RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
NPHP4-208ENST00000478423 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
NPHP4-208ENST00000478423 IL16Q14005 1332 aa17.02■□□□□ 0.32
NPHP4-208ENST00000478423 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.31
NPHP4-208ENST00000478423 RRP12Q5JTH9 1297 aaKnown RBP17.02■□□□□ 0.31
NPHP4-208ENST00000478423 FIBPO43427 364 aa17.02■□□□□ 0.31
NPHP4-208ENST00000478423 KDM4AO75164 1064 aa17.02■□□□□ 0.31
NPHP4-208ENST00000478423 STARD3NLO95772 234 aa17.02■□□□□ 0.31
NPHP4-208ENST00000478423 MX1P20591 662 aa17.02■□□□□ 0.31
NPHP4-208ENST00000478423 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
NPHP4-208ENST00000478423 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
NPHP4-208ENST00000478423 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
NPHP4-208ENST00000478423 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
NPHP4-208ENST00000478423 MBD3O95983 291 aa17■□□□□ 0.31
NPHP4-208ENST00000478423 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
NPHP4-208ENST00000478423 DDX24Q9GZR7 859 aaKnown RBP eCLIP17■□□□□ 0.31
NPHP4-208ENST00000478423 TPM3P06753 285 aa17■□□□□ 0.31
NPHP4-208ENST00000478423 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
NPHP4-208ENST00000478423 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
NPHP4-208ENST00000478423 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
NPHP4-208ENST00000478423 BLOC1S2Q6QNY1 142 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
NPHP4-208ENST00000478423 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
NPHP4-208ENST00000478423 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 MRE11P49959 708 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 STK3Q13188 491 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 MYD88Q99836 296 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 IGHDP01880 384 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
NPHP4-208ENST00000478423 PTPRCP08575 1304 aa16.98■□□□□ 0.31
NPHP4-208ENST00000478423 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
NPHP4-208ENST00000478423 HOOK1Q9UJC3 728 aaKnown RBP16.98■□□□□ 0.31
NPHP4-208ENST00000478423 POLR3AO14802 1390 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-208ENST00000478423 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
NPHP4-208ENST00000478423 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
NPHP4-208ENST00000478423 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
NPHP4-208ENST00000478423 ANXA1P04083 346 aa16.97■□□□□ 0.31
NPHP4-208ENST00000478423 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
NPHP4-208ENST00000478423 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-208ENST00000478423 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
NPHP4-208ENST00000478423 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
NPHP4-208ENST00000478423 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 TPM1P09493 284 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 XBP1P17861 261 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 ADGRL2O95490 1459 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
NPHP4-208ENST00000478423 ANKRD1Q15327 319 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
NPHP4-208ENST00000478423 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.3
NPHP4-208ENST00000478423 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.3
NPHP4-208ENST00000478423 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
NPHP4-208ENST00000478423 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
NPHP4-208ENST00000478423 FMNL2Q96PY5 1086 aa16.95■□□□□ 0.3
NPHP4-208ENST00000478423 PCDHB15Q9Y5E8 787 aa16.95■□□□□ 0.3
NPHP4-208ENST00000478423 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
NPHP4-208ENST00000478423 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
NPHP4-208ENST00000478423 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
NPHP4-208ENST00000478423 ZMYM3Q14202 1370 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 A0A087WZG4 1122 aa16.94■□□□□ 0.3
NPHP4-208ENST00000478423 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
NPHP4-208ENST00000478423 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 BRMS1Q9HCU9 246 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
NPHP4-208ENST00000478423 ANKRD20A12PQ8NF67 263 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-208ENST00000478423 CIZ1Q9ULV3 898 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-208ENST00000478423 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 PLEKHH1Q9ULM0 1364 aa16.93■□□□□ 0.3
NPHP4-208ENST00000478423 KINO60870 393 aaKnown RBP16.93■□□□□ 0.3
NPHP4-208ENST00000478423 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
NPHP4-208ENST00000478423 MCM4P33991 863 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 METTL24Q5JXM2 366 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 ARHGAP45Q92619 1136 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-208ENST00000478423 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 PHACTR3Q96KR7 559 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 KCNA6P17658 529 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 ZNF592Q92610 1267 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
NPHP4-208ENST00000478423 UHRF1BP1Q6BDS2 1440 aa16.91■□□□□ 0.3
NPHP4-208ENST00000478423 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
NPHP4-208ENST00000478423 TPM2P07951 284 aa16.91■□□□□ 0.3
NPHP4-208ENST00000478423 MEIS3Q99687 375 aa16.91■□□□□ 0.3
NPHP4-208ENST00000478423 STK38Q15208 465 aa16.91■□□□□ 0.3
NPHP4-208ENST00000478423 SLC3A2P08195 630 aaKnown RBP16.9■□□□□ 0.3
NPHP4-208ENST00000478423 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
NPHP4-208ENST00000478423 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms