RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
NOTCH2-203ENST00000479412 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
NOTCH2-203ENST00000479412 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
NOTCH2-203ENST00000479412 OFD1O75665 1012 aa17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
NOTCH2-203ENST00000479412 LRRC59Q96AG4 307 aaKnown RBP17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 TECPR2O15040 1411 aa17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 PNPLA6Q8IY17 1366 aa17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 EYA1Q99502 592 aa17.14■□□□□ 0.33
NOTCH2-203ENST00000479412 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
NOTCH2-203ENST00000479412 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
NOTCH2-203ENST00000479412 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
NOTCH2-203ENST00000479412 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
NOTCH2-203ENST00000479412 SIRT1Q96EB6 747 aa17.13■□□□□ 0.33
NOTCH2-203ENST00000479412 MPNDQ8N594 471 aa17.12■□□□□ 0.33
NOTCH2-203ENST00000479412 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
NOTCH2-203ENST00000479412 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
NOTCH2-203ENST00000479412 APBB1O00213 710 aa17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 TWISTNBQ3B726 338 aaPredicted RBP17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 TSC1Q92574 1164 aa17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 RGPD8O14715 1765 aaPredicted RBP17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 NGEFQ8N5V2 710 aa17.11■□□□□ 0.33
NOTCH2-203ENST00000479412 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
NOTCH2-203ENST00000479412 IGSF3O75054 1194 aa17.1■□□□□ 0.33
NOTCH2-203ENST00000479412 CBX1P83916 185 aa17.1■□□□□ 0.33
NOTCH2-203ENST00000479412 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
NOTCH2-203ENST00000479412 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
NOTCH2-203ENST00000479412 GBP4Q96PP9 640 aa17.08■□□□□ 0.33
NOTCH2-203ENST00000479412 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
NOTCH2-203ENST00000479412 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.32
NOTCH2-203ENST00000479412 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
NOTCH2-203ENST00000479412 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
NOTCH2-203ENST00000479412 SLC4A10Q6U841 1118 aa17.07■□□□□ 0.32
NOTCH2-203ENST00000479412 MED14O60244 1454 aa17.07■□□□□ 0.32
NOTCH2-203ENST00000479412 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
NOTCH2-203ENST00000479412 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 HOXC9P31274 260 aa17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 GNAI1P63096 354 aa17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 VAMP4O75379 141 aa17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 SMAP1Q8IYB5 467 aaPredicted RBP17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
NOTCH2-203ENST00000479412 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
NOTCH2-203ENST00000479412 SLIT1O75093 1534 aa17.05■□□□□ 0.32
NOTCH2-203ENST00000479412 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
NOTCH2-203ENST00000479412 F6X3S4 739 aa17.04■□□□□ 0.32
NOTCH2-203ENST00000479412 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
NOTCH2-203ENST00000479412 OVOS2A0A0J9YW53 1432 aa17.03■□□□□ 0.32
NOTCH2-203ENST00000479412 OVOS2Q6IE36 1432 aa17.03■□□□□ 0.32
NOTCH2-203ENST00000479412 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
NOTCH2-203ENST00000479412 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
NOTCH2-203ENST00000479412 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
NOTCH2-203ENST00000479412 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
NOTCH2-203ENST00000479412 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
NOTCH2-203ENST00000479412 CAVIN1Q6NZI2 390 aaKnown RBP17.02■□□□□ 0.32
NOTCH2-203ENST00000479412 ATF3P18847 181 aa17.02■□□□□ 0.31
NOTCH2-203ENST00000479412 CDK12Q9NYV4 1490 aaPredicted RBP17.02■□□□□ 0.31
NOTCH2-203ENST00000479412 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 SSFA2P28290 1259 aa17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 FLT4P35916 1363 aa17.01■□□□□ 0.31
NOTCH2-203ENST00000479412 GOLGA6L22H0YM25 854 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 IFT57Q9NWB7 429 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
NOTCH2-203ENST00000479412 ITSN1Q15811 1721 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 SLC4A2P04920 1241 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 MPRIPQ6WCQ1 1025 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 ANXA1P04083 346 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 RNF214Q8ND24 703 aa17■□□□□ 0.31
NOTCH2-203ENST00000479412 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 SPDYE4A6NLX3 237 aa16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 GCP02774 474 aa16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 GTF2E1P29083 439 aaPredicted RBP16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
NOTCH2-203ENST00000479412 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
NOTCH2-203ENST00000479412 G2E3Q7L622 706 aa16.98■□□□□ 0.31
NOTCH2-203ENST00000479412 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
NOTCH2-203ENST00000479412 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
NOTCH2-203ENST00000479412 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms