RNA–Protein interactions for RNA: ENST00000482769.1

IGKV2-28-201, Transcript of immunoglobulin kappa variable 2-28, humanhuman

APPRIS P1 BASIC

Gene IGKV2-28, Length 390 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28-201ENST00000482769 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
IGKV2-28-201ENST00000482769 NSD2O96028 1365 aa16.12■□□□□ 0.17
IGKV2-28-201ENST00000482769 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
IGKV2-28-201ENST00000482769 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
IGKV2-28-201ENST00000482769 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
IGKV2-28-201ENST00000482769 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
IGKV2-28-201ENST00000482769 NMRK2Q9NPI5 230 aa16.08■□□□□ 0.16
IGKV2-28-201ENST00000482769 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.16
IGKV2-28-201ENST00000482769 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
IGKV2-28-201ENST00000482769 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
IGKV2-28-201ENST00000482769 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
IGKV2-28-201ENST00000482769 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
IGKV2-28-201ENST00000482769 FAM208AQ9UK61 1670 aaKnown RBP16.06■□□□□ 0.16
IGKV2-28-201ENST00000482769 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
IGKV2-28-201ENST00000482769 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
IGKV2-28-201ENST00000482769 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
IGKV2-28-201ENST00000482769 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
IGKV2-28-201ENST00000482769 PCNTO95613 3336 aa16.05■□□□□ 0.16
IGKV2-28-201ENST00000482769 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
IGKV2-28-201ENST00000482769 KIF13BQ9NQT8 1826 aa16.03■□□□□ 0.16
IGKV2-28-201ENST00000482769 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
IGKV2-28-201ENST00000482769 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
IGKV2-28-201ENST00000482769 TTC21AQ8NDW8 1320 aa16.03■□□□□ 0.16
IGKV2-28-201ENST00000482769 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
IGKV2-28-201ENST00000482769 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
IGKV2-28-201ENST00000482769 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
IGKV2-28-201ENST00000482769 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
IGKV2-28-201ENST00000482769 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
IGKV2-28-201ENST00000482769 USP47Q96K76 1375 aa16■□□□□ 0.15
IGKV2-28-201ENST00000482769 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
IGKV2-28-201ENST00000482769 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
IGKV2-28-201ENST00000482769 PXDNLA1KZ92 1463 aa15.98■□□□□ 0.15
IGKV2-28-201ENST00000482769 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
IGKV2-28-201ENST00000482769 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
IGKV2-28-201ENST00000482769 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
IGKV2-28-201ENST00000482769 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
IGKV2-28-201ENST00000482769 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
IGKV2-28-201ENST00000482769 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
IGKV2-28-201ENST00000482769 MEGF6O75095 1541 aa15.96■□□□□ 0.15
IGKV2-28-201ENST00000482769 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.15
IGKV2-28-201ENST00000482769 FSTL1Q12841 308 aa15.96■□□□□ 0.15
IGKV2-28-201ENST00000482769 SMIM5Q71RC9 77 aa15.96■□□□□ 0.15
IGKV2-28-201ENST00000482769 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
IGKV2-28-201ENST00000482769 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
IGKV2-28-201ENST00000482769 ITGB4P16144 1822 aa15.95■□□□□ 0.14
IGKV2-28-201ENST00000482769 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
IGKV2-28-201ENST00000482769 EVC2Q86UK5 1308 aa15.94■□□□□ 0.14
IGKV2-28-201ENST00000482769 PHF14O94880 888 aa15.93■□□□□ 0.14
IGKV2-28-201ENST00000482769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
IGKV2-28-201ENST00000482769 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
IGKV2-28-201ENST00000482769 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
IGKV2-28-201ENST00000482769 PLEKHG2Q9H7P9 1386 aa15.92■□□□□ 0.14
IGKV2-28-201ENST00000482769 NME9Q86XW9 330 aa15.92■□□□□ 0.14
IGKV2-28-201ENST00000482769 SBF1O95248 1867 aa15.92■□□□□ 0.14
IGKV2-28-201ENST00000482769 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
IGKV2-28-201ENST00000482769 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
IGKV2-28-201ENST00000482769 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
IGKV2-28-201ENST00000482769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
IGKV2-28-201ENST00000482769 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
IGKV2-28-201ENST00000482769 AK7Q96M32 723 aa15.9■□□□□ 0.14
IGKV2-28-201ENST00000482769 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
IGKV2-28-201ENST00000482769 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
IGKV2-28-201ENST00000482769 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
IGKV2-28-201ENST00000482769 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
IGKV2-28-201ENST00000482769 CD163L1Q9NR16 1453 aa15.88■□□□□ 0.13
IGKV2-28-201ENST00000482769 IP6K1Q92551 441 aa15.87■□□□□ 0.13
IGKV2-28-201ENST00000482769 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
IGKV2-28-201ENST00000482769 SMC1BQ8NDV3 1235 aa15.86■□□□□ 0.13
IGKV2-28-201ENST00000482769 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
IGKV2-28-201ENST00000482769 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
IGKV2-28-201ENST00000482769 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
IGKV2-28-201ENST00000482769 MMP10P09238 476 aa15.85■□□□□ 0.13
IGKV2-28-201ENST00000482769 SSFA2P28290 1259 aa15.85■□□□□ 0.13
IGKV2-28-201ENST00000482769 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
IGKV2-28-201ENST00000482769 FCHSD2O94868 740 aa15.84■□□□□ 0.13
IGKV2-28-201ENST00000482769 TGFB2P61812 414 aa15.84■□□□□ 0.13
IGKV2-28-201ENST00000482769 DPEP1P16444 411 aa15.82■□□□□ 0.12
IGKV2-28-201ENST00000482769 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
IGKV2-28-201ENST00000482769 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
IGKV2-28-201ENST00000482769 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
IGKV2-28-201ENST00000482769 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
IGKV2-28-201ENST00000482769 RNF181Q9P0P0 153 aa15.81■□□□□ 0.12
IGKV2-28-201ENST00000482769 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
IGKV2-28-201ENST00000482769 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
IGKV2-28-201ENST00000482769 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
IGKV2-28-201ENST00000482769 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
IGKV2-28-201ENST00000482769 HOXC9P31274 260 aa15.79■□□□□ 0.12
IGKV2-28-201ENST00000482769 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
IGKV2-28-201ENST00000482769 GNPATO15228 680 aa15.78■□□□□ 0.12
IGKV2-28-201ENST00000482769 SMARCC1Q92922 1105 aaPredicted RBP15.78■□□□□ 0.12
IGKV2-28-201ENST00000482769 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
IGKV2-28-201ENST00000482769 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
IGKV2-28-201ENST00000482769 FOXN1O15353 648 aa15.77■□□□□ 0.12
IGKV2-28-201ENST00000482769 KCNA3P22001 575 aa15.77■□□□□ 0.12
IGKV2-28-201ENST00000482769 CGNL1Q0VF96 1302 aa15.76■□□□□ 0.11
IGKV2-28-201ENST00000482769 FBLN1P23142 703 aa15.76■□□□□ 0.11
IGKV2-28-201ENST00000482769 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
IGKV2-28-201ENST00000482769 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
IGKV2-28-201ENST00000482769 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
IGKV2-28-201ENST00000482769 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms