RNA–Protein interactions for RNA: ENST00000476038.5

LCLAT1-207, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-207ENST00000476038 NME9Q86XW9 330 aa13.8□□□□□ -0.2
LCLAT1-207ENST00000476038 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
LCLAT1-207ENST00000476038 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
LCLAT1-207ENST00000476038 SBNO2Q9Y2G9 1366 aa13.8□□□□□ -0.2
LCLAT1-207ENST00000476038 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
LCLAT1-207ENST00000476038 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
LCLAT1-207ENST00000476038 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
LCLAT1-207ENST00000476038 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
LCLAT1-207ENST00000476038 CD163L1Q9NR16 1453 aa13.79□□□□□ -0.2
LCLAT1-207ENST00000476038 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
LCLAT1-207ENST00000476038 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
LCLAT1-207ENST00000476038 C5P01031 1676 aa13.77□□□□□ -0.21
LCLAT1-207ENST00000476038 NSD2O96028 1365 aa13.76□□□□□ -0.21
LCLAT1-207ENST00000476038 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
LCLAT1-207ENST00000476038 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
LCLAT1-207ENST00000476038 KCNQ4P56696 695 aa13.75□□□□□ -0.21
LCLAT1-207ENST00000476038 IP6K1Q92551 441 aa13.75□□□□□ -0.21
LCLAT1-207ENST00000476038 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
LCLAT1-207ENST00000476038 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
LCLAT1-207ENST00000476038 USP47Q96K76 1375 aa13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 CEP350Q5VT06 3117 aa13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
LCLAT1-207ENST00000476038 ADCY9O60503 1353 aa13.73□□□□□ -0.21
LCLAT1-207ENST00000476038 GOLGB1Q14789 3259 aaKnown RBP13.73□□□□□ -0.21
LCLAT1-207ENST00000476038 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
LCLAT1-207ENST00000476038 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 HSPA6P17066 643 aa13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 CD2APQ9Y5K6 639 aa13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 MEGF6O75095 1541 aa13.72□□□□□ -0.21
LCLAT1-207ENST00000476038 FLAD1Q8NFF5 587 aa13.71□□□□□ -0.21
LCLAT1-207ENST00000476038 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
LCLAT1-207ENST00000476038 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
LCLAT1-207ENST00000476038 AMPHP49418 695 aa13.69□□□□□ -0.22
LCLAT1-207ENST00000476038 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 HOXC9P31274 260 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 COG3Q96JB2 828 aa13.68□□□□□ -0.22
LCLAT1-207ENST00000476038 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
LCLAT1-207ENST00000476038 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
LCLAT1-207ENST00000476038 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
LCLAT1-207ENST00000476038 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
LCLAT1-207ENST00000476038 TOGARAM1Q9Y4F4 1720 aa13.66□□□□□ -0.22
LCLAT1-207ENST00000476038 PALLDQ8WX93 1383 aa13.66□□□□□ -0.22
LCLAT1-207ENST00000476038 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.22
LCLAT1-207ENST00000476038 ITGB4P16144 1822 aa13.65□□□□□ -0.22
LCLAT1-207ENST00000476038 NEUROD1Q13562 356 aa13.65□□□□□ -0.22
LCLAT1-207ENST00000476038 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
LCLAT1-207ENST00000476038 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 AK7Q96M32 723 aa13.64□□□□□ -0.23
LCLAT1-207ENST00000476038 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
LCLAT1-207ENST00000476038 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
LCLAT1-207ENST00000476038 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
LCLAT1-207ENST00000476038 NBPF6Q5VWK0 638 aa13.61□□□□□ -0.23
LCLAT1-207ENST00000476038 NBPF4Q96M43 638 aa13.61□□□□□ -0.23
LCLAT1-207ENST00000476038 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 KIF3CO14782 793 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 PHF14O94880 888 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 APLP1P51693 650 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
LCLAT1-207ENST00000476038 FBLN1P23142 703 aa13.59□□□□□ -0.23
LCLAT1-207ENST00000476038 SSFA2P28290 1259 aa13.59□□□□□ -0.23
LCLAT1-207ENST00000476038 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
LCLAT1-207ENST00000476038 MAP2P11137 1827 aaKnown RBP13.59□□□□□ -0.23
LCLAT1-207ENST00000476038 INSRP06213 1382 aa13.58□□□□□ -0.23
LCLAT1-207ENST00000476038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
LCLAT1-207ENST00000476038 FLT4P35916 1363 aa13.58□□□□□ -0.24
LCLAT1-207ENST00000476038 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.24
LCLAT1-207ENST00000476038 WDR90Q96KV7 1748 aa13.57□□□□□ -0.24
LCLAT1-207ENST00000476038 KIAA1551Q9HCM1 1747 aa13.57□□□□□ -0.24
LCLAT1-207ENST00000476038 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
LCLAT1-207ENST00000476038 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
LCLAT1-207ENST00000476038 CYP27B1O15528 508 aa13.56□□□□□ -0.24
LCLAT1-207ENST00000476038 TOMM70O94826 608 aa13.56□□□□□ -0.24
LCLAT1-207ENST00000476038 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
LCLAT1-207ENST00000476038 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
LCLAT1-207ENST00000476038 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
LCLAT1-207ENST00000476038 TESK2Q96S53 571 aa13.54□□□□□ -0.24
LCLAT1-207ENST00000476038 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
LCLAT1-207ENST00000476038 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 FYB1O15117 783 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 GNPATO15228 680 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 SIK1P57059 783 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
LCLAT1-207ENST00000476038 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms