RNA–Protein interactions for RNA: ENST00000478303.5

CCDC144A-213, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 935 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-213ENST00000478303 NHSQ6T4R5 1651 aa23.34■■□□□ 1.33
CCDC144A-213ENST00000478303 ZCRB1Q8TBF4 217 aaKnown RBP23.33■■□□□ 1.33
CCDC144A-213ENST00000478303 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.32
CCDC144A-213ENST00000478303 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
CCDC144A-213ENST00000478303 DIAPH1O60610 1272 aaKnown RBP23.31■■□□□ 1.32
CCDC144A-213ENST00000478303 TRIM37O94972 964 aa23.31■■□□□ 1.32
CCDC144A-213ENST00000478303 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
CCDC144A-213ENST00000478303 IL13P35225 146 aa23.31■■□□□ 1.32
CCDC144A-213ENST00000478303 PLEKHG2Q9H7P9 1386 aa23.3■■□□□ 1.32
CCDC144A-213ENST00000478303 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
CCDC144A-213ENST00000478303 CFAP53Q96M91 514 aa23.3■■□□□ 1.32
CCDC144A-213ENST00000478303 RGPD3A6NKT7 1758 aaPredicted RBP23.29■■□□□ 1.32
CCDC144A-213ENST00000478303 RGPD4Q7Z3J3 1758 aa23.29■■□□□ 1.32
CCDC144A-213ENST00000478303 PCDH11XQ9BZA7 1347 aa23.29■■□□□ 1.32
CCDC144A-213ENST00000478303 PCDH11YQ9BZA8 1340 aa23.29■■□□□ 1.32
CCDC144A-213ENST00000478303 BAG6P46379 1132 aa23.28■■□□□ 1.32
CCDC144A-213ENST00000478303 BTAF1O14981 1849 aa23.27■■□□□ 1.32
CCDC144A-213ENST00000478303 RALBP1Q15311 655 aa23.27■■□□□ 1.32
CCDC144A-213ENST00000478303 KDRP35968 1356 aa23.27■■□□□ 1.31
CCDC144A-213ENST00000478303 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
CCDC144A-213ENST00000478303 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
CCDC144A-213ENST00000478303 SULT6B1Q6IMI4 303 aa23.25■■□□□ 1.31
CCDC144A-213ENST00000478303 ITGB4P16144 1822 aa23.24■■□□□ 1.31
CCDC144A-213ENST00000478303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.24■■□□□ 1.31
CCDC144A-213ENST00000478303 RREB1Q92766 1687 aa23.23■■□□□ 1.31
CCDC144A-213ENST00000478303 DEFB132Q7Z7B7 95 aa23.23■■□□□ 1.31
CCDC144A-213ENST00000478303 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
CCDC144A-213ENST00000478303 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
CCDC144A-213ENST00000478303 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
CCDC144A-213ENST00000478303 APBA3O96018 575 aa23.22■■□□□ 1.31
CCDC144A-213ENST00000478303 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
CCDC144A-213ENST00000478303 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
CCDC144A-213ENST00000478303 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
CCDC144A-213ENST00000478303 CYP27B1O15528 508 aa23.19■■□□□ 1.3
CCDC144A-213ENST00000478303 HMOX1P09601 288 aa23.19■■□□□ 1.3
CCDC144A-213ENST00000478303 EN1Q05925 392 aaPredicted RBP23.19■■□□□ 1.3
CCDC144A-213ENST00000478303 AMOTQ4VCS5 1084 aa23.19■■□□□ 1.3
CCDC144A-213ENST00000478303 PLEKHO1Q53GL0 409 aaPredicted RBP23.19■■□□□ 1.3
CCDC144A-213ENST00000478303 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
CCDC144A-213ENST00000478303 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
CCDC144A-213ENST00000478303 NUP188Q5SRE5 1749 aa23.18■■□□□ 1.3
CCDC144A-213ENST00000478303 KCNQ2O43526 872 aa23.17■■□□□ 1.3
CCDC144A-213ENST00000478303 SCN11AQ9UI33 1791 aa23.16■■□□□ 1.3
CCDC144A-213ENST00000478303 PLSCR1O15162 318 aa23.15■■□□□ 1.3
CCDC144A-213ENST00000478303 PHKG2P15735 406 aa23.15■■□□□ 1.3
CCDC144A-213ENST00000478303 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
CCDC144A-213ENST00000478303 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
CCDC144A-213ENST00000478303 PRKRIP1Q9H875 184 aaPredicted RBP23.15■■□□□ 1.3
CCDC144A-213ENST00000478303 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
CCDC144A-213ENST00000478303 EZH2Q15910 746 aaKnown RBP23.14■■□□□ 1.29
CCDC144A-213ENST00000478303 ZNF530Q6P9A1 599 aaPredicted RBP23.14■■□□□ 1.29
CCDC144A-213ENST00000478303 CAMKK2Q96RR4 588 aa23.13■■□□□ 1.29
CCDC144A-213ENST00000478303 LY75O60449 1722 aa23.13■■□□□ 1.29
CCDC144A-213ENST00000478303 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
CCDC144A-213ENST00000478303 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
CCDC144A-213ENST00000478303 HSP90AB1P08238 724 aaKnown RBP23.11■■□□□ 1.29
CCDC144A-213ENST00000478303 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
CCDC144A-213ENST00000478303 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
CCDC144A-213ENST00000478303 DCAF5Q96JK2 942 aa23.07■■□□□ 1.28
CCDC144A-213ENST00000478303 RSPH6AQ9H0K4 717 aa23.07■■□□□ 1.28
CCDC144A-213ENST00000478303 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
CCDC144A-213ENST00000478303 FCHSD2O94868 740 aa23.06■■□□□ 1.28
CCDC144A-213ENST00000478303 PRKAR2BP31323 418 aa23.06■■□□□ 1.28
CCDC144A-213ENST00000478303 AKAP4Q5JQC9 854 aa23.06■■□□□ 1.28
CCDC144A-213ENST00000478303 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
CCDC144A-213ENST00000478303 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
CCDC144A-213ENST00000478303 MPRIPQ6WCQ1 1025 aa23.05■■□□□ 1.28
CCDC144A-213ENST00000478303 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
CCDC144A-213ENST00000478303 ANP32CO43423 234 aa23.04■■□□□ 1.28
CCDC144A-213ENST00000478303 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
CCDC144A-213ENST00000478303 TXNRD1Q16881 649 aa23.03■■□□□ 1.28
CCDC144A-213ENST00000478303 TMOD3Q9NYL9 352 aa23.03■■□□□ 1.28
CCDC144A-213ENST00000478303 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
CCDC144A-213ENST00000478303 ERVV-2B6SEH9 535 aa23.02■■□□□ 1.28
CCDC144A-213ENST00000478303 NEFMP07197 916 aa23.02■■□□□ 1.28
CCDC144A-213ENST00000478303 PNNQ9H307 717 aaKnown RBP23.01■■□□□ 1.27
CCDC144A-213ENST00000478303 NBPF14Q5TI25 921 aa23■■□□□ 1.27
CCDC144A-213ENST00000478303 PROM2Q8N271 834 aa23■■□□□ 1.27
CCDC144A-213ENST00000478303 PAPPAQ13219 1627 aa23■■□□□ 1.27
CCDC144A-213ENST00000478303 MAP3K5Q99683 1374 aa23■■□□□ 1.27
CCDC144A-213ENST00000478303 C5P01031 1676 aa23■■□□□ 1.27
CCDC144A-213ENST00000478303 PIGBQ92521 554 aa22.99■■□□□ 1.27
CCDC144A-213ENST00000478303 SIPA1L3O60292 1781 aaPredicted RBP22.99■■□□□ 1.27
CCDC144A-213ENST00000478303 MRC1P22897 1456 aa22.98■■□□□ 1.27
CCDC144A-213ENST00000478303 CABP4P57796 275 aa22.98■■□□□ 1.27
CCDC144A-213ENST00000478303 SMARCC1Q92922 1105 aaPredicted RBP22.98■■□□□ 1.27
CCDC144A-213ENST00000478303 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
CCDC144A-213ENST00000478303 PALLDQ8WX93 1383 aa22.98■■□□□ 1.27
CCDC144A-213ENST00000478303 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC144A-213ENST00000478303 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
CCDC144A-213ENST00000478303 GNAT3A8MTJ3 354 aa22.96■■□□□ 1.27
CCDC144A-213ENST00000478303 ZNF831Q5JPB2 1677 aa22.96■■□□□ 1.27
CCDC144A-213ENST00000478303 RNMTO43148 476 aaKnown RBP22.95■■□□□ 1.26
CCDC144A-213ENST00000478303 QSER1Q2KHR3 1735 aa22.95■■□□□ 1.26
CCDC144A-213ENST00000478303 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
CCDC144A-213ENST00000478303 LGR6Q9HBX8 967 aa22.94■■□□□ 1.26
CCDC144A-213ENST00000478303 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
CCDC144A-213ENST00000478303 TUBGCP6Q96RT7 1819 aa22.94■■□□□ 1.26
CCDC144A-213ENST00000478303 PLEKHF1Q96S99 279 aa22.93■■□□□ 1.26
CCDC144A-213ENST00000478303 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms