RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NSD2O96028 1365 aa20.65■□□□□ 0.9
USP11-207ENST00000478596 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
USP11-207ENST00000478596 IGSF1Q8N6C5 1336 aa20.64■□□□□ 0.89
USP11-207ENST00000478596 CLSPNQ9HAW4 1339 aa20.64■□□□□ 0.89
USP11-207ENST00000478596 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
USP11-207ENST00000478596 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
USP11-207ENST00000478596 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
USP11-207ENST00000478596 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
USP11-207ENST00000478596 PCNTO95613 3336 aa20.62■□□□□ 0.89
USP11-207ENST00000478596 WDR90Q96KV7 1748 aa20.62■□□□□ 0.89
USP11-207ENST00000478596 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
USP11-207ENST00000478596 SLC34A2O95436 690 aa20.61■□□□□ 0.89
USP11-207ENST00000478596 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
USP11-207ENST00000478596 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
USP11-207ENST00000478596 ANKRD24Q8TF21 1146 aa20.61■□□□□ 0.89
USP11-207ENST00000478596 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
USP11-207ENST00000478596 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
USP11-207ENST00000478596 KAT6BQ8WYB5 2073 aa20.59■□□□□ 0.89
USP11-207ENST00000478596 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
USP11-207ENST00000478596 HMGB2P26583 209 aaKnown RBP20.58■□□□□ 0.89
USP11-207ENST00000478596 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
USP11-207ENST00000478596 HTRA3P83110 453 aa20.56■□□□□ 0.88
USP11-207ENST00000478596 NMRK2Q9NPI5 230 aa20.56■□□□□ 0.88
USP11-207ENST00000478596 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
USP11-207ENST00000478596 USP47Q96K76 1375 aa20.56■□□□□ 0.88
USP11-207ENST00000478596 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
USP11-207ENST00000478596 FSTL1Q12841 308 aa20.55■□□□□ 0.88
USP11-207ENST00000478596 DOT1LQ8TEK3 1739 aa20.53■□□□□ 0.88
USP11-207ENST00000478596 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
USP11-207ENST00000478596 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
USP11-207ENST00000478596 C5P01031 1676 aa20.49■□□□□ 0.87
USP11-207ENST00000478596 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
USP11-207ENST00000478596 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
USP11-207ENST00000478596 LTN1O94822 1766 aa20.47■□□□□ 0.87
USP11-207ENST00000478596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.46■□□□□ 0.87
USP11-207ENST00000478596 IP6K1Q92551 441 aa20.46■□□□□ 0.87
USP11-207ENST00000478596 AMIGO3Q86WK7 504 aa20.45■□□□□ 0.86
USP11-207ENST00000478596 NME9Q86XW9 330 aa20.45■□□□□ 0.86
USP11-207ENST00000478596 FAM208AQ9UK61 1670 aaKnown RBP20.45■□□□□ 0.86
USP11-207ENST00000478596 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
USP11-207ENST00000478596 C10orf71Q711Q0 1435 aa20.44■□□□□ 0.86
USP11-207ENST00000478596 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
USP11-207ENST00000478596 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
USP11-207ENST00000478596 AK7Q96M32 723 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 MON2Q7Z3U7 1717 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
USP11-207ENST00000478596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.42■□□□□ 0.86
USP11-207ENST00000478596 TGFB2P61812 414 aa20.42■□□□□ 0.86
USP11-207ENST00000478596 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 BCS1LQ9Y276 419 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 MEGF6O75095 1541 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 C4BP0C0L5 1744 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
USP11-207ENST00000478596 SSFA2P28290 1259 aa20.4■□□□□ 0.86
USP11-207ENST00000478596 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
USP11-207ENST00000478596 PCDH10Q9P2E7 1040 aa20.4■□□□□ 0.86
USP11-207ENST00000478596 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.86
USP11-207ENST00000478596 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
USP11-207ENST00000478596 PHF14O94880 888 aa20.39■□□□□ 0.85
USP11-207ENST00000478596 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
USP11-207ENST00000478596 C9orf131Q5VYM1 1079 aa20.38■□□□□ 0.85
USP11-207ENST00000478596 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
USP11-207ENST00000478596 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
USP11-207ENST00000478596 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
USP11-207ENST00000478596 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
USP11-207ENST00000478596 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
USP11-207ENST00000478596 UBR3Q6ZT12 1888 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 KIF13BQ9NQT8 1826 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 A0A0G2JLW4 131 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 MMP10P09238 476 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 KCPQ6ZWJ8 1503 aa20.35■□□□□ 0.85
USP11-207ENST00000478596 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
USP11-207ENST00000478596 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
USP11-207ENST00000478596 RRAGCQ9HB90 399 aa20.33■□□□□ 0.85
USP11-207ENST00000478596 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
USP11-207ENST00000478596 FCHSD2O94868 740 aa20.32■□□□□ 0.84
USP11-207ENST00000478596 HOXC9P31274 260 aa20.32■□□□□ 0.84
USP11-207ENST00000478596 DPEP1P16444 411 aa20.3■□□□□ 0.84
USP11-207ENST00000478596 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
USP11-207ENST00000478596 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
USP11-207ENST00000478596 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
USP11-207ENST00000478596 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
USP11-207ENST00000478596 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
USP11-207ENST00000478596 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
USP11-207ENST00000478596 N4BP2Q86UW6 1770 aaPredicted RBP20.29■□□□□ 0.84
USP11-207ENST00000478596 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
USP11-207ENST00000478596 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
USP11-207ENST00000478596 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
USP11-207ENST00000478596 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
USP11-207ENST00000478596 GNPATO15228 680 aa20.27■□□□□ 0.84
USP11-207ENST00000478596 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
USP11-207ENST00000478596 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 KCNA3P22001 575 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 AMPHP49418 695 aa20.26■□□□□ 0.83
USP11-207ENST00000478596 SIK1P57059 783 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms