RNA–Protein interactions for RNA: ENST00000483173.5

BRD9-204, Transcript of bromodomain containing 9, humanhuman

TSL 2 BASIC

Gene BRD9, Length 2,120 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-204ENST00000483173 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
BRD9-204ENST00000483173 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
BRD9-204ENST00000483173 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
BRD9-204ENST00000483173 GNAI1P63096 354 aa16.4■□□□□ 0.22
BRD9-204ENST00000483173 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
BRD9-204ENST00000483173 COL16A1Q07092 1604 aaPredicted RBP16.4■□□□□ 0.22
BRD9-204ENST00000483173 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
BRD9-204ENST00000483173 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
BRD9-204ENST00000483173 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
BRD9-204ENST00000483173 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
BRD9-204ENST00000483173 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
BRD9-204ENST00000483173 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
BRD9-204ENST00000483173 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
BRD9-204ENST00000483173 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
BRD9-204ENST00000483173 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
BRD9-204ENST00000483173 COL5A2P05997 1499 aaPredicted RBP16.37■□□□□ 0.21
BRD9-204ENST00000483173 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
BRD9-204ENST00000483173 B4GALNT3Q6L9W6 998 aa16.37■□□□□ 0.21
BRD9-204ENST00000483173 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
BRD9-204ENST00000483173 PLIN1O60240 522 aa16.36■□□□□ 0.21
BRD9-204ENST00000483173 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
BRD9-204ENST00000483173 PLEKHO1Q53GL0 409 aaPredicted RBP16.36■□□□□ 0.21
BRD9-204ENST00000483173 CRB1P82279 1406 aa16.36■□□□□ 0.21
BRD9-204ENST00000483173 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
BRD9-204ENST00000483173 BCAR3O75815 825 aa16.36■□□□□ 0.21
BRD9-204ENST00000483173 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
BRD9-204ENST00000483173 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
BRD9-204ENST00000483173 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
BRD9-204ENST00000483173 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
BRD9-204ENST00000483173 CHL1O00533 1208 aa16.33■□□□□ 0.21
BRD9-204ENST00000483173 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.33■□□□□ 0.21
BRD9-204ENST00000483173 IL17REQ8NFR9 667 aa16.33■□□□□ 0.21
BRD9-204ENST00000483173 LRRC37A3O60309 1634 aa16.33■□□□□ 0.2
BRD9-204ENST00000483173 MEGF6O75095 1541 aa16.32■□□□□ 0.2
BRD9-204ENST00000483173 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
BRD9-204ENST00000483173 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
BRD9-204ENST00000483173 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
BRD9-204ENST00000483173 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
BRD9-204ENST00000483173 PLEKHG2Q9H7P9 1386 aa16.31■□□□□ 0.2
BRD9-204ENST00000483173 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
BRD9-204ENST00000483173 COL14A1Q05707 1796 aaKnown RBP16.3■□□□□ 0.2
BRD9-204ENST00000483173 EVA1CP58658 441 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
BRD9-204ENST00000483173 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
BRD9-204ENST00000483173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.24e-9■■■■□ 21.4
BRD9-204ENST00000483173 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
BRD9-204ENST00000483173 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
BRD9-204ENST00000483173 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
BRD9-204ENST00000483173 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 VAMP4O75379 141 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
BRD9-204ENST00000483173 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.2
BRD9-204ENST00000483173 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
BRD9-204ENST00000483173 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.2
BRD9-204ENST00000483173 OVOS2A0A0G2JMS6 1433 aa16.27■□□□□ 0.19
BRD9-204ENST00000483173 ADAMTS2O95450 1211 aa16.27■□□□□ 0.19
BRD9-204ENST00000483173 CANXP27824 592 aaKnown RBP16.27■□□□□ 0.19
BRD9-204ENST00000483173 TAF7Q15545 349 aaPredicted RBP16.27■□□□□ 0.19
BRD9-204ENST00000483173 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.19
BRD9-204ENST00000483173 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.19
BRD9-204ENST00000483173 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
BRD9-204ENST00000483173 PKD1L3Q7Z443 1732 aa16.26■□□□□ 0.19
BRD9-204ENST00000483173 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
BRD9-204ENST00000483173 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
BRD9-204ENST00000483173 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
BRD9-204ENST00000483173 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
BRD9-204ENST00000483173 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
BRD9-204ENST00000483173 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
BRD9-204ENST00000483173 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
BRD9-204ENST00000483173 CRBNQ96SW2 442 aa16.25■□□□□ 0.19
BRD9-204ENST00000483173 PHKG2P15735 406 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 JCADQ9P266 1359 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 IL2RBP14784 551 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 TEFQ10587 303 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
BRD9-204ENST00000483173 VIRMAQ69YN4 1812 aaKnown RBP16.23■□□□□ 0.19
BRD9-204ENST00000483173 CYP27B1O15528 508 aa16.23■□□□□ 0.19
BRD9-204ENST00000483173 USP35Q9P2H5 1018 aa16.23■□□□□ 0.19
BRD9-204ENST00000483173 PLCH1Q4KWH8 1693 aa16.23■□□□□ 0.19
BRD9-204ENST00000483173 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
BRD9-204ENST00000483173 KDM6AO15550 1401 aaPredicted RBP16.21■□□□□ 0.19
BRD9-204ENST00000483173 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
BRD9-204ENST00000483173 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.19
BRD9-204ENST00000483173 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
BRD9-204ENST00000483173 PANK1Q8TE04 598 aa16.21■□□□□ 0.18
BRD9-204ENST00000483173 PCDH11XQ9BZA7 1347 aa16.2■□□□□ 0.18
BRD9-204ENST00000483173 PCDH11YQ9BZA8 1340 aa16.2■□□□□ 0.18
BRD9-204ENST00000483173 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
BRD9-204ENST00000483173 SCN11AQ9UI33 1791 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms