RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 FOXC1Q12948 553 aa15.9■□□□□ 0.14
CUL3-209ENST00000481135 ANKMY2Q8IV38 441 aa15.9■□□□□ 0.14
CUL3-209ENST00000481135 CLDN10P78369 228 aa15.88■□□□□ 0.13
CUL3-209ENST00000481135 CC2D2BQ6DHV5 1058 aa15.88■□□□□ 0.13
CUL3-209ENST00000481135 ZNF594Q96JF6 807 aaPredicted RBP15.88■□□□□ 0.13
CUL3-209ENST00000481135 ZMIZ1Q9ULJ6 1067 aa15.88■□□□□ 0.13
CUL3-209ENST00000481135 WASF2Q9Y6W5 498 aa15.87■□□□□ 0.13
CUL3-209ENST00000481135 ALDH1A1P00352 501 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 ERVK-9P63128 1117 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 TMEM164Q5U3C3 297 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 B4GALNT3Q6L9W6 998 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 SIX5Q8N196 739 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 SNIP1Q8TAD8 396 aaKnown RBP15.86■□□□□ 0.13
CUL3-209ENST00000481135 STK32AQ8WU08 396 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 PGPEP1Q9NXJ5 209 aa15.86■□□□□ 0.13
CUL3-209ENST00000481135 TMEM88BA6NKF7 163 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 PATL2C9JE40 543 aaKnown RBP15.85■□□□□ 0.13
CUL3-209ENST00000481135 MYT1Q01538 1121 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 DPYDQ12882 1025 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 CCDC102BQ68D86 513 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 PCDHGA11Q9Y5H2 935 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 EMILIN1Q9Y6C2 1016 aa15.85■□□□□ 0.13
CUL3-209ENST00000481135 PPP1R26Q5T8A7 1209 aaPredicted RBP15.84■□□□□ 0.13
CUL3-209ENST00000481135 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
CUL3-209ENST00000481135 PKD2L1Q9P0L9 805 aa15.84■□□□□ 0.13
CUL3-209ENST00000481135 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
CUL3-209ENST00000481135 BRD1O95696 1058 aa15.83■□□□□ 0.12
CUL3-209ENST00000481135 SEC13P55735 322 aa15.83■□□□□ 0.12
CUL3-209ENST00000481135 TMPRSS4Q9NRS4 437 aa15.83■□□□□ 0.12
CUL3-209ENST00000481135 TPCN2Q8NHX9 752 aa15.82■□□□□ 0.12
CUL3-209ENST00000481135 CYLDQ9NQC7 956 aa15.82■□□□□ 0.12
CUL3-209ENST00000481135 TTC24A2A3L6 582 aaPredicted RBP15.81■□□□□ 0.12
CUL3-209ENST00000481135 SCTRP47872 440 aa15.81■□□□□ 0.12
CUL3-209ENST00000481135 CYP4X1Q8N118 509 aa15.81■□□□□ 0.12
CUL3-209ENST00000481135 ZNF784Q8NCA9 323 aaPredicted RBP15.81■□□□□ 0.12
CUL3-209ENST00000481135 TRIM26Q12899 539 aaPredicted RBP15.8■□□□□ 0.12
CUL3-209ENST00000481135 SWI5Q1ZZU3 235 aa15.8■□□□□ 0.12
CUL3-209ENST00000481135 KIAA1024Q9UPX6 916 aa15.8■□□□□ 0.12
CUL3-209ENST00000481135 NNTQ13423 1086 aa15.79■□□□□ 0.12
CUL3-209ENST00000481135 CARNS1A5YM72 827 aa15.78■□□□□ 0.12
CUL3-209ENST00000481135 NR3C2P08235 984 aa15.78■□□□□ 0.12
CUL3-209ENST00000481135 CYP2U1Q7Z449 544 aa15.78■□□□□ 0.12
CUL3-209ENST00000481135 GDF9O60383 454 aa15.76■□□□□ 0.11
CUL3-209ENST00000481135 KCNA1Q09470 495 aa15.76■□□□□ 0.11
CUL3-209ENST00000481135 OSBPL3Q9H4L5 887 aa15.76■□□□□ 0.11
CUL3-209ENST00000481135 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
CUL3-209ENST00000481135 DKK1O94907 266 aa15.74■□□□□ 0.11
CUL3-209ENST00000481135 SFI1A8K8P3 1242 aa15.73■□□□□ 0.11
CUL3-209ENST00000481135 M0R2N6 131 aa15.73■□□□□ 0.11
CUL3-209ENST00000481135 LILRA1O75019 489 aa15.73■□□□□ 0.11
CUL3-209ENST00000481135 TNFRSF10AO00220 468 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 BACH1O14867 736 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 RGS20O76081 388 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 GNRH1P01148 92 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 PRR20EP86478 221 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 PRR20CP86479 221 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 PRR20DP86480 221 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 PRR20BP86481 221 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 PRR20AP86496 221 aa15.72■□□□□ 0.11
CUL3-209ENST00000481135 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
CUL3-209ENST00000481135 ESCO1Q5FWF5 840 aa15.71■□□□□ 0.11
CUL3-209ENST00000481135 HINFPQ9BQA5 517 aa15.71■□□□□ 0.11
CUL3-209ENST00000481135 TOR4AQ9NXH8 423 aa15.71■□□□□ 0.11
CUL3-209ENST00000481135 J3QL48 77 aa15.69■□□□□ 0.1
CUL3-209ENST00000481135 GDF10P55107 478 aa15.69■□□□□ 0.1
CUL3-209ENST00000481135 WASLO00401 505 aaPredicted RBP15.68■□□□□ 0.1
CUL3-209ENST00000481135 ADD1P35611 737 aaKnown RBP15.68■□□□□ 0.1
CUL3-209ENST00000481135 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
CUL3-209ENST00000481135 ATP2B4P23634 1241 aa15.67■□□□□ 0.1
CUL3-209ENST00000481135 WDR4P57081 412 aaKnown RBP15.67■□□□□ 0.1
CUL3-209ENST00000481135 ZNF358Q9NW07 568 aa15.67■□□□□ 0.1
CUL3-209ENST00000481135 PODXL2Q9NZ53 605 aa15.67■□□□□ 0.1
CUL3-209ENST00000481135 ZIC2O95409 532 aaPredicted RBP15.66■□□□□ 0.1
CUL3-209ENST00000481135 ADH1AP07327 375 aa15.66■□□□□ 0.1
CUL3-209ENST00000481135 TMEM229AB2RXF0 380 aa15.65■□□□□ 0.1
CUL3-209ENST00000481135 INHAP05111 366 aa15.65■□□□□ 0.1
CUL3-209ENST00000481135 ITPKCQ96DU7 683 aa15.65■□□□□ 0.1
CUL3-209ENST00000481135 SMPD1P17405 629 aa15.64■□□□□ 0.09
CUL3-209ENST00000481135 SSFA2P28290 1259 aa15.64■□□□□ 0.09
CUL3-209ENST00000481135 SCNN1DP51172 638 aa15.64■□□□□ 0.09
CUL3-209ENST00000481135 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
CUL3-209ENST00000481135 ETNK1Q9HBU6 452 aa15.63■□□□□ 0.09
CUL3-209ENST00000481135 TRIM67Q6ZTA4 783 aa15.62■□□□□ 0.09
CUL3-209ENST00000481135 Q6ZVU0 165 aa15.62■□□□□ 0.09
CUL3-209ENST00000481135 KLF16Q9BXK1 252 aaPredicted RBP15.62■□□□□ 0.09
CUL3-209ENST00000481135 PRMT3O60678 531 aa15.61■□□□□ 0.09
CUL3-209ENST00000481135 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
CUL3-209ENST00000481135 TIMP2P16035 220 aa15.6■□□□□ 0.09
CUL3-209ENST00000481135 CBLBQ13191 982 aa15.6■□□□□ 0.09
CUL3-209ENST00000481135 ARHGEF10LQ9HCE6 1279 aa15.6■□□□□ 0.09
CUL3-209ENST00000481135 SERTAD1Q9UHV2 236 aa15.6■□□□□ 0.09
CUL3-209ENST00000481135 MTMR7Q9Y216 660 aa15.6■□□□□ 0.09
CUL3-209ENST00000481135 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
CUL3-209ENST00000481135 C1orf216Q8TAB5 229 aa15.59■□□□□ 0.09
CUL3-209ENST00000481135 SLC4A9Q96Q91 983 aa15.59■□□□□ 0.09
CUL3-209ENST00000481135 ZFAND3Q9H8U3 227 aa15.59■□□□□ 0.09
CUL3-209ENST00000481135 PRIMPOLQ96LW4 560 aa15.58■□□□□ 0.08
CUL3-209ENST00000481135 CXXC1Q9P0U4 656 aaPredicted RBP15.58■□□□□ 0.08
CUL3-209ENST00000481135 SLAIN2Q9P270 581 aa15.58■□□□□ 0.08
CUL3-209ENST00000481135 PDZRN3Q9UPQ7 1066 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms