RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 RGPD3A6NKT7 1758 aaPredicted RBP16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 RGPD4Q7Z3J3 1758 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 KDRP35968 1356 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 SPG7Q9UQ90 795 aa16.72■□□□□ 0.27
CLCNKA-205ENST00000477360 IL13P35225 146 aa16.71■□□□□ 0.27
CLCNKA-205ENST00000477360 RGPD2P0DJD1 1756 aa16.7■□□□□ 0.26
CLCNKA-205ENST00000477360 HMGB2P26583 209 aaKnown RBP16.7■□□□□ 0.26
CLCNKA-205ENST00000477360 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-205ENST00000477360 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
CLCNKA-205ENST00000477360 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
CLCNKA-205ENST00000477360 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
CLCNKA-205ENST00000477360 EN1Q05925 392 aaPredicted RBP16.69■□□□□ 0.26
CLCNKA-205ENST00000477360 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
CLCNKA-205ENST00000477360 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
CLCNKA-205ENST00000477360 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
CLCNKA-205ENST00000477360 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
CLCNKA-205ENST00000477360 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
CLCNKA-205ENST00000477360 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
CLCNKA-205ENST00000477360 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
CLCNKA-205ENST00000477360 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
CLCNKA-205ENST00000477360 CYP27B1O15528 508 aa16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 PPP2R1AP30153 589 aa16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 RALBP1Q15311 655 aa16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 EZH2Q15910 746 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 IFNL2Q8IZJ0 200 aa16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CLCNKA-205ENST00000477360 RREB1Q92766 1687 aa16.64■□□□□ 0.25
CLCNKA-205ENST00000477360 KCNQ2O43526 872 aa16.63■□□□□ 0.25
CLCNKA-205ENST00000477360 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
CLCNKA-205ENST00000477360 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
CLCNKA-205ENST00000477360 PHKG2P15735 406 aa16.62■□□□□ 0.25
CLCNKA-205ENST00000477360 SLC27A3Q5K4L6 730 aa16.62■□□□□ 0.25
CLCNKA-205ENST00000477360 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
CLCNKA-205ENST00000477360 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
CLCNKA-205ENST00000477360 PTF1AQ7RTS3 328 aa16.61■□□□□ 0.25
CLCNKA-205ENST00000477360 ACSBG1Q96GR2 724 aa16.61■□□□□ 0.25
CLCNKA-205ENST00000477360 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-205ENST00000477360 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
CLCNKA-205ENST00000477360 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
CLCNKA-205ENST00000477360 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
CLCNKA-205ENST00000477360 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
CLCNKA-205ENST00000477360 PROM2Q8N271 834 aa16.59■□□□□ 0.25
CLCNKA-205ENST00000477360 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
CLCNKA-205ENST00000477360 BTAF1O14981 1849 aa16.57■□□□□ 0.24
CLCNKA-205ENST00000477360 NUP188Q5SRE5 1749 aa16.57■□□□□ 0.24
CLCNKA-205ENST00000477360 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
CLCNKA-205ENST00000477360 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
CLCNKA-205ENST00000477360 FCHSD2O94868 740 aa16.56■□□□□ 0.24
CLCNKA-205ENST00000477360 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
CLCNKA-205ENST00000477360 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
CLCNKA-205ENST00000477360 SYTL4Q96C24 671 aaPredicted RBP16.56■□□□□ 0.24
CLCNKA-205ENST00000477360 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
CLCNKA-205ENST00000477360 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-205ENST00000477360 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-205ENST00000477360 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
CLCNKA-205ENST00000477360 HMOX1P09601 288 aa16.52■□□□□ 0.24
CLCNKA-205ENST00000477360 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.24
CLCNKA-205ENST00000477360 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
CLCNKA-205ENST00000477360 PIGBQ92521 554 aa16.52■□□□□ 0.24
CLCNKA-205ENST00000477360 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-205ENST00000477360 LY75O60449 1722 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 PAPPAQ13219 1627 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
CLCNKA-205ENST00000477360 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
CLCNKA-205ENST00000477360 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
CLCNKA-205ENST00000477360 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-205ENST00000477360 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLCNKA-205ENST00000477360 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
CLCNKA-205ENST00000477360 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
CLCNKA-205ENST00000477360 MRC1P22897 1456 aa16.48■□□□□ 0.23
CLCNKA-205ENST00000477360 CABP4P57796 275 aa16.48■□□□□ 0.23
CLCNKA-205ENST00000477360 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
CLCNKA-205ENST00000477360 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-205ENST00000477360 ADAMTS7Q9UKP4 1686 aa16.48■□□□□ 0.23
CLCNKA-205ENST00000477360 ITGB4P16144 1822 aa16.47■□□□□ 0.23
CLCNKA-205ENST00000477360 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
CLCNKA-205ENST00000477360 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
CLCNKA-205ENST00000477360 PRKAR2BP31323 418 aa16.47■□□□□ 0.23
CLCNKA-205ENST00000477360 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
CLCNKA-205ENST00000477360 LRP5O75197 1615 aa16.46■□□□□ 0.23
CLCNKA-205ENST00000477360 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
CLCNKA-205ENST00000477360 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
CLCNKA-205ENST00000477360 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
CLCNKA-205ENST00000477360 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
CLCNKA-205ENST00000477360 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
CLCNKA-205ENST00000477360 RNMTO43148 476 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-205ENST00000477360 NEFMP07197 916 aa16.45■□□□□ 0.22
CLCNKA-205ENST00000477360 SIK1P57059 783 aa16.45■□□□□ 0.22
CLCNKA-205ENST00000477360 FLAD1Q8NFF5 587 aa16.45■□□□□ 0.22
CLCNKA-205ENST00000477360 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms