RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
CHD6-208ENST00000480022 CD163L1Q9NR16 1453 aa13.49□□□□□ -0.25
CHD6-208ENST00000480022 ACEP12821 1306 aa13.48□□□□□ -0.25
CHD6-208ENST00000480022 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
CHD6-208ENST00000480022 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
CHD6-208ENST00000480022 PANK1Q8TE04 598 aa13.48□□□□□ -0.25
CHD6-208ENST00000480022 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
CHD6-208ENST00000480022 MYOM1P52179 1685 aa13.48□□□□□ -0.25
CHD6-208ENST00000480022 NGDNQ8NEJ9 315 aaKnown RBP13.48□□□□□ -0.25
CHD6-208ENST00000480022 PANK3Q9H999 370 aa13.48□□□□□ -0.25
CHD6-208ENST00000480022 POLR3AO14802 1390 aaPredicted RBP13.48□□□□□ -0.25
CHD6-208ENST00000480022 RGPD8O14715 1765 aaPredicted RBP13.47□□□□□ -0.25
CHD6-208ENST00000480022 MCM5P33992 734 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
CHD6-208ENST00000480022 FOXO3O43524 673 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 TERF2IPQ9NYB0 399 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 ZKSCAN5Q9Y2L8 839 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
CHD6-208ENST00000480022 ITSN1Q15811 1721 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 PIP4K2BP78356 416 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
CHD6-208ENST00000480022 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
CHD6-208ENST00000480022 E9PSI1 815 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
CHD6-208ENST00000480022 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
CHD6-208ENST00000480022 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
CHD6-208ENST00000480022 SNX21Q969T3 373 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.25
CHD6-208ENST00000480022 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
CHD6-208ENST00000480022 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
CHD6-208ENST00000480022 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
CHD6-208ENST00000480022 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
CHD6-208ENST00000480022 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
CHD6-208ENST00000480022 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
CHD6-208ENST00000480022 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
CHD6-208ENST00000480022 ZNF445P59923 1031 aa13.44□□□□□ -0.26
CHD6-208ENST00000480022 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
CHD6-208ENST00000480022 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
CHD6-208ENST00000480022 PSME1Q06323 249 aa13.43□□□□□ -0.26
CHD6-208ENST00000480022 USP6P35125 1406 aa13.43□□□□□ -0.26
CHD6-208ENST00000480022 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
CHD6-208ENST00000480022 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
CHD6-208ENST00000480022 CBX1P83916 185 aa13.42□□□□□ -0.26
CHD6-208ENST00000480022 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
CHD6-208ENST00000480022 NSD3Q9BZ95 1437 aa13.41□□□□□ -0.26
CHD6-208ENST00000480022 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
CHD6-208ENST00000480022 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
CHD6-208ENST00000480022 MYRIPQ8NFW9 859 aa13.41□□□□□ -0.26
CHD6-208ENST00000480022 CCDC39Q9UFE4 941 aa13.41□□□□□ -0.26
CHD6-208ENST00000480022 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
CHD6-208ENST00000480022 PXDNQ92626 1479 aa13.4□□□□□ -0.26
CHD6-208ENST00000480022 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
CHD6-208ENST00000480022 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
CHD6-208ENST00000480022 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
CHD6-208ENST00000480022 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
CHD6-208ENST00000480022 APAF1O14727 1248 aa13.4□□□□□ -0.27
CHD6-208ENST00000480022 CLEC17AQ6ZS10 378 aa13.4□□□□□ -0.27
CHD6-208ENST00000480022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.27
CHD6-208ENST00000480022 AKAP12Q02952 1782 aa13.39□□□□□ -0.27
CHD6-208ENST00000480022 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
CHD6-208ENST00000480022 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
CHD6-208ENST00000480022 MON2Q7Z3U7 1717 aa13.38□□□□□ -0.27
CHD6-208ENST00000480022 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
CHD6-208ENST00000480022 AHDC1Q5TGY3 1603 aaPredicted RBP13.38□□□□□ -0.27
CHD6-208ENST00000480022 SSFA2P28290 1259 aa13.38□□□□□ -0.27
CHD6-208ENST00000480022 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
CHD6-208ENST00000480022 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
CHD6-208ENST00000480022 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
CHD6-208ENST00000480022 BAG4O95429 457 aaKnown RBP13.37□□□□□ -0.27
CHD6-208ENST00000480022 NME9Q86XW9 330 aa13.37□□□□□ -0.27
CHD6-208ENST00000480022 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
CHD6-208ENST00000480022 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
CHD6-208ENST00000480022 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
CHD6-208ENST00000480022 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
CHD6-208ENST00000480022 FYB1O15117 783 aa13.36□□□□□ -0.27
CHD6-208ENST00000480022 ATP2B3Q16720 1220 aa13.36□□□□□ -0.27
CHD6-208ENST00000480022 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
CHD6-208ENST00000480022 SPATA31A3Q5VYP0 1347 aa13.36□□□□□ -0.27
CHD6-208ENST00000480022 HMGN5P82970 282 aaKnown RBP13.35□□□□□ -0.27
CHD6-208ENST00000480022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHD6-208ENST00000480022 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 TRPM3Q9HCF6 1732 aaPredicted RBP13.35□□□□□ -0.27
CHD6-208ENST00000480022 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
CHD6-208ENST00000480022 GGNBP2Q9H3C7 697 aa13.35□□□□□ -0.27
CHD6-208ENST00000480022 RLBP1P12271 317 aa13.34□□□□□ -0.27
CHD6-208ENST00000480022 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHD6-208ENST00000480022 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
CHD6-208ENST00000480022 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
CHD6-208ENST00000480022 K7ELQ4 463 aaPredicted RBP13.34□□□□□ -0.27
CHD6-208ENST00000480022 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
CHD6-208ENST00000480022 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
CHD6-208ENST00000480022 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
CHD6-208ENST00000480022 ZNF830Q96NB3 372 aaPredicted RBP13.33□□□□□ -0.28
CHD6-208ENST00000480022 VGLL3A8MV65 326 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms