPredicted RBP34.72■■■■□ 3.15
PDCD4-208ENST00000483670 RALBP1Q15311 655 aa34.72■■■■□ 3.15
PDCD4-208ENST00000483670 AEBP1Q8IUX7 1158 aa34.72■■■■□ 3.15
PDCD4-208ENST00000483670 PRIM1P49642 420 aaKnown RBP34.69■■■■□ 3.14
PDCD4-208ENST00000483670 SYTL4Q96C24 671 aaPredicted RBP34.69■■■■□ 3.14
PDCD4-208ENST00000483670 NUDCQ9Y266 331 aa34.69■■■■□ 3.14
PDCD4-208ENST00000483670 NUP188Q5SRE5 1749 aa34.67■■■■□ 3.14
PDCD4-208ENST00000483670 HSP90AB1P08238 724 aaKnown RBP34.67■■■■□ 3.14
PDCD4-208ENST00000483670 PHKG2P15735 406 aa34.67■■■■□ 3.14
PDCD4-208ENST00000483670 ZNF316A6NFI3 1004 aaPredicted RBP34.66■■■■□ 3.14
PDCD4-208ENST00000483670 U2SURPO15042 1029 aaKnown RBP34.64■■■■□ 3.14
PDCD4-208ENST00000483670 NBPF14Q5TI25 921 aa34.64■■■■□ 3.14
PDCD4-208ENST00000483670 HMOX1P09601 288 aa34.63■■■■□ 3.13
PDCD4-208ENST00000483670 ZNF530Q6P9A1 599 aaPredicted RBP34.62■■■■□ 3.13
PDCD4-208ENST00000483670 TXNRD1Q16881 649 aa34.61■■■■□ 3.13
PDCD4-208ENST00000483670 C1orf141Q5JVX7 400 aa34.61■■■■□ 3.13
PDCD4-208ENST00000483670 TOGARAM1Q9Y4F4 1720 aa34.61■■■■□ 3.13
PDCD4-208ENST00000483670 ITGB4P16144 1822 aa34.6■■■■□ 3.13
PDCD4-208ENST00000483670 DCAF5Q96JK2 942 aa34.59■■■■□ 3.13
PDCD4-208ENST00000483670 PROM2Q8N271 834 aa34.57■■■■□ 3.12
PDCD4-208ENST00000483670 SLC27A3Q5K4L6 730 aa34.56■■■■□ 3.12
PDCD4-208ENST00000483670 MPRIPQ6WCQ1 1025 aa34.55■■■■□ 3.12
PDCD4-208ENST00000483670 ERVV-2B6SEH9 535 aa34.54■■■■□ 3.12
PDCD4-208ENST00000483670 HMGB2P26583 209 aaKnown RBP34.54■■■■□ 3.12
PDCD4-208ENST00000483670 LY75O60449 1722 aa34.54■■■■□ 3.12
PDCD4-208ENST00000483670 MYBBP1AQ9BQG0 1328 aaKnown RBP34.54■■■■□ 3.12
PDCD4-208ENST00000483670 AKAP4Q5JQC9 854 aa34.53■■■■□ 3.12
PDCD4-208ENST00000483670 TMOD3Q9NYL9 352 aa34.53■■■■□ 3.12
PDCD4-208ENST00000483670 U2AF1L5P0DN76 240 aaPredicted RBP34.51■■■■□ 3.12
PDCD4-208ENST00000483670 U2AF1Q01081 240 aaKnown RBP eCLIP34.51■■■■□ 3.12
PDCD4-208ENST00000483670 SMARCC1Q92922 1105 aaPredicted RBP34.51■■■■□ 3.12
PDCD4-208ENST00000483670 FCHSD2O94868 740 aa34.49■■■■□ 3.11
PDCD4-208ENST00000483670 R3HDM1Q15032 1099 aaKnown RBP34.49■■■■□ 3.11
PDCD4-208ENST00000483670 PIGBQ92521 554 aa34.48■■■■□ 3.11
PDCD4-208ENST00000483670 GAS2L2Q8NHY3 880 aa34.47■■■■□ 3.11
PDCD4-208ENST00000483670 RSPH6AQ9H0K4 717 aa34.47■■■■□ 3.11
PDCD4-208ENST00000483670 KDM6AO15550 1401 aaPredicted RBP34.47■■■■□ 3.11
PDCD4-208ENST00000483670 PSDA5PKW4 1024 aaPredicted RBP34.46■■■■□ 3.11
PDCD4-208ENST00000483670 MTHFSDQ2M296 383 aaKnown RBP34.46■■■■□ 3.11
PDCD4-208ENST00000483670 PRKRIP1Q9H875 184 aaPredicted RBP34.46■■■■□ 3.11
PDCD4-208ENST00000483670 SCN11AQ9UI33 1791 aa34.46■■■■□ 3.11
PDCD4-208ENST00000483670 PRKAR2BP31323 418 aa34.45■■■■□ 3.11
PDCD4-208ENST00000483670 STK32BQ9NY57 414 aa34.45■■■■□ 3.11
PDCD4-208ENST00000483670 PALLDQ8WX93 1383 aa34.45■■■■□ 3.11
PDCD4-208ENST00000483670 PAPPAQ13219 1627 aa34.44■■■■□ 3.1
PDCD4-208ENST00000483670 CABP4P57796 275 aa34.43■■■■□ 3.1
PDCD4-208ENST00000483670 CCNL1Q9UK58 526 aaPredicted RBP34.42■■■■□ 3.1
PDCD4-208ENST00000483670 PNNQ9H307 717 aaKnown RBP34.41■■■■□ 3.1
PDCD4-208ENST00000483670 LRRC4BQ9NT99 713 aa34.41■■■■□ 3.1
PDCD4-208ENST00000483670 ANO8Q9HCE9 1232 aaPredicted RBP34.4■■■■□ 3.1
PDCD4-208ENST00000483670 NEFMP07197 916 aa34.39■■■■□ 3.1
PDCD4-208ENST00000483670 SLC15A2Q16348 729 aa34.39■■■■□ 3.1
PDCD4-208ENST00000483670 VIRMAQ69YN4 1812 aaKnown RBP34.39■■■■□ 3.1
PDCD4-208ENST00000483670 ADAMTS7Q9UKP4 1686 aa34.38■■■■□ 3.09
PDCD4-208ENST00000483670 MAP3K5Q99683 1374 aa34.36■■■■□ 3.09
PDCD4-208ENST00000483670 GNAT3A8MTJ3 354 aa34.36■■■■□ 3.09
PDCD4-208ENST00000483670 RNMTO43148 476 aaKnown RBP34.35■■■■□ 3.09
PDCD4-208ENST00000483670 PHACTR3Q96KR7 559 aa34.35■■■■□ 3.09
PDCD4-208ENST00000483670 MRC1P22897 1456 aa34.34■■■■□ 3.09
PDCD4-208ENST00000483670 ASAP1Q9ULH1 1129 aa34.34■■■■□ 3.09
PDCD4-208ENST00000483670 NFATC2IPQ8NCF5 419 aa34.33■■■■□ 3.09
PDCD4-208ENST00000483670 SLC52A2Q9HAB3 445 aa34.33■■■■□ 3.09
PDCD4-208ENST00000483670 ATG3Q9NT62 314 aa34.33■■■■□ 3.09
PDCD4-208ENST00000483670 C5P01031 1676 aa34.32■■■■□ 3.08
PDCD4-208ENST00000483670 LOC102724428A0A0B4J2F2 783 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms