RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
LIMK2-209ENST00000482270 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
LIMK2-209ENST00000482270 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
LIMK2-209ENST00000482270 SLC6A16Q9GZN6 736 aa13.72□□□□□ -0.21
LIMK2-209ENST00000482270 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
LIMK2-209ENST00000482270 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
LIMK2-209ENST00000482270 Q3C1V9 767 aa13.71□□□□□ -0.21
LIMK2-209ENST00000482270 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
LIMK2-209ENST00000482270 LTBP4Q8N2S1 1624 aa13.71□□□□□ -0.22
LIMK2-209ENST00000482270 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.22
LIMK2-209ENST00000482270 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
LIMK2-209ENST00000482270 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
LIMK2-209ENST00000482270 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
LIMK2-209ENST00000482270 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
LIMK2-209ENST00000482270 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
LIMK2-209ENST00000482270 UGGT1Q9NYU2 1555 aa13.7□□□□□ -0.22
LIMK2-209ENST00000482270 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
LIMK2-209ENST00000482270 GGCXP38435 758 aa13.69□□□□□ -0.22
LIMK2-209ENST00000482270 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
LIMK2-209ENST00000482270 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
LIMK2-209ENST00000482270 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
LIMK2-209ENST00000482270 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
LIMK2-209ENST00000482270 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
LIMK2-209ENST00000482270 FAM160A2Q8N612 972 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-209ENST00000482270 PCDHB15Q9Y5E8 787 aa13.67□□□□□ -0.22
LIMK2-209ENST00000482270 PIK3C2BO00750 1634 aa13.67□□□□□ -0.22
LIMK2-209ENST00000482270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.67□□□□□ -0.22
LIMK2-209ENST00000482270 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
LIMK2-209ENST00000482270 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
LIMK2-209ENST00000482270 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
LIMK2-209ENST00000482270 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
LIMK2-209ENST00000482270 LIMD1Q9UGP4 676 aa13.66□□□□□ -0.22
LIMK2-209ENST00000482270 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
LIMK2-209ENST00000482270 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
LIMK2-209ENST00000482270 USB1Q9BQ65 265 aaKnown RBP13.65□□□□□ -0.22
LIMK2-209ENST00000482270 KANK1Q14678 1352 aa13.65□□□□□ -0.22
LIMK2-209ENST00000482270 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
LIMK2-209ENST00000482270 ITGAEP38570 1179 aa13.64□□□□□ -0.23
LIMK2-209ENST00000482270 CABLES1Q8TDN4 633 aa13.64□□□□□ -0.23
LIMK2-209ENST00000482270 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
LIMK2-209ENST00000482270 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
LIMK2-209ENST00000482270 SYNMO15061 1565 aa13.63□□□□□ -0.23
LIMK2-209ENST00000482270 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
LIMK2-209ENST00000482270 UNC13BO14795 1591 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 SPTLC1O15269 473 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 CLK2P49760 499 aaKnown RBP13.62□□□□□ -0.23
LIMK2-209ENST00000482270 SALL2Q9Y467 1007 aaPredicted RBP13.62□□□□□ -0.23
LIMK2-209ENST00000482270 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 TET3O43151 1660 aa13.62□□□□□ -0.23
LIMK2-209ENST00000482270 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
LIMK2-209ENST00000482270 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
LIMK2-209ENST00000482270 NPHP4O75161 1426 aaPredicted RBP13.6□□□□□ -0.23
LIMK2-209ENST00000482270 MTMR2Q13614 643 aa13.6□□□□□ -0.23
LIMK2-209ENST00000482270 TSC1Q92574 1164 aa13.6□□□□□ -0.23
LIMK2-209ENST00000482270 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
LIMK2-209ENST00000482270 E9PCH4 1651 aa13.59□□□□□ -0.23
LIMK2-209ENST00000482270 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-209ENST00000482270 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-209ENST00000482270 QPCTQ16769 361 aa13.59□□□□□ -0.23
LIMK2-209ENST00000482270 MSS51Q4VC12 460 aa13.59□□□□□ -0.23
LIMK2-209ENST00000482270 NUTM2DQ5VT03 806 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-209ENST00000482270 RETREG3Q86VR2 466 aa13.59□□□□□ -0.23
LIMK2-209ENST00000482270 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
LIMK2-209ENST00000482270 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
LIMK2-209ENST00000482270 PRKD2Q9BZL6 878 aa13.58□□□□□ -0.24
LIMK2-209ENST00000482270 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
LIMK2-209ENST00000482270 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
LIMK2-209ENST00000482270 MED14O60244 1454 aa13.57□□□□□ -0.24
LIMK2-209ENST00000482270 HRCP23327 699 aa13.57□□□□□ -0.24
LIMK2-209ENST00000482270 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
LIMK2-209ENST00000482270 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
LIMK2-209ENST00000482270 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
LIMK2-209ENST00000482270 PLA2G2CQ5R387 149 aa13.56□□□□□ -0.24
LIMK2-209ENST00000482270 CCDC24Q8N4L8 307 aa13.56□□□□□ -0.24
LIMK2-209ENST00000482270 PROCA1Q8NCQ7 364 aaPredicted RBP13.56□□□□□ -0.24
LIMK2-209ENST00000482270 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
LIMK2-209ENST00000482270 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 SLIT1O75093 1534 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 ANKLE1Q8NAG6 615 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 ROCK1Q13464 1354 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
LIMK2-209ENST00000482270 CPS1P31327 1500 aa13.54□□□□□ -0.24
LIMK2-209ENST00000482270 NOS1P29475 1434 aa13.54□□□□□ -0.24
LIMK2-209ENST00000482270 JUNDP17535 347 aa13.53□□□□□ -0.24
LIMK2-209ENST00000482270 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
LIMK2-209ENST00000482270 CFAP99D6REC4 459 aa13.52□□□□□ -0.25
LIMK2-209ENST00000482270 UBAP1LF5GYI3 381 aa13.52□□□□□ -0.25
LIMK2-209ENST00000482270 LTKP29376 864 aa13.52□□□□□ -0.25
LIMK2-209ENST00000482270 GJA5P36382 358 aa13.52□□□□□ -0.25
LIMK2-209ENST00000482270 IDI1Q13907 227 aa13.52□□□□□ -0.25
LIMK2-209ENST00000482270 SKIV2LQ15477 1246 aaKnown RBP13.52□□□□□ -0.25
LIMK2-209ENST00000482270 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
LIMK2-209ENST00000482270 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
LIMK2-209ENST00000482270 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
LIMK2-209ENST00000482270 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
LIMK2-209ENST00000482270 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
LIMK2-209ENST00000482270 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms