RNA–Protein interactions for RNA: ENST00000482962.5

ARF1-210, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-210ENST00000482962 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
ARF1-210ENST00000482962 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
ARF1-210ENST00000482962 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
ARF1-210ENST00000482962 RGPD3A6NKT7 1758 aaPredicted RBP20.2■□□□□ 0.82
ARF1-210ENST00000482962 RGPD4Q7Z3J3 1758 aa20.2■□□□□ 0.82
ARF1-210ENST00000482962 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
ARF1-210ENST00000482962 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
ARF1-210ENST00000482962 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
ARF1-210ENST00000482962 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
ARF1-210ENST00000482962 BAG6P46379 1132 aa20.18■□□□□ 0.82
ARF1-210ENST00000482962 DOT1LQ8TEK3 1739 aa20.18■□□□□ 0.82
ARF1-210ENST00000482962 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
ARF1-210ENST00000482962 IL13P35225 146 aa20.17■□□□□ 0.82
ARF1-210ENST00000482962 KDRP35968 1356 aa20.17■□□□□ 0.82
ARF1-210ENST00000482962 TRIM37O94972 964 aa20.16■□□□□ 0.82
ARF1-210ENST00000482962 RALBP1Q15311 655 aa20.16■□□□□ 0.82
ARF1-210ENST00000482962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.16■□□□□ 0.82
ARF1-210ENST00000482962 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
ARF1-210ENST00000482962 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
ARF1-210ENST00000482962 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
ARF1-210ENST00000482962 RREB1Q92766 1687 aa20.11■□□□□ 0.81
ARF1-210ENST00000482962 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
ARF1-210ENST00000482962 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
ARF1-210ENST00000482962 BTAF1O14981 1849 aa20.11■□□□□ 0.81
ARF1-210ENST00000482962 APBA3O96018 575 aa20.1■□□□□ 0.81
ARF1-210ENST00000482962 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
ARF1-210ENST00000482962 AEBP1Q8IUX7 1158 aa20.09■□□□□ 0.81
ARF1-210ENST00000482962 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.81
ARF1-210ENST00000482962 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
ARF1-210ENST00000482962 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.81
ARF1-210ENST00000482962 DEFB132Q7Z7B7 95 aa20.08■□□□□ 0.81
ARF1-210ENST00000482962 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
ARF1-210ENST00000482962 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
ARF1-210ENST00000482962 CYP27B1O15528 508 aa20.06■□□□□ 0.8
ARF1-210ENST00000482962 HSP90AB1P08238 724 aaKnown RBP20.06■□□□□ 0.8
ARF1-210ENST00000482962 NUP188Q5SRE5 1749 aa20.05■□□□□ 0.8
ARF1-210ENST00000482962 EN1Q05925 392 aaPredicted RBP20.05■□□□□ 0.8
ARF1-210ENST00000482962 ACSBG1Q96GR2 724 aa20.05■□□□□ 0.8
ARF1-210ENST00000482962 PLSCR1O15162 318 aa20.04■□□□□ 0.8
ARF1-210ENST00000482962 HMOX1P09601 288 aa20.04■□□□□ 0.8
ARF1-210ENST00000482962 PHKG2P15735 406 aa20.04■□□□□ 0.8
ARF1-210ENST00000482962 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
ARF1-210ENST00000482962 C1orf141Q5JVX7 400 aa20.03■□□□□ 0.8
ARF1-210ENST00000482962 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
ARF1-210ENST00000482962 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
ARF1-210ENST00000482962 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
ARF1-210ENST00000482962 ITGB4P16144 1822 aa20.03■□□□□ 0.8
ARF1-210ENST00000482962 KCNQ2O43526 872 aa20.02■□□□□ 0.8
ARF1-210ENST00000482962 CAMKK2Q96RR4 588 aa20.02■□□□□ 0.8
ARF1-210ENST00000482962 KAT6BQ8WYB5 2073 aa20.02■□□□□ 0.8
ARF1-210ENST00000482962 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
ARF1-210ENST00000482962 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.79
ARF1-210ENST00000482962 LY75O60449 1722 aa20■□□□□ 0.79
ARF1-210ENST00000482962 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
ARF1-210ENST00000482962 EZH2Q15910 746 aaKnown RBP20■□□□□ 0.79
ARF1-210ENST00000482962 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
ARF1-210ENST00000482962 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
ARF1-210ENST00000482962 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
ARF1-210ENST00000482962 FCHSD2O94868 740 aa19.97■□□□□ 0.79
ARF1-210ENST00000482962 AKAP4Q5JQC9 854 aa19.97■□□□□ 0.79
ARF1-210ENST00000482962 GAS2L2Q8NHY3 880 aa19.97■□□□□ 0.79
ARF1-210ENST00000482962 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
ARF1-210ENST00000482962 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
ARF1-210ENST00000482962 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
ARF1-210ENST00000482962 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
ARF1-210ENST00000482962 NEFMP07197 916 aa19.96■□□□□ 0.79
ARF1-210ENST00000482962 PRKAR2BP31323 418 aa19.96■□□□□ 0.79
ARF1-210ENST00000482962 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
ARF1-210ENST00000482962 ERVV-2B6SEH9 535 aa19.95■□□□□ 0.78
ARF1-210ENST00000482962 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
ARF1-210ENST00000482962 MRC1P22897 1456 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 HMGB2P26583 209 aaKnown RBP19.94■□□□□ 0.78
ARF1-210ENST00000482962 TXNRD1Q16881 649 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 NBPF14Q5TI25 921 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 MAP3K5Q99683 1374 aa19.94■□□□□ 0.78
ARF1-210ENST00000482962 ANP32CO43423 234 aa19.93■□□□□ 0.78
ARF1-210ENST00000482962 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
ARF1-210ENST00000482962 SLC27A3Q5K4L6 730 aa19.93■□□□□ 0.78
ARF1-210ENST00000482962 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
ARF1-210ENST00000482962 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
ARF1-210ENST00000482962 CABP4P57796 275 aa19.9■□□□□ 0.78
ARF1-210ENST00000482962 WDR43Q15061 677 aaKnown RBP eCLIP19.9■□□□□ 0.78
ARF1-210ENST00000482962 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
ARF1-210ENST00000482962 C5P01031 1676 aa19.9■□□□□ 0.78
ARF1-210ENST00000482962 ZNF831Q5JPB2 1677 aa19.89■□□□□ 0.77
ARF1-210ENST00000482962 PIGBQ92521 554 aa19.89■□□□□ 0.77
ARF1-210ENST00000482962 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
ARF1-210ENST00000482962 PROM2Q8N271 834 aa19.87■□□□□ 0.77
ARF1-210ENST00000482962 CCNL1Q9UK58 526 aaPredicted RBP19.87■□□□□ 0.77
ARF1-210ENST00000482962 QSER1Q2KHR3 1735 aa19.86■□□□□ 0.77
ARF1-210ENST00000482962 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
ARF1-210ENST00000482962 TAF1LQ8IZX4 1826 aa19.86■□□□□ 0.77
ARF1-210ENST00000482962 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
ARF1-210ENST00000482962 CICQ96RK0 1608 aaPredicted RBP19.85■□□□□ 0.77
ARF1-210ENST00000482962 RNMTO43148 476 aaKnown RBP19.85■□□□□ 0.77
ARF1-210ENST00000482962 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
ARF1-210ENST00000482962 STK32BQ9NY57 414 aa19.85■□□□□ 0.77
ARF1-210ENST00000482962 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms