RNA–Protein interactions for RNA: ENST00000479376.1

IDH3B-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 2

Gene IDH3B, Length 436 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-208ENST00000479376 USP35Q9P2H5 1018 aa15.04■□□□□ -0
IDH3B-208ENST00000479376 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
IDH3B-208ENST00000479376 PKD1L3Q7Z443 1732 aa15.03■□□□□ -0
IDH3B-208ENST00000479376 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
IDH3B-208ENST00000479376 PARP4Q9UKK3 1724 aaKnown RBP15.03■□□□□ -0
IDH3B-208ENST00000479376 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
IDH3B-208ENST00000479376 RIPK4P57078 832 aa15.03■□□□□ -0
IDH3B-208ENST00000479376 USP21Q9UK80 565 aa15.03■□□□□ -0
IDH3B-208ENST00000479376 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
IDH3B-208ENST00000479376 AFF2P51816 1311 aa15.02■□□□□ -0
IDH3B-208ENST00000479376 SPATA31A1Q5TZJ5 1347 aa15.02■□□□□ -0
IDH3B-208ENST00000479376 ZNF521Q96K83 1311 aa15.02■□□□□ -0
IDH3B-208ENST00000479376 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
IDH3B-208ENST00000479376 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
IDH3B-208ENST00000479376 NEFMP07197 916 aa15.01□□□□□ -0.01
IDH3B-208ENST00000479376 TATP17735 454 aaPredicted RBP15.01□□□□□ -0.01
IDH3B-208ENST00000479376 RAPGEF4Q8WZA2 1011 aa15.01□□□□□ -0.01
IDH3B-208ENST00000479376 DISP2A7MBM2 1401 aa15□□□□□ -0.01
IDH3B-208ENST00000479376 VPS72Q15906 364 aa15□□□□□ -0.01
IDH3B-208ENST00000479376 CCDC27Q2M243 656 aa15□□□□□ -0.01
IDH3B-208ENST00000479376 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
IDH3B-208ENST00000479376 PLEKHO1Q53GL0 409 aaPredicted RBP15□□□□□ -0.01
IDH3B-208ENST00000479376 WWC1Q8IX03 1113 aa15□□□□□ -0.01
IDH3B-208ENST00000479376 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
IDH3B-208ENST00000479376 IL2RBP14784 551 aa14.99□□□□□ -0.01
IDH3B-208ENST00000479376 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
IDH3B-208ENST00000479376 DCTN1Q14203 1278 aa14.98□□□□□ -0.01
IDH3B-208ENST00000479376 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
IDH3B-208ENST00000479376 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
IDH3B-208ENST00000479376 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
IDH3B-208ENST00000479376 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
IDH3B-208ENST00000479376 CCDC9Q9Y3X0 531 aaKnown RBP14.98□□□□□ -0.01
IDH3B-208ENST00000479376 GLI3P10071 1580 aa14.98□□□□□ -0.01
IDH3B-208ENST00000479376 AMOTQ4VCS5 1084 aa14.97□□□□□ -0.01
IDH3B-208ENST00000479376 ZNF530Q6P9A1 599 aaPredicted RBP14.97□□□□□ -0.01
IDH3B-208ENST00000479376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.011e-12■□□□□ 10.1
IDH3B-208ENST00000479376 ATRNO75882 1429 aa14.97□□□□□ -0.01
IDH3B-208ENST00000479376 CYP27B1O15528 508 aa14.96□□□□□ -0.01
IDH3B-208ENST00000479376 MCM10Q7L590 875 aa14.96□□□□□ -0.01
IDH3B-208ENST00000479376 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
IDH3B-208ENST00000479376 THRAP3Q9Y2W1 955 aaKnown RBP14.96□□□□□ -0.01
IDH3B-208ENST00000479376 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.02
IDH3B-208ENST00000479376 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 ZCRB1Q8TBF4 217 aaKnown RBP14.95□□□□□ -0.02
IDH3B-208ENST00000479376 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 ADAMTS7Q9UKP4 1686 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 LRRC37A3O60309 1634 aa14.95□□□□□ -0.02
IDH3B-208ENST00000479376 PHKG2P15735 406 aa14.94□□□□□ -0.02
IDH3B-208ENST00000479376 AKAP4Q5JQC9 854 aa14.94□□□□□ -0.02
IDH3B-208ENST00000479376 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
IDH3B-208ENST00000479376 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
IDH3B-208ENST00000479376 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
IDH3B-208ENST00000479376 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
IDH3B-208ENST00000479376 SLFN5Q08AF3 891 aa14.93□□□□□ -0.02
IDH3B-208ENST00000479376 FAM98CQ17RN3 349 aaKnown RBP14.93□□□□□ -0.02
IDH3B-208ENST00000479376 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
IDH3B-208ENST00000479376 CCDC125Q86Z20 511 aa14.93□□□□□ -0.02
IDH3B-208ENST00000479376 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
IDH3B-208ENST00000479376 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
IDH3B-208ENST00000479376 HTATSF1O43719 755 aaKnown RBP14.92□□□□□ -0.02
IDH3B-208ENST00000479376 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
IDH3B-208ENST00000479376 DDX54Q8TDD1 881 aaKnown RBP14.92□□□□□ -0.02
IDH3B-208ENST00000479376 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
IDH3B-208ENST00000479376 SIPA1L3O60292 1781 aaPredicted RBP14.92□□□□□ -0.02
IDH3B-208ENST00000479376 KDM6AO15550 1401 aaPredicted RBP14.92□□□□□ -0.02
IDH3B-208ENST00000479376 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
IDH3B-208ENST00000479376 PDE3BQ13370 1112 aa14.91□□□□□ -0.02
IDH3B-208ENST00000479376 C1orf141Q5JVX7 400 aa14.91□□□□□ -0.02
IDH3B-208ENST00000479376 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
IDH3B-208ENST00000479376 TOGARAM1Q9Y4F4 1720 aa14.91□□□□□ -0.02
IDH3B-208ENST00000479376 RGS12O14924 1447 aa14.91□□□□□ -0.02
IDH3B-208ENST00000479376 EXOC5O00471 708 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 RNMTO43148 476 aaKnown RBP14.9□□□□□ -0.02
IDH3B-208ENST00000479376 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
IDH3B-208ENST00000479376 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
IDH3B-208ENST00000479376 LRP5O75197 1615 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 IL16Q14005 1332 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
IDH3B-208ENST00000479376 CEMIPQ8WUJ3 1361 aa14.89□□□□□ -0.03
IDH3B-208ENST00000479376 ONECUT3O60422 494 aaPredicted RBP14.89□□□□□ -0.03
IDH3B-208ENST00000479376 ZNF853P0CG23 659 aa14.89□□□□□ -0.03
IDH3B-208ENST00000479376 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
IDH3B-208ENST00000479376 DUSP27Q5VZP5 1158 aa14.89□□□□□ -0.03
IDH3B-208ENST00000479376 ITGB4P16144 1822 aa14.88□□□□□ -0.03
IDH3B-208ENST00000479376 BRWD3Q6RI45 1802 aa14.88□□□□□ -0.03
IDH3B-208ENST00000479376 E9PSI1 815 aa14.88□□□□□ -0.03
IDH3B-208ENST00000479376 DDB1Q16531 1140 aa14.88□□□□□ -0.03
IDH3B-208ENST00000479376 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
IDH3B-208ENST00000479376 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
IDH3B-208ENST00000479376 MARCH10Q8NA82 808 aaPredicted RBP14.87□□□□□ -0.03
IDH3B-208ENST00000479376 MIS18AQ9NYP9 233 aa14.87□□□□□ -0.03
IDH3B-208ENST00000479376 KDM3BQ7LBC6 1761 aa14.86□□□□□ -0.03
IDH3B-208ENST00000479376 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
IDH3B-208ENST00000479376 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms