RNA–Protein interactions for RNA: ENST00000481081.1

CASQ1-203, Transcript of calsequestrin 1, humanhuman

TSL 2

Gene CASQ1, Length 869 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1-203ENST00000481081 CICQ96RK0 1608 aaPredicted RBP10.52□□□□□ -0.73
CASQ1-203ENST00000481081 MSH5O43196 834 aa10.52□□□□□ -0.73
CASQ1-203ENST00000481081 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.73
CASQ1-203ENST00000481081 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.73
CASQ1-203ENST00000481081 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.73
CASQ1-203ENST00000481081 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
CASQ1-203ENST00000481081 USP31Q70CQ4 1352 aa10.52□□□□□ -0.73
CASQ1-203ENST00000481081 DOT1LQ8TEK3 1739 aa10.51□□□□□ -0.73
CASQ1-203ENST00000481081 HTRA3P83110 453 aa10.51□□□□□ -0.73
CASQ1-203ENST00000481081 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
CASQ1-203ENST00000481081 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
CASQ1-203ENST00000481081 SYTL4Q96C24 671 aaPredicted RBP10.5□□□□□ -0.73
CASQ1-203ENST00000481081 WWC3Q9ULE0 1092 aa10.5□□□□□ -0.73
CASQ1-203ENST00000481081 RAB3GAP2Q9H2M9 1393 aa10.5□□□□□ -0.73
CASQ1-203ENST00000481081 LTN1O94822 1766 aa10.49□□□□□ -0.73
CASQ1-203ENST00000481081 SLC34A2O95436 690 aa10.48□□□□□ -0.73
CASQ1-203ENST00000481081 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
CASQ1-203ENST00000481081 FLAD1Q8NFF5 587 aa10.48□□□□□ -0.73
CASQ1-203ENST00000481081 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
CASQ1-203ENST00000481081 NMRK2Q9NPI5 230 aa10.48□□□□□ -0.73
CASQ1-203ENST00000481081 EVC2Q86UK5 1308 aa10.48□□□□□ -0.73
CASQ1-203ENST00000481081 C5P01031 1676 aa10.47□□□□□ -0.73
CASQ1-203ENST00000481081 TAF1LQ8IZX4 1826 aa10.47□□□□□ -0.73
CASQ1-203ENST00000481081 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
CASQ1-203ENST00000481081 MON2Q7Z3U7 1717 aa10.47□□□□□ -0.73
CASQ1-203ENST00000481081 USP47Q96K76 1375 aa10.46□□□□□ -0.74
CASQ1-203ENST00000481081 TOGARAM1Q9Y4F4 1720 aa10.46□□□□□ -0.74
CASQ1-203ENST00000481081 FAM208AQ9UK61 1670 aaKnown RBP10.45□□□□□ -0.74
CASQ1-203ENST00000481081 NME9Q86XW9 330 aa10.45□□□□□ -0.74
CASQ1-203ENST00000481081 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
CASQ1-203ENST00000481081 IP6K1Q92551 441 aa10.45□□□□□ -0.74
CASQ1-203ENST00000481081 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
CASQ1-203ENST00000481081 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
CASQ1-203ENST00000481081 FSTL1Q12841 308 aa10.44□□□□□ -0.74
CASQ1-203ENST00000481081 SMIM5Q71RC9 77 aa10.44□□□□□ -0.74
CASQ1-203ENST00000481081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
CASQ1-203ENST00000481081 UBR3Q6ZT12 1888 aa10.44□□□□□ -0.74
CASQ1-203ENST00000481081 MEGF6O75095 1541 aa10.43□□□□□ -0.74
CASQ1-203ENST00000481081 PXDNLA1KZ92 1463 aa10.43□□□□□ -0.74
CASQ1-203ENST00000481081 CD163L1Q9NR16 1453 aa10.43□□□□□ -0.74
CASQ1-203ENST00000481081 C4BP0C0L5 1744 aa10.43□□□□□ -0.74
CASQ1-203ENST00000481081 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
CASQ1-203ENST00000481081 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
CASQ1-203ENST00000481081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
CASQ1-203ENST00000481081 HMGB2P26583 209 aaKnown RBP10.41□□□□□ -0.74
CASQ1-203ENST00000481081 LTV1Q96GA3 475 aaPredicted RBP10.41□□□□□ -0.74
CASQ1-203ENST00000481081 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
CASQ1-203ENST00000481081 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
CASQ1-203ENST00000481081 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
CASQ1-203ENST00000481081 HSPA1AP0DMV8 641 aaKnown RBP10.4□□□□□ -0.74
CASQ1-203ENST00000481081 HSPA1BP0DMV9 641 aaKnown RBP10.4□□□□□ -0.74
CASQ1-203ENST00000481081 TGFB2P61812 414 aa10.4□□□□□ -0.74
CASQ1-203ENST00000481081 AK7Q96M32 723 aa10.4□□□□□ -0.74
CASQ1-203ENST00000481081 PHF14O94880 888 aa10.39□□□□□ -0.75
CASQ1-203ENST00000481081 SSFA2P28290 1259 aa10.39□□□□□ -0.75
CASQ1-203ENST00000481081 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
CASQ1-203ENST00000481081 BCS1LQ9Y276 419 aa10.39□□□□□ -0.75
CASQ1-203ENST00000481081 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
CASQ1-203ENST00000481081 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
CASQ1-203ENST00000481081 MAP2P11137 1827 aaKnown RBP10.38□□□□□ -0.75
CASQ1-203ENST00000481081 A0A0G2JLW4 131 aa10.38□□□□□ -0.75
CASQ1-203ENST00000481081 HOXC9P31274 260 aa10.38□□□□□ -0.75
CASQ1-203ENST00000481081 C9orf131Q5VYM1 1079 aa10.38□□□□□ -0.75
CASQ1-203ENST00000481081 C16orf71Q8IYS4 520 aaPredicted RBP10.38□□□□□ -0.75
CASQ1-203ENST00000481081 PLEKHG2Q9H7P9 1386 aa10.38□□□□□ -0.75
CASQ1-203ENST00000481081 CGNL1Q0VF96 1302 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 MAP3K19Q56UN5 1328 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 MMP10P09238 476 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 KCNA3P22001 575 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
CASQ1-203ENST00000481081 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 RRAGCQ9HB90 399 aa10.37□□□□□ -0.75
CASQ1-203ENST00000481081 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 ITGB4P16144 1822 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 DPEP1P16444 411 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 FBLN1P23142 703 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
CASQ1-203ENST00000481081 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
CASQ1-203ENST00000481081 ARFGEF1Q9Y6D6 1849 aa10.35□□□□□ -0.75
CASQ1-203ENST00000481081 FCHSD2O94868 740 aa10.35□□□□□ -0.75
CASQ1-203ENST00000481081 SMC1BQ8NDV3 1235 aa10.35□□□□□ -0.75
CASQ1-203ENST00000481081 TNRC6CQ9HCJ0 1690 aaKnown RBP10.34□□□□□ -0.75
CASQ1-203ENST00000481081 KDM2BQ8NHM5 1336 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 CYP27B1O15528 508 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 USHBP1Q8N6Y0 703 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 PIGBQ92521 554 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 A0A1W2PP64 1363 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 SBF1O95248 1867 aa10.34□□□□□ -0.75
CASQ1-203ENST00000481081 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 AMPHP49418 695 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 SIK1P57059 783 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 ITPK1Q13572 414 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
CASQ1-203ENST00000481081 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
CASQ1-203ENST00000481081 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms