RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
CDHR3-211ENST00000478080 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
CDHR3-211ENST00000478080 KDRP35968 1356 aa11.21□□□□□ -0.62
CDHR3-211ENST00000478080 DAXXQ9UER7 740 aaPredicted RBP11.21□□□□□ -0.62
CDHR3-211ENST00000478080 NUCB1Q02818 461 aa11.2□□□□□ -0.62
CDHR3-211ENST00000478080 ORAI2Q96SN7 254 aa11.2□□□□□ -0.62
CDHR3-211ENST00000478080 API5Q9BZZ5 524 aaKnown RBP11.2□□□□□ -0.62
CDHR3-211ENST00000478080 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
CDHR3-211ENST00000478080 PSME1Q06323 249 aa11.2□□□□□ -0.62
CDHR3-211ENST00000478080 SETD1BQ9UPS6 1966 aaKnown RBP11.19□□□□□ -0.62
CDHR3-211ENST00000478080 ADAMTSL3P82987 1691 aa11.19□□□□□ -0.62
CDHR3-211ENST00000478080 ANKRD45Q5TZF3 282 aa11.19□□□□□ -0.62
CDHR3-211ENST00000478080 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
CDHR3-211ENST00000478080 CHD1LQ86WJ1 897 aa11.19□□□□□ -0.62
CDHR3-211ENST00000478080 G2E3Q7L622 706 aa11.18□□□□□ -0.62
CDHR3-211ENST00000478080 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
CDHR3-211ENST00000478080 RGS12O14924 1447 aa11.18□□□□□ -0.62
CDHR3-211ENST00000478080 ZNF142P52746 1687 aaPredicted RBP11.18□□□□□ -0.62
CDHR3-211ENST00000478080 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
CDHR3-211ENST00000478080 NWD1Q149M9 1564 aa11.17□□□□□ -0.62
CDHR3-211ENST00000478080 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
CDHR3-211ENST00000478080 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
CDHR3-211ENST00000478080 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
CDHR3-211ENST00000478080 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
CDHR3-211ENST00000478080 F6X3S4 739 aa11.17□□□□□ -0.62
CDHR3-211ENST00000478080 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
CDHR3-211ENST00000478080 NBPF6Q5VWK0 638 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 LMOD2Q6P5Q4 547 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 NBPF4Q96M43 638 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 ADGRL3Q9HAR2 1447 aa11.16□□□□□ -0.62
CDHR3-211ENST00000478080 INTS3Q68E01 1043 aaKnown RBP11.16□□□□□ -0.62
CDHR3-211ENST00000478080 LRRC59Q96AG4 307 aaKnown RBP11.15□□□□□ -0.62
CDHR3-211ENST00000478080 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
CDHR3-211ENST00000478080 LTN1O94822 1766 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 MSH6P52701 1360 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 SLC4A10Q6U841 1118 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 IP6K1Q92551 441 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 GCC1Q96CN9 775 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 MEIS3Q99687 375 aa11.15□□□□□ -0.62
CDHR3-211ENST00000478080 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
CDHR3-211ENST00000478080 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-211ENST00000478080 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
CDHR3-211ENST00000478080 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
CDHR3-211ENST00000478080 APBB1O00213 710 aa11.13□□□□□ -0.63
CDHR3-211ENST00000478080 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-211ENST00000478080 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-211ENST00000478080 NFAT5O94916 1531 aa11.13□□□□□ -0.63
CDHR3-211ENST00000478080 USP54Q70EL1 1684 aa11.13□□□□□ -0.63
CDHR3-211ENST00000478080 PTPRCP08575 1304 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 NFKBIBQ15653 356 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 C22orf23Q9BZE7 217 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 HTATSF1O43719 755 aaKnown RBP11.12□□□□□ -0.63
CDHR3-211ENST00000478080 GCP02774 474 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 RGPD2P0DJD1 1756 aa11.12□□□□□ -0.63
CDHR3-211ENST00000478080 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 DDX17Q92841 729 aaKnown RBP11.11□□□□□ -0.63
CDHR3-211ENST00000478080 SLKQ9H2G2 1235 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-211ENST00000478080 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
CDHR3-211ENST00000478080 ANKRD44Q8N8A2 993 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 DCTPP1Q9H773 170 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 RTL1A6NKG5 1358 aa11.11□□□□□ -0.63
CDHR3-211ENST00000478080 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-211ENST00000478080 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
CDHR3-211ENST00000478080 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
CDHR3-211ENST00000478080 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-211ENST00000478080 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
CDHR3-211ENST00000478080 STK31Q9BXU1 1019 aa11.1□□□□□ -0.63
CDHR3-211ENST00000478080 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
CDHR3-211ENST00000478080 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 KCNQ3O43525 872 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 FLIIQ13045 1269 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-211ENST00000478080 BMP2KLQ5H9B9 411 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 BECN1Q14457 450 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
CDHR3-211ENST00000478080 FRAT2O75474 233 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
CDHR3-211ENST00000478080 MPRIPQ6WCQ1 1025 aa11.08□□□□□ -0.64
CDHR3-211ENST00000478080 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
CDHR3-211ENST00000478080 GSPT1P15170 499 aaKnown RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 EIF2S2P20042 333 aaKnown RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 ZC3H6P61129 1189 aaKnown RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 RPAP2Q8IXW5 612 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 PHAXQ9H814 394 aaKnown RBP11.08□□□□□ -0.64
CDHR3-211ENST00000478080 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-211ENST00000478080 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
CDHR3-211ENST00000478080 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
CDHR3-211ENST00000478080 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
CDHR3-211ENST00000478080 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
CDHR3-211ENST00000478080 C19orf44Q9H6X5 657 aa11.06□□□□□ -0.64
CDHR3-211ENST00000478080 USP35Q9P2H5 1018 aa11.06□□□□□ -0.64
CDHR3-211ENST00000478080 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms