RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
ATG4B-220ENST00000482507 RRS1Q15050 365 aaKnown RBP18.67■□□□□ 0.58
ATG4B-220ENST00000482507 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-220ENST00000482507 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
ATG4B-220ENST00000482507 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 NLRP6P59044 892 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 C8orf58Q8NAV2 365 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-220ENST00000482507 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 GNAI1P63096 354 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 ARHGAP45Q92619 1136 aa18.66■□□□□ 0.58
ATG4B-220ENST00000482507 ABCC4O15439 1325 aa18.65■□□□□ 0.58
ATG4B-220ENST00000482507 MCM4P33991 863 aa18.65■□□□□ 0.58
ATG4B-220ENST00000482507 RBM25P49756 843 aaKnown RBP18.65■□□□□ 0.58
ATG4B-220ENST00000482507 ANKRD45Q5TZF3 282 aa18.65■□□□□ 0.58
ATG4B-220ENST00000482507 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
ATG4B-220ENST00000482507 AATKQ6ZMQ8 1374 aa18.64■□□□□ 0.58
ATG4B-220ENST00000482507 DCTN1Q14203 1278 aa18.64■□□□□ 0.57
ATG4B-220ENST00000482507 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
ATG4B-220ENST00000482507 XIRP1Q702N8 1843 aaKnown RBP18.64■□□□□ 0.57
ATG4B-220ENST00000482507 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
ATG4B-220ENST00000482507 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
ATG4B-220ENST00000482507 DLG5Q8TDM6 1919 aa18.63■□□□□ 0.57
ATG4B-220ENST00000482507 CALD1Q05682 793 aaKnown RBP18.63■□□□□ 0.57
ATG4B-220ENST00000482507 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
ATG4B-220ENST00000482507 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
ATG4B-220ENST00000482507 KIF2CQ99661 725 aa18.62■□□□□ 0.57
ATG4B-220ENST00000482507 AKAP12Q02952 1782 aa18.62■□□□□ 0.57
ATG4B-220ENST00000482507 DCCP43146 1447 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 ITSN1Q15811 1721 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 DDIT3P35638 169 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 HSCBQ8IWL3 235 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 GCC1Q96CN9 775 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 MON2Q7Z3U7 1717 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
ATG4B-220ENST00000482507 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
ATG4B-220ENST00000482507 TBC1D9Q6ZT07 1266 aa18.58■□□□□ 0.57
ATG4B-220ENST00000482507 SNX21Q969T3 373 aa18.58■□□□□ 0.57
ATG4B-220ENST00000482507 GZF1Q9H116 711 aaPredicted RBP18.58■□□□□ 0.57
ATG4B-220ENST00000482507 CD2BP2O95400 341 aaKnown RBP18.58■□□□□ 0.56
ATG4B-220ENST00000482507 KRT24Q2M2I5 525 aa18.58■□□□□ 0.56
ATG4B-220ENST00000482507 LTBP4Q8N2S1 1624 aa18.57■□□□□ 0.56
ATG4B-220ENST00000482507 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
ATG4B-220ENST00000482507 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
ATG4B-220ENST00000482507 ARXQ96QS3 562 aa18.56■□□□□ 0.56
ATG4B-220ENST00000482507 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
ATG4B-220ENST00000482507 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
ATG4B-220ENST00000482507 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
ATG4B-220ENST00000482507 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
ATG4B-220ENST00000482507 FSD2A1L4K1 749 aa18.55■□□□□ 0.56
ATG4B-220ENST00000482507 TRAK2O60296 914 aa18.55■□□□□ 0.56
ATG4B-220ENST00000482507 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
ATG4B-220ENST00000482507 EIF4A2Q14240 407 aaKnown RBP18.54■□□□□ 0.56
ATG4B-220ENST00000482507 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
ATG4B-220ENST00000482507 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
ATG4B-220ENST00000482507 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
ATG4B-220ENST00000482507 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATG4B-220ENST00000482507 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
ATG4B-220ENST00000482507 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 L1TD1Q5T7N2 865 aaKnown RBP18.53■□□□□ 0.56
ATG4B-220ENST00000482507 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-220ENST00000482507 RGS12O14924 1447 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 SULT6B1Q6IMI4 303 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 FAM43AQ8N2R8 423 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 MAP3K19Q56UN5 1328 aa18.53■□□□□ 0.56
ATG4B-220ENST00000482507 USP31Q70CQ4 1352 aa18.52■□□□□ 0.56
ATG4B-220ENST00000482507 PIK3C2AO00443 1686 aa18.52■□□□□ 0.55
ATG4B-220ENST00000482507 MCM10Q7L590 875 aa18.51■□□□□ 0.55
ATG4B-220ENST00000482507 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
ATG4B-220ENST00000482507 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
ATG4B-220ENST00000482507 GOLGA6L3A6NEY3 463 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
ATG4B-220ENST00000482507 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
ATG4B-220ENST00000482507 C16orf71Q8IYS4 520 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-220ENST00000482507 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 DCTPP1Q9H773 170 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 ATP10DQ9P241 1426 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 GCP02774 474 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
ATG4B-220ENST00000482507 KIF24Q5T7B8 1368 aa18.49■□□□□ 0.55
ATG4B-220ENST00000482507 CHL1O00533 1208 aa18.49■□□□□ 0.55
ATG4B-220ENST00000482507 AMPHP49418 695 aa18.49■□□□□ 0.55
ATG4B-220ENST00000482507 ZC3H6P61129 1189 aaKnown RBP18.49■□□□□ 0.55
ATG4B-220ENST00000482507 CDC45O75419 566 aa18.48■□□□□ 0.55
ATG4B-220ENST00000482507 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-220ENST00000482507 PEAK1Q9H792 1746 aa18.48■□□□□ 0.55
ATG4B-220ENST00000482507 RRAGDQ9NQL2 400 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-220ENST00000482507 SPATA31A3Q5VYP0 1347 aa18.47■□□□□ 0.55
ATG4B-220ENST00000482507 RAB3GAP1Q15042 981 aa18.47■□□□□ 0.55
ATG4B-220ENST00000482507 LTV1Q96GA3 475 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-220ENST00000482507 ANKRD44Q8N8A2 993 aa18.47■□□□□ 0.55
ATG4B-220ENST00000482507 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
ATG4B-220ENST00000482507 SOS2Q07890 1332 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-220ENST00000482507 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
ATG4B-220ENST00000482507 K7ELQ4 463 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-220ENST00000482507 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
ATG4B-220ENST00000482507 CIZ1Q9ULV3 898 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-220ENST00000482507 PXDNQ92626 1479 aa18.45■□□□□ 0.54
ATG4B-220ENST00000482507 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms