RNA–Protein interactions for RNA: ENST00000480767.1

CDC42BPG-203, Transcript of CDC42 binding protein kinase gamma, humanhuman

TSL 3

Gene CDC42BPG, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-203ENST00000480767 PKD1L3Q7Z443 1732 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 PCDH11XQ9BZA7 1347 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 PCDH11YQ9BZA8 1340 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 SBF2Q86WG5 1849 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 COL3A1P02461 1466 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 PPP2R1AP30153 589 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 BAG6P46379 1132 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 KDRP35968 1356 aa21.6■■□□□ 1.05
CDC42BPG-203ENST00000480767 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
CDC42BPG-203ENST00000480767 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
CDC42BPG-203ENST00000480767 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
CDC42BPG-203ENST00000480767 BCL11BQ9C0K0 894 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPG-203ENST00000480767 RALBP1Q15311 655 aa21.57■■□□□ 1.04
CDC42BPG-203ENST00000480767 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
CDC42BPG-203ENST00000480767 SPG7Q9UQ90 795 aa21.57■■□□□ 1.04
CDC42BPG-203ENST00000480767 NHSQ6T4R5 1651 aa21.56■■□□□ 1.04
CDC42BPG-203ENST00000480767 SULT6B1Q6IMI4 303 aa21.54■■□□□ 1.04
CDC42BPG-203ENST00000480767 DEFB132Q7Z7B7 95 aa21.54■■□□□ 1.04
CDC42BPG-203ENST00000480767 RGPD3A6NKT7 1758 aaPredicted RBP21.53■■□□□ 1.04
CDC42BPG-203ENST00000480767 RGPD4Q7Z3J3 1758 aa21.53■■□□□ 1.04
CDC42BPG-203ENST00000480767 APBA3O96018 575 aa21.53■■□□□ 1.04
CDC42BPG-203ENST00000480767 AMOTQ4VCS5 1084 aa21.52■■□□□ 1.04
CDC42BPG-203ENST00000480767 PLSCR1O15162 318 aa21.51■■□□□ 1.03
CDC42BPG-203ENST00000480767 CYP27B1O15528 508 aa21.51■■□□□ 1.03
CDC42BPG-203ENST00000480767 AEBP1Q8IUX7 1158 aa21.51■■□□□ 1.03
CDC42BPG-203ENST00000480767 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPG-203ENST00000480767 PLEKHO1Q53GL0 409 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPG-203ENST00000480767 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
CDC42BPG-203ENST00000480767 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
CDC42BPG-203ENST00000480767 IFNL2Q8IZJ0 200 aa21.49■■□□□ 1.03
CDC42BPG-203ENST00000480767 ACSBG1Q96GR2 724 aa21.49■■□□□ 1.03
CDC42BPG-203ENST00000480767 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
CDC42BPG-203ENST00000480767 DOT1LQ8TEK3 1739 aa21.49■■□□□ 1.03
CDC42BPG-203ENST00000480767 KCNQ2O43526 872 aa21.48■■□□□ 1.03
CDC42BPG-203ENST00000480767 PHKG2P15735 406 aa21.47■■□□□ 1.03
CDC42BPG-203ENST00000480767 MYBBP1AQ9BQG0 1328 aaKnown RBP21.47■■□□□ 1.03
CDC42BPG-203ENST00000480767 U2SURPO15042 1029 aaKnown RBP21.46■■□□□ 1.03
CDC42BPG-203ENST00000480767 PTF1AQ7RTS3 328 aa21.46■■□□□ 1.03
CDC42BPG-203ENST00000480767 RREB1Q92766 1687 aa21.46■■□□□ 1.03
CDC42BPG-203ENST00000480767 HSP90AB1P08238 724 aaKnown RBP21.45■■□□□ 1.02
CDC42BPG-203ENST00000480767 HMOX1P09601 288 aa21.45■■□□□ 1.02
CDC42BPG-203ENST00000480767 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
CDC42BPG-203ENST00000480767 BTAF1O14981 1849 aa21.45■■□□□ 1.02
CDC42BPG-203ENST00000480767 PRIM1P49642 420 aaKnown RBP21.44■■□□□ 1.02
CDC42BPG-203ENST00000480767 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
CDC42BPG-203ENST00000480767 KAT6BQ8WYB5 2073 aa21.43■■□□□ 1.02
CDC42BPG-203ENST00000480767 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
CDC42BPG-203ENST00000480767 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
CDC42BPG-203ENST00000480767 SYTL4Q96C24 671 aaPredicted RBP21.42■■□□□ 1.02
CDC42BPG-203ENST00000480767 TOGARAM1Q9Y4F4 1720 aa21.42■■□□□ 1.02
CDC42BPG-203ENST00000480767 DCAF5Q96JK2 942 aa21.41■■□□□ 1.02
CDC42BPG-203ENST00000480767 FCHSD2O94868 740 aa21.4■■□□□ 1.02
CDC42BPG-203ENST00000480767 U2AF1L5P0DN76 240 aaPredicted RBP21.4■■□□□ 1.02
CDC42BPG-203ENST00000480767 U2AF1Q01081 240 aaKnown RBP eCLIP21.4■■□□□ 1.02
CDC42BPG-203ENST00000480767 NUP188Q5SRE5 1749 aa21.4■■□□□ 1.02
CDC42BPG-203ENST00000480767 AKAP4Q5JQC9 854 aa21.39■■□□□ 1.01
CDC42BPG-203ENST00000480767 RSPH6AQ9H0K4 717 aa21.39■■□□□ 1.01
CDC42BPG-203ENST00000480767 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
CDC42BPG-203ENST00000480767 ITGB4P16144 1822 aa21.37■■□□□ 1.01
CDC42BPG-203ENST00000480767 KDM6AO15550 1401 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPG-203ENST00000480767 PRKAR2BP31323 418 aa21.36■■□□□ 1.01
CDC42BPG-203ENST00000480767 TXNRD1Q16881 649 aa21.36■■□□□ 1.01
CDC42BPG-203ENST00000480767 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
CDC42BPG-203ENST00000480767 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
CDC42BPG-203ENST00000480767 SLC27A3Q5K4L6 730 aa21.35■■□□□ 1.01
CDC42BPG-203ENST00000480767 MPRIPQ6WCQ1 1025 aa21.35■■□□□ 1.01
CDC42BPG-203ENST00000480767 PROM2Q8N271 834 aa21.35■■□□□ 1.01
CDC42BPG-203ENST00000480767 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
CDC42BPG-203ENST00000480767 NBPF14Q5TI25 921 aa21.34■■□□□ 1.01
CDC42BPG-203ENST00000480767 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
CDC42BPG-203ENST00000480767 LY75O60449 1722 aa21.34■■□□□ 1.01
CDC42BPG-203ENST00000480767 HMGB2P26583 209 aaKnown RBP21.33■■□□□ 1.01
CDC42BPG-203ENST00000480767 PIGBQ92521 554 aa21.33■■□□□ 1.01
CDC42BPG-203ENST00000480767 SMARCC1Q92922 1105 aaPredicted RBP21.33■■□□□ 1.01
CDC42BPG-203ENST00000480767 ADAMTS7Q9UKP4 1686 aa21.32■■□□□ 1
CDC42BPG-203ENST00000480767 SCN11AQ9UI33 1791 aa21.32■■□□□ 1
CDC42BPG-203ENST00000480767 PALLDQ8WX93 1383 aa21.31■■□□□ 1
CDC42BPG-203ENST00000480767 MAP3K5Q99683 1374 aa21.31■■□□□ 1
CDC42BPG-203ENST00000480767 MRC1P22897 1456 aa21.31■■□□□ 1
CDC42BPG-203ENST00000480767 ANP32CO43423 234 aa21.3■■□□□ 1
CDC42BPG-203ENST00000480767 NEFMP07197 916 aa21.3■■□□□ 1
CDC42BPG-203ENST00000480767 PAPPAQ13219 1627 aa21.29■■□□□ 1
CDC42BPG-203ENST00000480767 CABP4P57796 275 aa21.29■■□□□ 1
CDC42BPG-203ENST00000480767 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
CDC42BPG-203ENST00000480767 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
CDC42BPG-203ENST00000480767 RNMTO43148 476 aaKnown RBP21.27■■□□□ 1
CDC42BPG-203ENST00000480767 PLEKHF1Q96S99 279 aa21.27■■□□□ 1
CDC42BPG-203ENST00000480767 LRRC4BQ9NT99 713 aa21.27■■□□□ 1
CDC42BPG-203ENST00000480767 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
CDC42BPG-203ENST00000480767 SLC52A2Q9HAB3 445 aa21.26■□□□□ 0.99
CDC42BPG-203ENST00000480767 VIRMAQ69YN4 1812 aaKnown RBP21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 R3HDM1Q15032 1099 aaKnown RBP21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 STK32BQ9NY57 414 aa21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
CDC42BPG-203ENST00000480767 HTATSF1O43719 755 aaKnown RBP21.24■□□□□ 0.99
CDC42BPG-203ENST00000480767 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
CDC42BPG-203ENST00000480767 ANO8Q9HCE9 1232 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms