RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ZMIZ1Q9ULJ6 1067 aa9.03□□□□□ -0.96
RFC4-212ENST00000479307 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
RFC4-212ENST00000479307 GFRA3O60609 400 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 CLDN10P78369 228 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 ANKMY2Q8IV38 441 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 SIX5Q8N196 739 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
RFC4-212ENST00000479307 RBM19Q9Y4C8 960 aaKnown RBP9.02□□□□□ -0.97
RFC4-212ENST00000479307 PATL2C9JE40 543 aaKnown RBP9.01□□□□□ -0.97
RFC4-212ENST00000479307 CC2D2BQ6DHV5 1058 aa9.01□□□□□ -0.97
RFC4-212ENST00000479307 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
RFC4-212ENST00000479307 BRD1O95696 1058 aa9□□□□□ -0.97
RFC4-212ENST00000479307 TMEM164Q5U3C3 297 aa9□□□□□ -0.97
RFC4-212ENST00000479307 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
RFC4-212ENST00000479307 STK32AQ8WU08 396 aa9□□□□□ -0.97
RFC4-212ENST00000479307 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
RFC4-212ENST00000479307 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
RFC4-212ENST00000479307 ZBTB7CA1YPR0 619 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 LCE2BO14633 110 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
RFC4-212ENST00000479307 DPYDQ12882 1025 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 PGPEP1Q9NXJ5 209 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 PKD2L1Q9P0L9 805 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
RFC4-212ENST00000479307 MYT1Q01538 1121 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 PSME1Q06323 249 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 LAPTM4AQ15012 233 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 PPP1R26Q5T8A7 1209 aaPredicted RBP8.98□□□□□ -0.97
RFC4-212ENST00000479307 CCDC102BQ68D86 513 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 ZNF784Q8NCA9 323 aaPredicted RBP8.98□□□□□ -0.97
RFC4-212ENST00000479307 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
RFC4-212ENST00000479307 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
RFC4-212ENST00000479307 DKK1O94907 266 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 ALDH1A1P00352 501 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 SCTRP47872 440 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 SEC13P55735 322 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 FOXC1Q12948 553 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 TPCN2Q8NHX9 752 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 KIAA1024Q9UPX6 916 aa8.97□□□□□ -0.97
RFC4-212ENST00000479307 GDF9O60383 454 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 NR3C2P08235 984 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 NNTQ13423 1086 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 CYP2U1Q7Z449 544 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 TMPRSS4Q9NRS4 437 aa8.96□□□□□ -0.98
RFC4-212ENST00000479307 M0R2N6 131 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
RFC4-212ENST00000479307 LILRA1O75019 489 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 KCNA1Q09470 495 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
RFC4-212ENST00000479307 AEBP1Q8IUX7 1158 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
RFC4-212ENST00000479307 OSBPL3Q9H4L5 887 aa8.95□□□□□ -0.98
RFC4-212ENST00000479307 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
RFC4-212ENST00000479307 PRR20EP86478 221 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 PRR20CP86479 221 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 PRR20DP86480 221 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 PRR20BP86481 221 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 PRR20AP86496 221 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 CYP4X1Q8N118 509 aa8.94□□□□□ -0.98
RFC4-212ENST00000479307 CARNS1A5YM72 827 aa8.93□□□□□ -0.98
RFC4-212ENST00000479307 GNRH1P01148 92 aa8.92□□□□□ -0.98
RFC4-212ENST00000479307 TOR4AQ9NXH8 423 aa8.92□□□□□ -0.98
RFC4-212ENST00000479307 ESCO1Q5FWF5 840 aa8.91□□□□□ -0.98
RFC4-212ENST00000479307 TNFRSF10AO00220 468 aa8.9□□□□□ -0.98
RFC4-212ENST00000479307 BACH1O14867 736 aa8.9□□□□□ -0.98
RFC4-212ENST00000479307 ZNF358Q9NW07 568 aa8.9□□□□□ -0.98
RFC4-212ENST00000479307 UNC13AQ9UPW8 1703 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 SFI1A8K8P3 1242 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 TMEM229AB2RXF0 380 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 J3QL48 77 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 ADH1AP07327 375 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 SSFA2P28290 1259 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 SCNN1DP51172 638 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 GDF10P55107 478 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
RFC4-212ENST00000479307 KLF16Q9BXK1 252 aaPredicted RBP8.89□□□□□ -0.99
RFC4-212ENST00000479307 INHAP05111 366 aa8.88□□□□□ -0.99
RFC4-212ENST00000479307 ADD1P35611 737 aaKnown RBP8.88□□□□□ -0.99
RFC4-212ENST00000479307 Q6ZVU0 165 aa8.88□□□□□ -0.99
RFC4-212ENST00000479307 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
RFC4-212ENST00000479307 C1orf216Q8TAB5 229 aa8.88□□□□□ -0.99
RFC4-212ENST00000479307 NRG2O14511 850 aaPredicted RBP8.87□□□□□ -0.99
RFC4-212ENST00000479307 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
RFC4-212ENST00000479307 SMPD1P17405 629 aa8.87□□□□□ -0.99
RFC4-212ENST00000479307 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
RFC4-212ENST00000479307 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
RFC4-212ENST00000479307 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
RFC4-212ENST00000479307 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
RFC4-212ENST00000479307 PODXL2Q9NZ53 605 aa8.87□□□□□ -0.99
RFC4-212ENST00000479307 GNEQ9Y223 722 aaKnown RBP8.87□□□□□ -0.99
RFC4-212ENST00000479307 TIMP2P16035 220 aa8.86□□□□□ -0.99
RFC4-212ENST00000479307 TSEN2Q8NCE0 465 aaKnown RBP8.86□□□□□ -0.99
RFC4-212ENST00000479307 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
RFC4-212ENST00000479307 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms