RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 DAXXQ9UER7 740 aaPredicted RBP34.99■■■■□ 3.19
CHKB-208ENST00000479003 ARHGEF10O15013 1369 aa34.98■■■■□ 3.19
CHKB-208ENST00000479003 IP6K1Q92551 441 aa34.97■■■■□ 3.19
CHKB-208ENST00000479003 PDZRN3Q9UPQ7 1066 aa34.97■■■■□ 3.19
CHKB-208ENST00000479003 SPATA31A3Q5VYP0 1347 aa34.97■■■■□ 3.19
CHKB-208ENST00000479003 TRIM27P14373 513 aa34.97■■■■□ 3.19
CHKB-208ENST00000479003 EYA1Q99502 592 aa34.97■■■■□ 3.19
CHKB-208ENST00000479003 ARHGEF25Q86VW2 580 aa34.96■■■■□ 3.19
CHKB-208ENST00000479003 IGSF1Q8N6C5 1336 aa34.95■■■■□ 3.19
CHKB-208ENST00000479003 SLC4A3P48751 1232 aa34.95■■■■□ 3.19
CHKB-208ENST00000479003 LTV1Q96GA3 475 aaPredicted RBP34.95■■■■□ 3.19
CHKB-208ENST00000479003 NFE2L2Q16236 605 aa34.94■■■■□ 3.18
CHKB-208ENST00000479003 ATF7IPQ6VMQ6 1270 aa34.94■■■■□ 3.18
CHKB-208ENST00000479003 DDX19BQ9UMR2 479 aa34.92■■■■□ 3.18
CHKB-208ENST00000479003 SOS2Q07890 1332 aaPredicted RBP34.92■■■■□ 3.18
CHKB-208ENST00000479003 KDRP35968 1356 aa34.92■■■■□ 3.18
CHKB-208ENST00000479003 CABLES1Q8TDN4 633 aa34.9■■■■□ 3.18
CHKB-208ENST00000479003 NOB1Q9ULX3 412 aaKnown RBP34.9■■■■□ 3.18
CHKB-208ENST00000479003 CRYBG1Q9Y4K1 1723 aa34.89■■■■□ 3.18
CHKB-208ENST00000479003 DLG5Q8TDM6 1919 aa34.89■■■■□ 3.18
CHKB-208ENST00000479003 ALDH1L2Q3SY69 923 aa34.89■■■■□ 3.18
CHKB-208ENST00000479003 KIF16BQ96L93 1317 aa34.89■■■■□ 3.18
CHKB-208ENST00000479003 SEC24BO95487 1268 aa34.88■■■■□ 3.17
CHKB-208ENST00000479003 ZC3H6P61129 1189 aaKnown RBP34.88■■■■□ 3.17
CHKB-208ENST00000479003 NHSL1Q5SYE7 1610 aa34.87■■■■□ 3.17
CHKB-208ENST00000479003 HDAC1Q13547 482 aaPredicted RBP34.86■■■■□ 3.17
CHKB-208ENST00000479003 IPO8O15397 1037 aaKnown RBP34.85■■■■□ 3.17
CHKB-208ENST00000479003 ITPRIPQ8IWB1 547 aa34.85■■■■□ 3.17
CHKB-208ENST00000479003 ZNF428Q96B54 188 aa34.84■■■■□ 3.17
CHKB-208ENST00000479003 AXIN2Q9Y2T1 843 aa34.84■■■■□ 3.17
CHKB-208ENST00000479003 BRPF1P55201 1214 aaPredicted RBP34.82■■■■□ 3.16
CHKB-208ENST00000479003 USHBP1Q8N6Y0 703 aa34.82■■■■□ 3.16
CHKB-208ENST00000479003 TMEM57Q8N5G2 664 aa34.81■■■■□ 3.16
CHKB-208ENST00000479003 THUMPD2Q9BTF0 503 aaKnown RBP34.81■■■■□ 3.16
CHKB-208ENST00000479003 RGPD2P0DJD1 1756 aa34.81■■■■□ 3.16
CHKB-208ENST00000479003 CALD1Q05682 793 aaKnown RBP34.81■■■■□ 3.16
CHKB-208ENST00000479003 RGPD5Q99666 1765 aa34.8■■■■□ 3.16
CHKB-208ENST00000479003 NBPF6Q5VWK0 638 aa34.79■■■■□ 3.16
CHKB-208ENST00000479003 NBPF4Q96M43 638 aa34.79■■■■□ 3.16
CHKB-208ENST00000479003 ROBO1Q9Y6N7 1651 aa34.79■■■■□ 3.16
CHKB-208ENST00000479003 FAM83GA6ND36 823 aa34.78■■■■□ 3.16
CHKB-208ENST00000479003 NFKBIBQ15653 356 aa34.78■■■■□ 3.16
CHKB-208ENST00000479003 LRRC59Q96AG4 307 aaKnown RBP34.78■■■■□ 3.16
CHKB-208ENST00000479003 ZBTB40Q9NUA8 1239 aa34.78■■■■□ 3.16
CHKB-208ENST00000479003 ANKRD24Q8TF21 1146 aa34.76■■■■□ 3.15
CHKB-208ENST00000479003 MTHFSDQ2M296 383 aaKnown RBP34.75■■■■□ 3.15
CHKB-208ENST00000479003 IFT57Q9NWB7 429 aa34.75■■■■□ 3.15
CHKB-208ENST00000479003 LMOD3Q0VAK6 560 aa34.74■■■■□ 3.15
CHKB-208ENST00000479003 SMC5Q8IY18 1101 aa34.74■■■■□ 3.15
CHKB-208ENST00000479003 COL18A1P39060 1754 aa34.74■■■■□ 3.15
CHKB-208ENST00000479003 DCTN1Q14203 1278 aa34.73■■■■□ 3.15
CHKB-208ENST00000479003 GNAI1P63096 354 aa34.73■■■■□ 3.15
CHKB-208ENST00000479003 KIAA0232Q92628 1395 aa34.72■■■■□ 3.15
CHKB-208ENST00000479003 ZNF853P0CG23 659 aa34.72■■■■□ 3.15
CHKB-208ENST00000479003 UPF2Q9HAU5 1272 aaKnown RBP34.72■■■■□ 3.15
CHKB-208ENST00000479003 ERBB3P21860 1342 aa34.71■■■■□ 3.15
CHKB-208ENST00000479003 VAMP4O75379 141 aa34.71■■■■□ 3.15
CHKB-208ENST00000479003 CHRNA2Q15822 529 aa34.71■■■■□ 3.15
CHKB-208ENST00000479003 TBC1D32Q96NH3 1257 aa34.7■■■■□ 3.15
CHKB-208ENST00000479003 ABCA3Q99758 1704 aa34.7■■■■□ 3.15
CHKB-208ENST00000479003 CPDO75976 1380 aa34.69■■■■□ 3.14
CHKB-208ENST00000479003 BECN1Q14457 450 aa34.69■■■■□ 3.14
CHKB-208ENST00000479003 MRPL50Q8N5N7 158 aaKnown RBP34.67■■■■□ 3.14
CHKB-208ENST00000479003 ARHGAP45Q92619 1136 aa34.67■■■■□ 3.14
CHKB-208ENST00000479003 CAMTA1Q9Y6Y1 1673 aa34.67■■■■□ 3.14
CHKB-208ENST00000479003 NCAPD2Q15021 1401 aa34.67■■■■□ 3.14
CHKB-208ENST00000479003 MCM10Q7L590 875 aa34.66■■■■□ 3.14
CHKB-208ENST00000479003 GAS2L2Q8NHY3 880 aa34.65■■■■□ 3.14
CHKB-208ENST00000479003 MBIPQ9NS73 344 aa34.65■■■■□ 3.14
CHKB-208ENST00000479003 AHDC1Q5TGY3 1603 aaPredicted RBP34.65■■■■□ 3.14
CHKB-208ENST00000479003 ABCC6O95255 1503 aa34.65■■■■□ 3.14
CHKB-208ENST00000479003 TSPYL6Q8N831 410 aa34.63■■■■□ 3.13
CHKB-208ENST00000479003 CFAP44Q96MT7 982 aa34.63■■■■□ 3.13
CHKB-208ENST00000479003 LMO7Q8WWI1 1683 aa34.62■■■■□ 3.13
CHKB-208ENST00000479003 HAP1P54257 671 aaPredicted RBP34.61■■■■□ 3.13
CHKB-208ENST00000479003 CHMP4BQ9H444 224 aaKnown RBP34.61■■■■□ 3.13
CHKB-208ENST00000479003 AEBP2Q6ZN18 517 aaPredicted RBP34.6■■■■□ 3.13
CHKB-208ENST00000479003 PRDM11Q9NQV5 511 aa34.59■■■■□ 3.13
CHKB-208ENST00000479003 NUCB1Q02818 461 aa34.58■■■■□ 3.13
CHKB-208ENST00000479003 ZBTB7BO15156 539 aaPredicted RBP34.57■■■■□ 3.12
CHKB-208ENST00000479003 TWISTNBQ3B726 338 aaPredicted RBP34.56■■■■□ 3.12
CHKB-208ENST00000479003 RTF1Q92541 710 aaKnown RBP34.56■■■■□ 3.12
CHKB-208ENST00000479003 NLRP2Q9NX02 1062 aa34.55■■■■□ 3.12
CHKB-208ENST00000479003 CRB1P82279 1406 aa34.55■■■■□ 3.12
CHKB-208ENST00000479003 ABCC4O15439 1325 aa34.55■■■■□ 3.12
CHKB-208ENST00000479003 MAP3K5Q99683 1374 aa34.54■■■■□ 3.12
CHKB-208ENST00000479003 FAM208AQ9UK61 1670 aaKnown RBP34.54■■■■□ 3.12
CHKB-208ENST00000479003 GNAT3A8MTJ3 354 aa34.54■■■■□ 3.12
CHKB-208ENST00000479003 CSB-PGBD3P0DP91 1061 aa34.54■■■■□ 3.12
CHKB-208ENST00000479003 C8orf58Q8NAV2 365 aa34.52■■■■□ 3.12
CHKB-208ENST00000479003 FRAT2O75474 233 aaPredicted RBP34.51■■■■□ 3.12
CHKB-208ENST00000479003 PIP4K2BP78356 416 aa34.51■■■■□ 3.12
CHKB-208ENST00000479003 LRRC37A3O60309 1634 aa34.51■■■■□ 3.11
CHKB-208ENST00000479003 ELL2O00472 640 aaPredicted RBP34.51■■■■□ 3.11
CHKB-208ENST00000479003 TOM1O60784 492 aa34.51■■■■□ 3.11
CHKB-208ENST00000479003 GSE1Q14687 1217 aa34.51■■■■□ 3.11
CHKB-208ENST00000479003 HTATSF1O43719 755 aaKnown RBP34.5■■■■□ 3.11
CHKB-208ENST00000479003 PHLPP1O60346 1717 aa34.49■■■■□ 3.11
CHKB-208ENST00000479003 CHD1LQ86WJ1 897 aa34.49■■■■□ 3.11
CHKB-208ENST00000479003 COL16A1Q07092 1604 aaPredicted RBP34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms