RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
CALD1-220ENST00000482470 RABEP1Q15276 862 aa11.17□□□□□ -0.62
CALD1-220ENST00000482470 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
CALD1-220ENST00000482470 SRCIN1Q9C0H9 1055 aa11.17□□□□□ -0.62
CALD1-220ENST00000482470 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
CALD1-220ENST00000482470 ERC2O15083 957 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
CALD1-220ENST00000482470 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
CALD1-220ENST00000482470 SSFA2P28290 1259 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 SIL1Q9H173 461 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
CALD1-220ENST00000482470 CEP152O94986 1710 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 SDSP20132 328 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 CAVIN1Q6NZI2 390 aaKnown RBP11.16□□□□□ -0.62
CALD1-220ENST00000482470 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
CALD1-220ENST00000482470 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.62
CALD1-220ENST00000482470 PRR36Q9H6K5 1346 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 MYL6BP14649 208 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
CALD1-220ENST00000482470 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 GPATCH3Q96I76 525 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 ABCA9Q8IUA7 1624 aa11.15□□□□□ -0.62
CALD1-220ENST00000482470 LRRC59Q96AG4 307 aaKnown RBP11.15□□□□□ -0.63
CALD1-220ENST00000482470 LARP6Q9BRS8 491 aaKnown RBP11.15□□□□□ -0.63
CALD1-220ENST00000482470 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
CALD1-220ENST00000482470 DNTTIP2Q5QJE6 756 aaKnown RBP11.14□□□□□ -0.63
CALD1-220ENST00000482470 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 DDX54Q8TDD1 881 aaKnown RBP11.14□□□□□ -0.63
CALD1-220ENST00000482470 NUCB2P80303 420 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
CALD1-220ENST00000482470 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 USP19O94966 1318 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 MSNP26038 577 aaKnown RBP11.14□□□□□ -0.63
CALD1-220ENST00000482470 DCTPP1Q9H773 170 aa11.14□□□□□ -0.63
CALD1-220ENST00000482470 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.638e-9■□□□□ 9.6
CALD1-220ENST00000482470 GOLGA6L4A6NEF3 574 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 CHL1O00533 1208 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 MX1P20591 662 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 CLASRPQ8N2M8 674 aaKnown RBP11.13□□□□□ -0.63
CALD1-220ENST00000482470 RNF214Q8ND24 703 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 ADGRB3O60242 1522 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 INO80Q9ULG1 1556 aaPredicted RBP11.13□□□□□ -0.63
CALD1-220ENST00000482470 PTMSP20962 102 aa11.13□□□□□ -0.63
CALD1-220ENST00000482470 PTPRCP08575 1304 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 LAMC1P11047 1609 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 PI4KAP2A4QPH2 592 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 CWC27Q6UX04 472 aaKnown RBP11.12□□□□□ -0.63
CALD1-220ENST00000482470 PI4KAP1Q8N8J0 262 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 PHAXQ9H814 394 aaKnown RBP11.12□□□□□ -0.63
CALD1-220ENST00000482470 KIDINS220Q9ULH0 1771 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 ATF3P18847 181 aa11.12□□□□□ -0.63
CALD1-220ENST00000482470 MRE11P49959 708 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 TULP4Q9NRJ4 1543 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 GLI2P10070 1586 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
CALD1-220ENST00000482470 SIRT2Q8IXJ6 389 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 JARID2Q92833 1246 aaPredicted RBP11.11□□□□□ -0.63
CALD1-220ENST00000482470 MSH6P52701 1360 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
CALD1-220ENST00000482470 PPP1R42Q7Z4L9 355 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 HDAC5Q9UQL6 1122 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 PDE1AP54750 535 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 GRPEL1Q9HAV7 217 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 CHPF2Q9P2E5 772 aa11.1□□□□□ -0.63
CALD1-220ENST00000482470 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
CALD1-220ENST00000482470 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
CALD1-220ENST00000482470 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
CALD1-220ENST00000482470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
CALD1-220ENST00000482470 HOXC9P31274 260 aa11.09□□□□□ -0.63
CALD1-220ENST00000482470 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
CALD1-220ENST00000482470 MPNDQ8N594 471 aa11.09□□□□□ -0.63
CALD1-220ENST00000482470 FLT4P35916 1363 aa11.09□□□□□ -0.63
CALD1-220ENST00000482470 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
CALD1-220ENST00000482470 GSPT1P15170 499 aaKnown RBP11.08□□□□□ -0.64
CALD1-220ENST00000482470 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
CALD1-220ENST00000482470 HSP90AB4PQ58FF6 505 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 DNAAF4Q8WXU2 420 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 LGR6Q9HBX8 967 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 TTC21AQ8NDW8 1320 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 DTNBO60941 627 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 RUFY2Q8WXA3 655 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
CALD1-220ENST00000482470 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
CALD1-220ENST00000482470 ZKSCAN1P17029 563 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms