RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 RRS1Q15050 365 aaKnown RBP6.18□□□□□ -1.42
HDAC9-224ENST00000483142 NUTM2GQ5VZR2 741 aa6.18□□□□□ -1.42
HDAC9-224ENST00000483142 FNBP4Q8N3X1 1017 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-224ENST00000483142 CABLES1Q8TDN4 633 aa6.18□□□□□ -1.42
HDAC9-224ENST00000483142 CFAP44Q96MT7 982 aa6.18□□□□□ -1.42
HDAC9-224ENST00000483142 PRDM11Q9NQV5 511 aa6.18□□□□□ -1.42
HDAC9-224ENST00000483142 PAPPAQ13219 1627 aa6.17□□□□□ -1.42
HDAC9-224ENST00000483142 TOGARAM1Q9Y4F4 1720 aa6.17□□□□□ -1.42
HDAC9-224ENST00000483142 EIF4A2Q14240 407 aaKnown RBP6.17□□□□□ -1.42
HDAC9-224ENST00000483142 CFAP53Q96M91 514 aa6.17□□□□□ -1.42
HDAC9-224ENST00000483142 SGIP1Q9BQI5 828 aa6.17□□□□□ -1.42
HDAC9-224ENST00000483142 BCL9O00512 1426 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 SIPA1L3O60292 1781 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-224ENST00000483142 VIRMAQ69YN4 1812 aaKnown RBP6.16□□□□□ -1.42
HDAC9-224ENST00000483142 FAM83GA6ND36 823 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 DCAF8Q5TAQ9 597 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 LMOD2Q6P5Q4 547 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 AXIN2Q9Y2T1 843 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 DLG5Q8TDM6 1919 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 SCN11AQ9UI33 1791 aa6.16□□□□□ -1.42
HDAC9-224ENST00000483142 NHSQ6T4R5 1651 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 GTPBP6O43824 516 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-224ENST00000483142 DIAPH1O60610 1272 aaKnown RBP6.15□□□□□ -1.42
HDAC9-224ENST00000483142 FBLN1P23142 703 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 AMPHP49418 695 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 ZC3H6P61129 1189 aaKnown RBP6.15□□□□□ -1.42
HDAC9-224ENST00000483142 VPS72Q15906 364 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 CCDC184Q52MB2 194 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 PNISRQ8TF01 805 aaKnown RBP6.15□□□□□ -1.42
HDAC9-224ENST00000483142 ANKRD24Q8TF21 1146 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 FAM212AQ96EL1 285 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 DOT1LQ8TEK3 1739 aa6.15□□□□□ -1.42
HDAC9-224ENST00000483142 SPATA31A1Q5TZJ5 1347 aa6.15□□□□□ -1.43
HDAC9-224ENST00000483142 SPATA31A5Q5VU36 1347 aa6.15□□□□□ -1.43
HDAC9-224ENST00000483142 SPATA31A7Q8IWB4 1347 aa6.15□□□□□ -1.43
HDAC9-224ENST00000483142 RGPD3A6NKT7 1758 aaPredicted RBP6.15□□□□□ -1.43
HDAC9-224ENST00000483142 RGPD4Q7Z3J3 1758 aa6.15□□□□□ -1.43
HDAC9-224ENST00000483142 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-224ENST00000483142 CHRNA2Q15822 529 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 BARGINQ6ZT62 677 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 UNC5CLQ8IV45 518 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 EYA1Q99502 592 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 CARD10Q9BWT7 1032 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 RSPH6AQ9H0K4 717 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 MRS2Q9HD23 443 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 THRAP3Q9Y2W1 955 aaKnown RBP6.14□□□□□ -1.43
HDAC9-224ENST00000483142 AFF2P51816 1311 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 RGS12O14924 1447 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 ZNF831Q5JPB2 1677 aa6.14□□□□□ -1.43
HDAC9-224ENST00000483142 KDM3BQ7LBC6 1761 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 UBR2Q8IWV8 1755 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 SOX12O15370 315 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 PLEKHF1Q96S99 279 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 BTG4Q9NY30 223 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 NUDCQ9Y266 331 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
HDAC9-224ENST00000483142 KDM6AO15550 1401 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 FCHSD2O94868 740 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 ADAMTS2O95450 1211 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 NBPF6Q5VWK0 638 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 CHADLQ6NUI6 762 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 LARP1Q6PKG0 1096 aaKnown RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 ILDR1Q86SU0 546 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 SBF2Q86WG5 1849 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 NBPF4Q96M43 638 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
HDAC9-224ENST00000483142 CDCA7Q9BWT1 371 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 TNS1Q9HBL0 1735 aaKnown RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 TRPC5Q9UL62 973 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-224ENST00000483142 LAMB4A4D0S4 1761 aa6.11□□□□□ -1.43
HDAC9-224ENST00000483142 CEMIPQ8WUJ3 1361 aa6.11□□□□□ -1.43
HDAC9-224ENST00000483142 NUTM2BA6NNL0 878 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-224ENST00000483142 NUTM2EB1AL46 878 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-224ENST00000483142 ONECUT3O60422 494 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-224ENST00000483142 ZNF772Q68DY9 489 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-224ENST00000483142 AEBP1Q8IUX7 1158 aa6.11□□□□□ -1.43
HDAC9-224ENST00000483142 NUTM2AQ8IVF1 878 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-224ENST00000483142 TCP11L2Q8N4U5 519 aa6.11□□□□□ -1.43
HDAC9-224ENST00000483142 USP21Q9UK80 565 aa6.11□□□□□ -1.43
HDAC9-224ENST00000483142 MAP3K5Q99683 1374 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 ZNF521Q96K83 1311 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 PCDH11XQ9BZA7 1347 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-224ENST00000483142 PYGBP11216 843 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 IL2RBP14784 551 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 PRKAR2BP31323 418 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.43
HDAC9-224ENST00000483142 NGEFQ8N5V2 710 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 ZFP91Q96JP5 570 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-224ENST00000483142 RGS17Q9UGC6 210 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-224ENST00000483142 FARP1Q9Y4F1 1045 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-224ENST00000483142 ITGB4P16144 1822 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 RREB1Q92766 1687 aa6.1□□□□□ -1.43
HDAC9-224ENST00000483142 LY75O60449 1722 aa6.09□□□□□ -1.43
HDAC9-224ENST00000483142 PPM1GO15355 546 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-224ENST00000483142 U2AF1L5P0DN76 240 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-224ENST00000483142 FXR2P51116 673 aaKnown RBP eCLIP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms