RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
RAB5A-208ENST00000476544 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
RAB5A-208ENST00000476544 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
RAB5A-208ENST00000476544 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
RAB5A-208ENST00000476544 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
RAB5A-208ENST00000476544 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
RAB5A-208ENST00000476544 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
RAB5A-208ENST00000476544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB5A-208ENST00000476544 RGPD2P0DJD1 1756 aa18.57■□□□□ 0.56
RAB5A-208ENST00000476544 PSDA5PKW4 1024 aaPredicted RBP18.56■□□□□ 0.56
RAB5A-208ENST00000476544 TXNRD1Q16881 649 aa18.55■□□□□ 0.56
RAB5A-208ENST00000476544 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
RAB5A-208ENST00000476544 MAP2P11137 1827 aaKnown RBP18.54■□□□□ 0.56
RAB5A-208ENST00000476544 R3HDM1Q15032 1099 aaKnown RBP18.54■□□□□ 0.56
RAB5A-208ENST00000476544 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
RAB5A-208ENST00000476544 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
RAB5A-208ENST00000476544 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
RAB5A-208ENST00000476544 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
RAB5A-208ENST00000476544 PPP2R1AP30153 589 aa18.53■□□□□ 0.56
RAB5A-208ENST00000476544 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
RAB5A-208ENST00000476544 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
RAB5A-208ENST00000476544 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.56
RAB5A-208ENST00000476544 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
RAB5A-208ENST00000476544 PHKG2P15735 406 aa18.51■□□□□ 0.55
RAB5A-208ENST00000476544 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
RAB5A-208ENST00000476544 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
RAB5A-208ENST00000476544 RGPD1P0DJD0 1748 aa18.5■□□□□ 0.55
RAB5A-208ENST00000476544 DIAPH1O60610 1272 aaKnown RBP18.5■□□□□ 0.55
RAB5A-208ENST00000476544 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
RAB5A-208ENST00000476544 KCNQ4P56696 695 aa18.5■□□□□ 0.55
RAB5A-208ENST00000476544 SYTL4Q96C24 671 aaPredicted RBP18.5■□□□□ 0.55
RAB5A-208ENST00000476544 KDRP35968 1356 aa18.5■□□□□ 0.55
RAB5A-208ENST00000476544 PIGBQ92521 554 aa18.49■□□□□ 0.55
RAB5A-208ENST00000476544 HMOX1P09601 288 aa18.48■□□□□ 0.55
RAB5A-208ENST00000476544 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
RAB5A-208ENST00000476544 PDGFDQ9GZP0 370 aaPredicted RBP18.48■□□□□ 0.55
RAB5A-208ENST00000476544 SBF2Q86WG5 1849 aa18.47■□□□□ 0.55
RAB5A-208ENST00000476544 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
RAB5A-208ENST00000476544 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
RAB5A-208ENST00000476544 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.54
RAB5A-208ENST00000476544 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
RAB5A-208ENST00000476544 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
RAB5A-208ENST00000476544 SHANK3Q9BYB0 1731 aa18.44■□□□□ 0.54
RAB5A-208ENST00000476544 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
RAB5A-208ENST00000476544 PLEKHG2Q9H7P9 1386 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 ZNF827Q17R98 1081 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
RAB5A-208ENST00000476544 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
RAB5A-208ENST00000476544 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
RAB5A-208ENST00000476544 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
RAB5A-208ENST00000476544 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
RAB5A-208ENST00000476544 ERVV-2B6SEH9 535 aa18.4■□□□□ 0.54
RAB5A-208ENST00000476544 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
RAB5A-208ENST00000476544 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
RAB5A-208ENST00000476544 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
RAB5A-208ENST00000476544 KDM6AO15550 1401 aaPredicted RBP18.39■□□□□ 0.53
RAB5A-208ENST00000476544 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
RAB5A-208ENST00000476544 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
RAB5A-208ENST00000476544 RREB1Q92766 1687 aa18.38■□□□□ 0.53
RAB5A-208ENST00000476544 NFATC2IPQ8NCF5 419 aa18.37■□□□□ 0.53
RAB5A-208ENST00000476544 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
RAB5A-208ENST00000476544 STK32BQ9NY57 414 aa18.37■□□□□ 0.53
RAB5A-208ENST00000476544 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
RAB5A-208ENST00000476544 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
RAB5A-208ENST00000476544 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
RAB5A-208ENST00000476544 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
RAB5A-208ENST00000476544 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
RAB5A-208ENST00000476544 NUP188Q5SRE5 1749 aa18.35■□□□□ 0.53
RAB5A-208ENST00000476544 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
RAB5A-208ENST00000476544 RALBP1Q15311 655 aa18.35■□□□□ 0.53
RAB5A-208ENST00000476544 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
RAB5A-208ENST00000476544 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
RAB5A-208ENST00000476544 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
RAB5A-208ENST00000476544 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
RAB5A-208ENST00000476544 ITPK1Q13572 414 aa18.34■□□□□ 0.53
RAB5A-208ENST00000476544 C1orf141Q5JVX7 400 aa18.34■□□□□ 0.53
RAB5A-208ENST00000476544 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
RAB5A-208ENST00000476544 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
RAB5A-208ENST00000476544 BTAF1O14981 1849 aa18.34■□□□□ 0.53
RAB5A-208ENST00000476544 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 FCHSD2O94868 740 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 SIK1P57059 783 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 CABP4P57796 275 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 SMIM5Q71RC9 77 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 NUDCQ9Y266 331 aa18.33■□□□□ 0.52
RAB5A-208ENST00000476544 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
RAB5A-208ENST00000476544 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
RAB5A-208ENST00000476544 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
RAB5A-208ENST00000476544 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
RAB5A-208ENST00000476544 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
RAB5A-208ENST00000476544 TOGARAM1Q9Y4F4 1720 aa18.31■□□□□ 0.52
RAB5A-208ENST00000476544 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
RAB5A-208ENST00000476544 PTGER2P43116 358 aa18.3■□□□□ 0.52
RAB5A-208ENST00000476544 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
RAB5A-208ENST00000476544 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
RAB5A-208ENST00000476544 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms