RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 RRP15Q9Y3B9 282 aaKnown RBP9.4□□□□□ -0.9
COL4A5-205ENST00000483338 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.91
COL4A5-205ENST00000483338 ANKRD30AQ9BXX3 1397 aa9.4□□□□□ -0.91
COL4A5-205ENST00000483338 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 ZSCAN26Q16670 478 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL4A5-205ENST00000483338 DMRT2Q9Y5R5 561 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 LRRFIP2Q9Y608 721 aaKnown RBP9.39□□□□□ -0.91
COL4A5-205ENST00000483338 MBD3O95983 291 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 TTC31Q49AM3 519 aaPredicted RBP9.39□□□□□ -0.91
COL4A5-205ENST00000483338 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
COL4A5-205ENST00000483338 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 PTPRCP08575 1304 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 ST5P78524 1137 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 MNS1Q8NEH6 495 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 CARD11Q9BXL7 1154 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 DEF6Q9H4E7 631 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 ANKRD36BQ8N2N9 1353 aa9.39□□□□□ -0.91
COL4A5-205ENST00000483338 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 CAMSAP2Q08AD1 1489 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 SPAG9O60271 1321 aaKnown RBP9.38□□□□□ -0.91
COL4A5-205ENST00000483338 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 AP5Z1O43299 807 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 ELF2Q15723 593 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
COL4A5-205ENST00000483338 ZNF215Q9UL58 517 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-205ENST00000483338 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 MAGI3Q5TCQ9 1506 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 RALGAPBQ86X10 1494 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 KDM4AO75164 1064 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
COL4A5-205ENST00000483338 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 ERBB3P21860 1342 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
COL4A5-205ENST00000483338 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
COL4A5-205ENST00000483338 ADCY10Q96PN6 1610 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 OS9Q13438 667 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 SPC24Q8NBT2 197 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 TEX35Q5T0J7 233 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 PLXNC1O60486 1568 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 PPP1R12AO14974 1030 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 CLSTN1O94985 981 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
COL4A5-205ENST00000483338 CWC15Q9P013 229 aaKnown RBP9.36□□□□□ -0.91
COL4A5-205ENST00000483338 GPATCH8Q9UKJ3 1502 aaKnown RBP9.35□□□□□ -0.91
COL4A5-205ENST00000483338 TPM3P06753 285 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 MAGEA9P43362 315 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
COL4A5-205ENST00000483338 PNMA6AP0CW24 399 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-205ENST00000483338 MAP2K2P36507 400 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 BIRC2Q13490 618 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 MCTP2Q6DN12 878 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 FBXO18Q8NFZ0 1043 aa9.35□□□□□ -0.91
COL4A5-205ENST00000483338 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-205ENST00000483338 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-205ENST00000483338 PTGS1P23219 599 aa9.34□□□□□ -0.91
COL4A5-205ENST00000483338 NBPF10Q6P3W6 841 aaKnown RBP9.34□□□□□ -0.91
COL4A5-205ENST00000483338 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
COL4A5-205ENST00000483338 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-205ENST00000483338 ZCCHC11Q5TAX3 1644 aaKnown RBP9.34□□□□□ -0.91
COL4A5-205ENST00000483338 APAF1O14727 1248 aa9.34□□□□□ -0.91
COL4A5-205ENST00000483338 H2AFXP16104 143 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-205ENST00000483338 MAP9Q49MG5 647 aa9.34□□□□□ -0.91
COL4A5-205ENST00000483338 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
COL4A5-205ENST00000483338 NBPF9Q3BBW0 867 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
COL4A5-205ENST00000483338 GGT6Q6P531 493 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 CWC22Q9HCG8 908 aaKnown RBP9.33□□□□□ -0.92
COL4A5-205ENST00000483338 LRMPQ12912 555 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 ANKRD20A12PQ8NF67 263 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 GOLGA5Q8TBA6 731 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 IFT57Q9NWB7 429 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 PLCH2O75038 1416 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 RARSP54136 660 aaKnown RBP9.33□□□□□ -0.92
COL4A5-205ENST00000483338 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
COL4A5-205ENST00000483338 NPHP1O15259 732 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 INHBEP58166 350 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
COL4A5-205ENST00000483338 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
COL4A5-205ENST00000483338 ZBTB12Q9Y330 459 aaPredicted RBP9.32□□□□□ -0.92
COL4A5-205ENST00000483338 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
COL4A5-205ENST00000483338 CLCN6P51797 869 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms