RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 EZH2Q15910 746 aaKnown RBP30.41■■■□□ 2.46
SF1-214ENST00000477596 ZCRB1Q8TBF4 217 aaKnown RBP30.41■■■□□ 2.46
SF1-214ENST00000477596 ACSBG1Q96GR2 724 aa30.41■■■□□ 2.46
SF1-214ENST00000477596 PKD1L3Q7Z443 1732 aa30.39■■■□□ 2.46
SF1-214ENST00000477596 KCNQ2O43526 872 aa30.39■■■□□ 2.46
SF1-214ENST00000477596 CAMKK2Q96RR4 588 aa30.39■■■□□ 2.46
SF1-214ENST00000477596 MTHFSP49914 203 aa30.38■■■□□ 2.45
SF1-214ENST00000477596 BCL11BQ9C0K0 894 aaPredicted RBP30.38■■■□□ 2.45
SF1-214ENST00000477596 RREB1Q92766 1687 aa30.38■■■□□ 2.45
SF1-214ENST00000477596 DOT1LQ8TEK3 1739 aa30.37■■■□□ 2.45
SF1-214ENST00000477596 IGSF1Q8N6C5 1336 aa30.37■■■□□ 2.45
SF1-214ENST00000477596 ZEB1P37275 1124 aaPredicted RBP30.36■■■□□ 2.45
SF1-214ENST00000477596 NUP188Q5SRE5 1749 aa30.34■■■□□ 2.45
SF1-214ENST00000477596 KAT6BQ8WYB5 2073 aa30.33■■■□□ 2.45
SF1-214ENST00000477596 RGPD3A6NKT7 1758 aaPredicted RBP30.33■■■□□ 2.45
SF1-214ENST00000477596 RGPD4Q7Z3J3 1758 aa30.33■■■□□ 2.45
SF1-214ENST00000477596 BTAF1O14981 1849 aa30.32■■■□□ 2.44
SF1-214ENST00000477596 IL13P35225 146 aa30.32■■■□□ 2.44
SF1-214ENST00000477596 AEBP1Q8IUX7 1158 aa30.31■■■□□ 2.44
SF1-214ENST00000477596 COL3A1P02461 1466 aaPredicted RBP30.31■■■□□ 2.44
SF1-214ENST00000477596 PARD3Q8TEW0 1356 aa30.3■■■□□ 2.44
SF1-214ENST00000477596 PCDH11XQ9BZA7 1347 aa30.3■■■□□ 2.44
SF1-214ENST00000477596 PCDH11YQ9BZA8 1340 aa30.3■■■□□ 2.44
SF1-214ENST00000477596 CYP27B1O15528 508 aa30.29■■■□□ 2.44
SF1-214ENST00000477596 TOGARAM1Q9Y4F4 1720 aa30.27■■■□□ 2.44
SF1-214ENST00000477596 PLSCR1O15162 318 aa30.24■■■□□ 2.43
SF1-214ENST00000477596 DDX10Q13206 875 aaKnown RBP30.24■■■□□ 2.43
SF1-214ENST00000477596 PRIM1P49642 420 aaKnown RBP30.23■■■□□ 2.43
SF1-214ENST00000477596 SULT6B1Q6IMI4 303 aa30.23■■■□□ 2.43
SF1-214ENST00000477596 SYTL4Q96C24 671 aaPredicted RBP30.23■■■□□ 2.43
SF1-214ENST00000477596 SPG7Q9UQ90 795 aa30.23■■■□□ 2.43
SF1-214ENST00000477596 PSDA5PKW4 1024 aaPredicted RBP30.22■■■□□ 2.43
SF1-214ENST00000477596 KDRP35968 1356 aa30.22■■■□□ 2.43
SF1-214ENST00000477596 PPP2R1AP30153 589 aa30.21■■■□□ 2.43
SF1-214ENST00000477596 PROM2Q8N271 834 aa30.21■■■□□ 2.43
SF1-214ENST00000477596 DIAPH1O60610 1272 aaKnown RBP30.2■■■□□ 2.43
SF1-214ENST00000477596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.19■■■□□ 2.42
SF1-214ENST00000477596 HMOX1P09601 288 aa30.18■■■□□ 2.42
SF1-214ENST00000477596 PLEKHG2Q9H7P9 1386 aa30.17■■■□□ 2.42
SF1-214ENST00000477596 R3HDM1Q15032 1099 aaKnown RBP30.17■■■□□ 2.42
SF1-214ENST00000477596 TXNRD1Q16881 649 aa30.17■■■□□ 2.42
SF1-214ENST00000477596 PHKG2P15735 406 aa30.16■■■□□ 2.42
SF1-214ENST00000477596 ITGB4P16144 1822 aa30.16■■■□□ 2.42
SF1-214ENST00000477596 NKX1-1Q15270 411 aaPredicted RBP30.14■■■□□ 2.42
SF1-214ENST00000477596 ANO8Q9HCE9 1232 aaPredicted RBP30.14■■■□□ 2.42
SF1-214ENST00000477596 IFNL2Q8IZJ0 200 aa30.13■■■□□ 2.41
SF1-214ENST00000477596 PLEKHO1Q53GL0 409 aaPredicted RBP30.12■■■□□ 2.41
SF1-214ENST00000477596 ZNF530Q6P9A1 599 aaPredicted RBP30.12■■■□□ 2.41
SF1-214ENST00000477596 U2SURPO15042 1029 aaKnown RBP30.11■■■□□ 2.41
SF1-214ENST00000477596 PAPPAQ13219 1627 aa30.1■■■□□ 2.41
SF1-214ENST00000477596 LY75O60449 1722 aa30.1■■■□□ 2.41
SF1-214ENST00000477596 MPRIPQ6WCQ1 1025 aa30.09■■■□□ 2.41
SF1-214ENST00000477596 CFAP53Q96M91 514 aa30.09■■■□□ 2.41
SF1-214ENST00000477596 KDM6AO15550 1401 aaPredicted RBP30.08■■■□□ 2.41
SF1-214ENST00000477596 AMOTQ4VCS5 1084 aa30.08■■■□□ 2.41
SF1-214ENST00000477596 NBPF14Q5TI25 921 aa30.07■■■□□ 2.4
SF1-214ENST00000477596 LRRC4BQ9NT99 713 aa30.07■■■□□ 2.4
SF1-214ENST00000477596 KCNQ4P56696 695 aa30.06■■■□□ 2.4
SF1-214ENST00000477596 PIGBQ92521 554 aa30.04■■■□□ 2.4
SF1-214ENST00000477596 SRCAPQ6ZRS2 3230 aa30.04■■■□□ 2.4
SF1-214ENST00000477596 C1orf141Q5JVX7 400 aa30.01■■■□□ 2.39
SF1-214ENST00000477596 PALLDQ8WX93 1383 aa30.01■■■□□ 2.39
SF1-214ENST00000477596 DCAF5Q96JK2 942 aa30■■■□□ 2.39
SF1-214ENST00000477596 TMOD3Q9NYL9 352 aa30■■■□□ 2.39
SF1-214ENST00000477596 MTHFSDQ2M296 383 aaKnown RBP29.99■■■□□ 2.39
SF1-214ENST00000477596 HSP90AB1P08238 724 aaKnown RBP29.98■■■□□ 2.39
SF1-214ENST00000477596 RALBP1Q15311 655 aa29.98■■■□□ 2.39
SF1-214ENST00000477596 ZNF827Q17R98 1081 aa29.98■■■□□ 2.39
SF1-214ENST00000477596 STK32BQ9NY57 414 aa29.98■■■□□ 2.39
SF1-214ENST00000477596 SCN11AQ9UI33 1791 aa29.98■■■□□ 2.39
SF1-214ENST00000477596 SLC27A3Q5K4L6 730 aa29.97■■■□□ 2.39
SF1-214ENST00000477596 RSPH6AQ9H0K4 717 aa29.97■■■□□ 2.39
SF1-214ENST00000477596 CCNL1Q9UK58 526 aaPredicted RBP29.97■■■□□ 2.39
SF1-214ENST00000477596 NUDCQ9Y266 331 aa29.97■■■□□ 2.39
SF1-214ENST00000477596 CASZ1Q86V15 1759 aa29.97■■■□□ 2.39
SF1-214ENST00000477596 U2AF1L5P0DN76 240 aaPredicted RBP29.96■■■□□ 2.39
SF1-214ENST00000477596 U2AF1Q01081 240 aaKnown RBP eCLIP29.96■■■□□ 2.39
SF1-214ENST00000477596 SLC15A2Q16348 729 aa29.96■■■□□ 2.39
SF1-214ENST00000477596 PDGFDQ9GZP0 370 aaPredicted RBP29.96■■■□□ 2.39
SF1-214ENST00000477596 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
SF1-214ENST00000477596 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.39
SF1-214ENST00000477596 PRKAR2BP31323 418 aa29.95■■■□□ 2.39
SF1-214ENST00000477596 AKAP4Q5JQC9 854 aa29.95■■■□□ 2.39
SF1-214ENST00000477596 ASAP1Q9ULH1 1129 aa29.95■■■□□ 2.39
SF1-214ENST00000477596 LRP5O75197 1615 aa29.95■■■□□ 2.38
SF1-214ENST00000477596 TUBGCP6Q96RT7 1819 aa29.94■■■□□ 2.38
SF1-214ENST00000477596 C5P01031 1676 aa29.93■■■□□ 2.38
SF1-214ENST00000477596 ERVV-2B6SEH9 535 aa29.93■■■□□ 2.38
SF1-214ENST00000477596 PHACTR3Q96KR7 559 aa29.92■■■□□ 2.38
SF1-214ENST00000477596 TAF1LQ8IZX4 1826 aa29.92■■■□□ 2.38
SF1-214ENST00000477596 ADAMTS7Q9UKP4 1686 aa29.91■■■□□ 2.38
SF1-214ENST00000477596 SMARCC1Q92922 1105 aaPredicted RBP29.91■■■□□ 2.38
SF1-214ENST00000477596 AKT1S1Q96B36 256 aa29.91■■■□□ 2.38
SF1-214ENST00000477596 LGR6Q9HBX8 967 aa29.91■■■□□ 2.38
SF1-214ENST00000477596 ATG3Q9NT62 314 aa29.91■■■□□ 2.38
SF1-214ENST00000477596 MYBBP1AQ9BQG0 1328 aaKnown RBP29.91■■■□□ 2.38
SF1-214ENST00000477596 CABP4P57796 275 aa29.9■■■□□ 2.38
SF1-214ENST00000477596 MRC1P22897 1456 aa29.89■■■□□ 2.38
SF1-214ENST00000477596 RNMTO43148 476 aaKnown RBP29.87■■■□□ 2.37
SF1-214ENST00000477596 NFATC2IPQ8NCF5 419 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms