RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GIGYF2Q6Y7W6 1299 aaKnown RBP10.33□□□□□ -0.76
LRCH3-216ENST00000481048 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
LRCH3-216ENST00000481048 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
LRCH3-216ENST00000481048 WASF2Q9Y6W5 498 aa10.33□□□□□ -0.76
LRCH3-216ENST00000481048 MTUS2Q5JR59 1369 aa10.33□□□□□ -0.76
LRCH3-216ENST00000481048 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
LRCH3-216ENST00000481048 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
LRCH3-216ENST00000481048 MROH2AA6NES4 1674 aa10.32□□□□□ -0.76
LRCH3-216ENST00000481048 HNRNPMP52272 730 aaKnown RBP eCLIP10.32□□□□□ -0.76
LRCH3-216ENST00000481048 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
LRCH3-216ENST00000481048 BEGAINQ9BUH8 593 aa10.32□□□□□ -0.76
LRCH3-216ENST00000481048 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
LRCH3-216ENST00000481048 EVA1BQ9NVM1 165 aa10.32□□□□□ -0.76
LRCH3-216ENST00000481048 MTMR2Q13614 643 aa10.31□□□□□ -0.76
LRCH3-216ENST00000481048 SYCP2Q9BX26 1530 aa10.31□□□□□ -0.76
LRCH3-216ENST00000481048 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
LRCH3-216ENST00000481048 BAP1Q92560 729 aa10.3□□□□□ -0.76
LRCH3-216ENST00000481048 NPATQ14207 1427 aa10.3□□□□□ -0.76
LRCH3-216ENST00000481048 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
LRCH3-216ENST00000481048 ZMYM3Q14202 1370 aa10.29□□□□□ -0.76
LRCH3-216ENST00000481048 ATP7AQ04656 1500 aa10.29□□□□□ -0.76
LRCH3-216ENST00000481048 SPDYE5A6NIY4 337 aa10.29□□□□□ -0.76
LRCH3-216ENST00000481048 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
LRCH3-216ENST00000481048 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
LRCH3-216ENST00000481048 PTPRTO14522 1441 aa10.29□□□□□ -0.76
LRCH3-216ENST00000481048 ADGBQ8N7X0 1667 aa10.28□□□□□ -0.76
LRCH3-216ENST00000481048 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
LRCH3-216ENST00000481048 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
LRCH3-216ENST00000481048 CAPN5O15484 640 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-216ENST00000481048 A2MP01023 1474 aa10.28□□□□□ -0.76
LRCH3-216ENST00000481048 EHBP1L1Q8N3D4 1523 aa10.28□□□□□ -0.76
LRCH3-216ENST00000481048 INO80Q9ULG1 1556 aaPredicted RBP10.27□□□□□ -0.76
LRCH3-216ENST00000481048 BMP1P13497 986 aa10.27□□□□□ -0.77
LRCH3-216ENST00000481048 DESI1Q6ICB0 168 aa10.27□□□□□ -0.77
LRCH3-216ENST00000481048 TBC1D2Q9BYX2 928 aa10.27□□□□□ -0.77
LRCH3-216ENST00000481048 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
LRCH3-216ENST00000481048 WIPF1O43516 503 aa10.26□□□□□ -0.77
LRCH3-216ENST00000481048 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
LRCH3-216ENST00000481048 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 GGT6Q6P531 493 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
LRCH3-216ENST00000481048 TRIM46Q7Z4K8 759 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 ZNF511Q8NB15 262 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 TLL2Q9Y6L7 1015 aa10.25□□□□□ -0.77
LRCH3-216ENST00000481048 CTHP32929 405 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 GJA5P36382 358 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 LCE2CQ5TA81 110 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 CLTCQ00610 1675 aaKnown RBP10.24□□□□□ -0.77
LRCH3-216ENST00000481048 DHX29Q7Z478 1369 aaKnown RBP10.24□□□□□ -0.77
LRCH3-216ENST00000481048 NCOA1Q15788 1441 aa10.24□□□□□ -0.77
LRCH3-216ENST00000481048 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
LRCH3-216ENST00000481048 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-216ENST00000481048 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
LRCH3-216ENST00000481048 TRIM66O15016 1216 aa10.22□□□□□ -0.77
LRCH3-216ENST00000481048 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
LRCH3-216ENST00000481048 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
LRCH3-216ENST00000481048 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
LRCH3-216ENST00000481048 CAMSAP1Q5T5Y3 1602 aa10.22□□□□□ -0.77
LRCH3-216ENST00000481048 ZNF142P52746 1687 aaPredicted RBP10.22□□□□□ -0.77
LRCH3-216ENST00000481048 CFAP99D6REC4 459 aa10.21□□□□□ -0.77
LRCH3-216ENST00000481048 TSPY4P0CV99 314 aa10.21□□□□□ -0.77
LRCH3-216ENST00000481048 TSPY10P0CW01 314 aa10.21□□□□□ -0.77
LRCH3-216ENST00000481048 PTPRKQ15262 1439 aa10.21□□□□□ -0.78
LRCH3-216ENST00000481048 PLA2R1Q13018 1463 aa10.21□□□□□ -0.78
LRCH3-216ENST00000481048 FAM135AQ9P2D6 1515 aa10.21□□□□□ -0.78
LRCH3-216ENST00000481048 SPTLC1O15269 473 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 HRCP23327 699 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 CCDC141Q6ZP82 1450 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 ZBTB3Q9H5J0 574 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 STK17AQ9UEE5 414 aa10.2□□□□□ -0.78
LRCH3-216ENST00000481048 NNTQ13423 1086 aa10.19□□□□□ -0.78
LRCH3-216ENST00000481048 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
LRCH3-216ENST00000481048 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
LRCH3-216ENST00000481048 AK7Q96M32 723 aa10.19□□□□□ -0.78
LRCH3-216ENST00000481048 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
LRCH3-216ENST00000481048 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 ARHGEF5Q12774 1597 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 MAP3K1Q13233 1512 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 KIF3BO15066 747 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 MPNDQ8N594 471 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
LRCH3-216ENST00000481048 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-216ENST00000481048 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 FAM174AQ8TBP5 190 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 MAP10Q9P2G4 905 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 TCOF1Q13428 1488 aaKnown RBP10.17□□□□□ -0.78
LRCH3-216ENST00000481048 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
LRCH3-216ENST00000481048 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
LRCH3-216ENST00000481048 PRPF38BQ5VTL8 546 aaKnown RBP10.16□□□□□ -0.78
LRCH3-216ENST00000481048 FOXJ1Q92949 421 aa10.16□□□□□ -0.78
LRCH3-216ENST00000481048 DNMT1P26358 1616 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms