RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 J3QL48 77 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
VRK2-209ENST00000478687 TSPY4P0CV99 314 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 TSPY10P0CW01 314 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 ATP6V1AP38606 617 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
VRK2-209ENST00000478687 ZC3H13Q5T200 1668 aaKnown RBP8.65□□□□□ -1.02
VRK2-209ENST00000478687 ERVK-7P63135 1459 aa8.65□□□□□ -1.02
VRK2-209ENST00000478687 LTKP29376 864 aa8.64□□□□□ -1.03
VRK2-209ENST00000478687 TRIM32Q13049 653 aa8.64□□□□□ -1.03
VRK2-209ENST00000478687 MRGPRX2Q96LB1 330 aa8.64□□□□□ -1.03
VRK2-209ENST00000478687 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
VRK2-209ENST00000478687 ARHGEF5Q12774 1597 aa8.64□□□□□ -1.03
VRK2-209ENST00000478687 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
VRK2-209ENST00000478687 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
VRK2-209ENST00000478687 RNF19BQ6ZMZ0 732 aa8.63□□□□□ -1.03
VRK2-209ENST00000478687 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
VRK2-209ENST00000478687 TXNDC2Q86VQ3 553 aa8.63□□□□□ -1.03
VRK2-209ENST00000478687 HPS1Q92902 700 aa8.63□□□□□ -1.03
VRK2-209ENST00000478687 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
VRK2-209ENST00000478687 MROH1Q8NDA8 1641 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 XIRP1Q702N8 1843 aaKnown RBP8.62□□□□□ -1.03
VRK2-209ENST00000478687 GCGRP47871 477 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 MMP16P51512 607 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 SRCAPQ6ZRS2 3230 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 CEP152O94986 1710 aa8.62□□□□□ -1.03
VRK2-209ENST00000478687 CFAP65Q6ZU64 1925 aaKnown RBP8.61□□□□□ -1.03
VRK2-209ENST00000478687 CFAP44Q96MT7 982 aa8.61□□□□□ -1.03
VRK2-209ENST00000478687 EIF2AK4Q9P2K8 1649 aaKnown RBP8.61□□□□□ -1.03
VRK2-209ENST00000478687 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
VRK2-209ENST00000478687 SLIT1O75093 1534 aa8.6□□□□□ -1.03
VRK2-209ENST00000478687 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
VRK2-209ENST00000478687 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
VRK2-209ENST00000478687 HIC1Q14526 733 aa8.6□□□□□ -1.03
VRK2-209ENST00000478687 EID1Q9Y6B2 187 aa8.6□□□□□ -1.03
VRK2-209ENST00000478687 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
VRK2-209ENST00000478687 FAM135BQ49AJ0 1406 aa8.59□□□□□ -1.03
VRK2-209ENST00000478687 TMEM94Q12767 1356 aa8.59□□□□□ -1.03
VRK2-209ENST00000478687 PIK3C2BO00750 1634 aa8.58□□□□□ -1.04
VRK2-209ENST00000478687 GPR37O15354 613 aa8.58□□□□□ -1.04
VRK2-209ENST00000478687 GMPRP36959 345 aa8.58□□□□□ -1.04
VRK2-209ENST00000478687 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
VRK2-209ENST00000478687 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
VRK2-209ENST00000478687 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
VRK2-209ENST00000478687 LRRC9Q6ZRR7 1453 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 FECHP22830 423 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 SKOR1P84550 965 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 REPIN1Q9BWE0 567 aaKnown RBP8.57□□□□□ -1.04
VRK2-209ENST00000478687 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
VRK2-209ENST00000478687 DUOX2Q9NRD8 1548 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 TMEM2Q9UHN6 1383 aa8.57□□□□□ -1.04
VRK2-209ENST00000478687 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
VRK2-209ENST00000478687 ARHGAP31Q2M1Z3 1444 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
VRK2-209ENST00000478687 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 FAM181BA6NEQ2 426 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 DDX11L8A8MPP1 907 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 KANK4Q5T7N3 995 aaPredicted RBP8.56□□□□□ -1.04
VRK2-209ENST00000478687 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 KIF15Q9NS87 1388 aa8.56□□□□□ -1.04
VRK2-209ENST00000478687 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
VRK2-209ENST00000478687 KCNA6P17658 529 aa8.55□□□□□ -1.04
VRK2-209ENST00000478687 PROSER2Q86WR7 435 aaPredicted RBP8.55□□□□□ -1.04
VRK2-209ENST00000478687 MYOM3Q5VTT5 1437 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 IDI1Q13907 227 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 BCANQ96GW7 911 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
VRK2-209ENST00000478687 TET3O43151 1660 aa8.53□□□□□ -1.04
VRK2-209ENST00000478687 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
VRK2-209ENST00000478687 TRIM46Q7Z4K8 759 aa8.53□□□□□ -1.04
VRK2-209ENST00000478687 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
VRK2-209ENST00000478687 VPS8Q8N3P4 1428 aa8.53□□□□□ -1.04
VRK2-209ENST00000478687 PHLPP1O60346 1717 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 MSH6P52701 1360 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 H3BM21 787 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 SEMA3EO15041 775 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 WNT7BP56706 349 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 ABCC5O15440 1437 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 CROCC2H7BZ55 1655 aa8.52□□□□□ -1.05
VRK2-209ENST00000478687 KANK1Q14678 1352 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 JCADQ9P266 1359 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 KDM5AP29375 1690 aaKnown RBP8.51□□□□□ -1.05
VRK2-209ENST00000478687 GNPATO15228 680 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 IRF7Q92985 503 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 RTN4Q9NQC3 1192 aaKnown RBP8.51□□□□□ -1.05
VRK2-209ENST00000478687 NWD1Q149M9 1564 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
VRK2-209ENST00000478687 NKTRP30414 1462 aaKnown RBP8.51□□□□□ -1.05
VRK2-209ENST00000478687 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
VRK2-209ENST00000478687 SIAH2O43255 324 aa8.5□□□□□ -1.05
VRK2-209ENST00000478687 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms