RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CCDC173Q0VFZ6 552 aa17.46■□□□□ 0.39
CCDC78-210ENST00000478979 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
CCDC78-210ENST00000478979 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
CCDC78-210ENST00000478979 OFD1O75665 1012 aa17.46■□□□□ 0.38
CCDC78-210ENST00000478979 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-210ENST00000478979 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
CCDC78-210ENST00000478979 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
CCDC78-210ENST00000478979 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
CCDC78-210ENST00000478979 F6X3S4 739 aa17.44■□□□□ 0.38
CCDC78-210ENST00000478979 AMPHP49418 695 aa17.44■□□□□ 0.38
CCDC78-210ENST00000478979 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
CCDC78-210ENST00000478979 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-210ENST00000478979 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-210ENST00000478979 OTUD7AQ8TE49 926 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-210ENST00000478979 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
CCDC78-210ENST00000478979 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.43■□□□□ 0.38
CCDC78-210ENST00000478979 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
CCDC78-210ENST00000478979 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
CCDC78-210ENST00000478979 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 ABCC4O15439 1325 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
CCDC78-210ENST00000478979 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
CCDC78-210ENST00000478979 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
CCDC78-210ENST00000478979 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
CCDC78-210ENST00000478979 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
CCDC78-210ENST00000478979 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
CCDC78-210ENST00000478979 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
CCDC78-210ENST00000478979 MEIS3Q99687 375 aa17.41■□□□□ 0.38
CCDC78-210ENST00000478979 G2E3Q7L622 706 aa17.4■□□□□ 0.38
CCDC78-210ENST00000478979 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
CCDC78-210ENST00000478979 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
CCDC78-210ENST00000478979 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
CCDC78-210ENST00000478979 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
CCDC78-210ENST00000478979 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
CCDC78-210ENST00000478979 NLRP6P59044 892 aa17.4■□□□□ 0.38
CCDC78-210ENST00000478979 ARHGAP45Q92619 1136 aa17.4■□□□□ 0.38
CCDC78-210ENST00000478979 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.38
CCDC78-210ENST00000478979 ANP32BQ92688 251 aaKnown RBP17.39■□□□□ 0.38
CCDC78-210ENST00000478979 R3HCC1Q9Y3T6 440 aaKnown RBP17.39■□□□□ 0.38
CCDC78-210ENST00000478979 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
CCDC78-210ENST00000478979 SNX21Q969T3 373 aa17.39■□□□□ 0.37
CCDC78-210ENST00000478979 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
CCDC78-210ENST00000478979 TERF1P54274 439 aa17.38■□□□□ 0.37
CCDC78-210ENST00000478979 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
CCDC78-210ENST00000478979 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
CCDC78-210ENST00000478979 MSH6P52701 1360 aa17.37■□□□□ 0.37
CCDC78-210ENST00000478979 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
CCDC78-210ENST00000478979 PTMSP20962 102 aa17.37■□□□□ 0.37
CCDC78-210ENST00000478979 REREQ9P2R6 1566 aa17.37■□□□□ 0.37
CCDC78-210ENST00000478979 RBM25P49756 843 aaKnown RBP17.37■□□□□ 0.37
CCDC78-210ENST00000478979 GSPT1P15170 499 aaKnown RBP17.36■□□□□ 0.37
CCDC78-210ENST00000478979 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
CCDC78-210ENST00000478979 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 USP6P35125 1406 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
CCDC78-210ENST00000478979 CHL1O00533 1208 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 MON2Q7Z3U7 1717 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 EYA1Q99502 592 aa17.36■□□□□ 0.37
CCDC78-210ENST00000478979 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
CCDC78-210ENST00000478979 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
CCDC78-210ENST00000478979 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
CCDC78-210ENST00000478979 C3P01024 1663 aa17.35■□□□□ 0.37
CCDC78-210ENST00000478979 ARID3AQ99856 593 aa17.34■□□□□ 0.37
CCDC78-210ENST00000478979 PLEKHG3A1L390 1219 aa17.34■□□□□ 0.37
CCDC78-210ENST00000478979 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
CCDC78-210ENST00000478979 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.37
CCDC78-210ENST00000478979 TECPR2O15040 1411 aa17.33■□□□□ 0.37
CCDC78-210ENST00000478979 SSFA2P28290 1259 aa17.33■□□□□ 0.37
CCDC78-210ENST00000478979 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.37
CCDC78-210ENST00000478979 KCNA6P17658 529 aa17.33■□□□□ 0.36
CCDC78-210ENST00000478979 ABTB2Q8N961 1025 aa17.33■□□□□ 0.36
CCDC78-210ENST00000478979 UQCRHLA0A096LP55 91 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 UQCRHP07919 91 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 CEP85Q6P2H3 762 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 SIRT1Q96EB6 747 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 GOLGA6L22H0YM25 854 aa17.32■□□□□ 0.36
CCDC78-210ENST00000478979 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-210ENST00000478979 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
CCDC78-210ENST00000478979 A0A0U1RQG5 324 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-210ENST00000478979 CDC45O75419 566 aa17.31■□□□□ 0.36
CCDC78-210ENST00000478979 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
CCDC78-210ENST00000478979 KIF2CQ99661 725 aa17.31■□□□□ 0.36
CCDC78-210ENST00000478979 FKBP5Q13451 457 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-210ENST00000478979 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-210ENST00000478979 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-210ENST00000478979 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CCDC78-210ENST00000478979 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
CCDC78-210ENST00000478979 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
CCDC78-210ENST00000478979 KNDC1Q76NI1 1749 aa17.3■□□□□ 0.36
CCDC78-210ENST00000478979 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-210ENST00000478979 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms