RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 NHSQ6T4R5 1651 aa27.41■■□□□ 1.98
CLIP2-205ENST00000482424 RAPGEF4Q8WZA2 1011 aa27.41■■□□□ 1.98
CLIP2-205ENST00000482424 KCNQ2O43526 872 aa27.4■■□□□ 1.98
CLIP2-205ENST00000482424 DDX54Q8TDD1 881 aaKnown RBP27.4■■□□□ 1.98
CLIP2-205ENST00000482424 TATP17735 454 aaPredicted RBP27.39■■□□□ 1.98
CLIP2-205ENST00000482424 EYA1Q99502 592 aa27.38■■□□□ 1.97
CLIP2-205ENST00000482424 NUP188Q5SRE5 1749 aa27.38■■□□□ 1.97
CLIP2-205ENST00000482424 EIF4A2Q14240 407 aaKnown RBP27.37■■□□□ 1.97
CLIP2-205ENST00000482424 ACSBG1Q96GR2 724 aa27.37■■□□□ 1.97
CLIP2-205ENST00000482424 NPC1L1Q9UHC9 1359 aa27.36■■□□□ 1.97
CLIP2-205ENST00000482424 PROM2Q8N271 834 aa27.33■■□□□ 1.97
CLIP2-205ENST00000482424 PKD1L3Q7Z443 1732 aa27.31■■□□□ 1.96
CLIP2-205ENST00000482424 PSDA5PKW4 1024 aaPredicted RBP27.31■■□□□ 1.96
CLIP2-205ENST00000482424 KAT6BQ8WYB5 2073 aa27.31■■□□□ 1.96
CLIP2-205ENST00000482424 BTAF1O14981 1849 aa27.3■■□□□ 1.96
CLIP2-205ENST00000482424 IGSF1Q8N6C5 1336 aa27.3■■□□□ 1.96
CLIP2-205ENST00000482424 R3HDM1Q15032 1099 aaKnown RBP27.29■■□□□ 1.96
CLIP2-205ENST00000482424 CC2D1BQ5T0F9 858 aaKnown RBP27.29■■□□□ 1.96
CLIP2-205ENST00000482424 PCDH11XQ9BZA7 1347 aa27.29■■□□□ 1.96
CLIP2-205ENST00000482424 PCDH11YQ9BZA8 1340 aa27.29■■□□□ 1.96
CLIP2-205ENST00000482424 NBPF14Q5TI25 921 aa27.28■■□□□ 1.96
CLIP2-205ENST00000482424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.28■■□□□ 1.96
CLIP2-205ENST00000482424 DOT1LQ8TEK3 1739 aa27.27■■□□□ 1.96
CLIP2-205ENST00000482424 PLEKHG2Q9H7P9 1386 aa27.27■■□□□ 1.96
CLIP2-205ENST00000482424 CYP27B1O15528 508 aa27.27■■□□□ 1.96
CLIP2-205ENST00000482424 TXNRD1Q16881 649 aa27.27■■□□□ 1.96
CLIP2-205ENST00000482424 PRIM1P49642 420 aaKnown RBP27.26■■□□□ 1.95
CLIP2-205ENST00000482424 SRCAPQ6ZRS2 3230 aa27.25■■□□□ 1.95
CLIP2-205ENST00000482424 MTHFSP49914 203 aa27.24■■□□□ 1.95
CLIP2-205ENST00000482424 SPG7Q9UQ90 795 aa27.24■■□□□ 1.95
CLIP2-205ENST00000482424 IL13P35225 146 aa27.23■■□□□ 1.95
CLIP2-205ENST00000482424 NKX1-1Q15270 411 aaPredicted RBP27.22■■□□□ 1.95
CLIP2-205ENST00000482424 SYTL4Q96C24 671 aaPredicted RBP27.2■■□□□ 1.94
CLIP2-205ENST00000482424 ANO8Q9HCE9 1232 aaPredicted RBP27.2■■□□□ 1.94
CLIP2-205ENST00000482424 LRP5O75197 1615 aa27.18■■□□□ 1.94
CLIP2-205ENST00000482424 KDRP35968 1356 aa27.18■■□□□ 1.94
CLIP2-205ENST00000482424 IFNL2Q8IZJ0 200 aa27.16■■□□□ 1.94
CLIP2-205ENST00000482424 TOGARAM1Q9Y4F4 1720 aa27.16■■□□□ 1.94
CLIP2-205ENST00000482424 PHKG2P15735 406 aa27.15■■□□□ 1.94
CLIP2-205ENST00000482424 SLC27A3Q5K4L6 730 aa27.15■■□□□ 1.94
CLIP2-205ENST00000482424 LRRC4BQ9NT99 713 aa27.15■■□□□ 1.94
CLIP2-205ENST00000482424 LY75O60449 1722 aa27.14■■□□□ 1.94
CLIP2-205ENST00000482424 SULT6B1Q6IMI4 303 aa27.14■■□□□ 1.94
CLIP2-205ENST00000482424 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.94
CLIP2-205ENST00000482424 PAPPAQ13219 1627 aa27.14■■□□□ 1.94
CLIP2-205ENST00000482424 ITGB4P16144 1822 aa27.13■■□□□ 1.93
CLIP2-205ENST00000482424 CNGB1Q14028 1251 aaPredicted RBP27.12■■□□□ 1.93
CLIP2-205ENST00000482424 SLC15A2Q16348 729 aa27.12■■□□□ 1.93
CLIP2-205ENST00000482424 AMOTQ4VCS5 1084 aa27.12■■□□□ 1.93
CLIP2-205ENST00000482424 PLEKHO1Q53GL0 409 aaPredicted RBP27.12■■□□□ 1.93
CLIP2-205ENST00000482424 DIAPH1O60610 1272 aaKnown RBP27.11■■□□□ 1.93
CLIP2-205ENST00000482424 STK32BQ9NY57 414 aa27.11■■□□□ 1.93
CLIP2-205ENST00000482424 COL3A1P02461 1466 aaPredicted RBP27.11■■□□□ 1.93
CLIP2-205ENST00000482424 MPRIPQ6WCQ1 1025 aa27.09■■□□□ 1.93
CLIP2-205ENST00000482424 CASZ1Q86V15 1759 aa27.07■■□□□ 1.92
CLIP2-205ENST00000482424 PIGBQ92521 554 aa27.07■■□□□ 1.92
CLIP2-205ENST00000482424 HSP90AB1P08238 724 aaKnown RBP27.05■■□□□ 1.92
CLIP2-205ENST00000482424 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
CLIP2-205ENST00000482424 PPP2R1AP30153 589 aa27.04■■□□□ 1.92
CLIP2-205ENST00000482424 ZNF530Q6P9A1 599 aaPredicted RBP27.04■■□□□ 1.92
CLIP2-205ENST00000482424 DCAF5Q96JK2 942 aa27.04■■□□□ 1.92
CLIP2-205ENST00000482424 ZNF827Q17R98 1081 aa27.03■■□□□ 1.92
CLIP2-205ENST00000482424 SMARCC1Q92922 1105 aaPredicted RBP27.03■■□□□ 1.92
CLIP2-205ENST00000482424 PDGFDQ9GZP0 370 aaPredicted RBP27.03■■□□□ 1.92
CLIP2-205ENST00000482424 CCNL1Q9UK58 526 aaPredicted RBP27.03■■□□□ 1.92
CLIP2-205ENST00000482424 PALLDQ8WX93 1383 aa27.02■■□□□ 1.92
CLIP2-205ENST00000482424 ERVV-2B6SEH9 535 aa27.02■■□□□ 1.92
CLIP2-205ENST00000482424 HMOX1P09601 288 aa27.02■■□□□ 1.92
CLIP2-205ENST00000482424 KCNQ4P56696 695 aa27.02■■□□□ 1.92
CLIP2-205ENST00000482424 TMOD3Q9NYL9 352 aa27.02■■□□□ 1.92
CLIP2-205ENST00000482424 ZEB1P37275 1124 aaPredicted RBP27■■□□□ 1.91
CLIP2-205ENST00000482424 SPON1Q9HCB6 807 aa27■■□□□ 1.91
CLIP2-205ENST00000482424 KDM6AO15550 1401 aaPredicted RBP26.99■■□□□ 1.91
CLIP2-205ENST00000482424 QSER1Q2KHR3 1735 aa26.99■■□□□ 1.91
CLIP2-205ENST00000482424 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
CLIP2-205ENST00000482424 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
CLIP2-205ENST00000482424 HMGB2P26583 209 aaKnown RBP26.97■■□□□ 1.91
CLIP2-205ENST00000482424 AKAP4Q5JQC9 854 aa26.96■■□□□ 1.91
CLIP2-205ENST00000482424 ASAP1Q9ULH1 1129 aa26.96■■□□□ 1.91
CLIP2-205ENST00000482424 TAF1LQ8IZX4 1826 aa26.95■■□□□ 1.91
CLIP2-205ENST00000482424 U2SURPO15042 1029 aaKnown RBP26.95■■□□□ 1.9
CLIP2-205ENST00000482424 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
CLIP2-205ENST00000482424 C5P01031 1676 aa26.95■■□□□ 1.9
CLIP2-205ENST00000482424 TUBGCP6Q96RT7 1819 aa26.93■■□□□ 1.9
CLIP2-205ENST00000482424 DDX10Q13206 875 aaKnown RBP26.93■■□□□ 1.9
CLIP2-205ENST00000482424 MTHFSDQ2M296 383 aaKnown RBP26.93■■□□□ 1.9
CLIP2-205ENST00000482424 SCN11AQ9UI33 1791 aa26.93■■□□□ 1.9
CLIP2-205ENST00000482424 PNPLA7Q6ZV29 1317 aa26.92■■□□□ 1.9
CLIP2-205ENST00000482424 LOC102724428A0A0B4J2F2 783 aa26.92■■□□□ 1.9
CLIP2-205ENST00000482424 ZBTB7AO95365 584 aa26.92■■□□□ 1.9
CLIP2-205ENST00000482424 SIK1P57059 783 aa26.92■■□□□ 1.9
CLIP2-205ENST00000482424 CABP4P57796 275 aa26.91■■□□□ 1.9
CLIP2-205ENST00000482424 MTFR1LQ9H019 292 aa26.91■■□□□ 1.9
CLIP2-205ENST00000482424 TFCP2L1Q9NZI6 479 aa26.91■■□□□ 1.9
CLIP2-205ENST00000482424 NUDCQ9Y266 331 aa26.91■■□□□ 1.9
CLIP2-205ENST00000482424 PTGER2P43116 358 aa26.89■■□□□ 1.9
CLIP2-205ENST00000482424 SLC16A10Q8TF71 515 aa26.89■■□□□ 1.9
CLIP2-205ENST00000482424 ADAMTS7Q9UKP4 1686 aa26.89■■□□□ 1.89
CLIP2-205ENST00000482424 NFATC2IPQ8NCF5 419 aa26.88■■□□□ 1.89
CLIP2-205ENST00000482424 ZNF831Q5JPB2 1677 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms