RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 RGPD3A6NKT7 1758 aaPredicted RBP26.1■■□□□ 1.77
PDE6B-209ENST00000476034 RGPD4Q7Z3J3 1758 aa26.1■■□□□ 1.77
PDE6B-209ENST00000476034 IGSF1Q8N6C5 1336 aa26.1■■□□□ 1.77
PDE6B-209ENST00000476034 APBA3O96018 575 aa26.09■■□□□ 1.77
PDE6B-209ENST00000476034 DDX54Q8TDD1 881 aaKnown RBP26.09■■□□□ 1.77
PDE6B-209ENST00000476034 BCL11BQ9C0K0 894 aaPredicted RBP26.08■■□□□ 1.77
PDE6B-209ENST00000476034 PLEKHG2Q9H7P9 1386 aa26.07■■□□□ 1.76
PDE6B-209ENST00000476034 DOT1LQ8TEK3 1739 aa26.07■■□□□ 1.76
PDE6B-209ENST00000476034 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
PDE6B-209ENST00000476034 EN1Q05925 392 aaPredicted RBP26.06■■□□□ 1.76
PDE6B-209ENST00000476034 PCDH11XQ9BZA7 1347 aa26.06■■□□□ 1.76
PDE6B-209ENST00000476034 PCDH11YQ9BZA8 1340 aa26.06■■□□□ 1.76
PDE6B-209ENST00000476034 RREB1Q92766 1687 aa26.06■■□□□ 1.76
PDE6B-209ENST00000476034 IL13P35225 146 aa26.04■■□□□ 1.76
PDE6B-209ENST00000476034 COL3A1P02461 1466 aaPredicted RBP26.03■■□□□ 1.76
PDE6B-209ENST00000476034 CAMKK2Q96RR4 588 aa26.02■■□□□ 1.76
PDE6B-209ENST00000476034 BTAF1O14981 1849 aa26.02■■□□□ 1.76
PDE6B-209ENST00000476034 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.75
PDE6B-209ENST00000476034 PTF1AQ7RTS3 328 aa26.01■■□□□ 1.75
PDE6B-209ENST00000476034 ACSBG1Q96GR2 724 aa26.01■■□□□ 1.75
PDE6B-209ENST00000476034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.01■■□□□ 1.75
PDE6B-209ENST00000476034 SPG7Q9UQ90 795 aa26.01■■□□□ 1.75
PDE6B-209ENST00000476034 KDRP35968 1356 aa26■■□□□ 1.75
PDE6B-209ENST00000476034 DIAPH1O60610 1272 aaKnown RBP26■■□□□ 1.75
PDE6B-209ENST00000476034 EZH2Q15910 746 aaKnown RBP26■■□□□ 1.75
PDE6B-209ENST00000476034 NUP188Q5SRE5 1749 aa26■■□□□ 1.75
PDE6B-209ENST00000476034 KCNQ2O43526 872 aa25.99■■□□□ 1.75
PDE6B-209ENST00000476034 KAT6BQ8WYB5 2073 aa25.99■■□□□ 1.75
PDE6B-209ENST00000476034 PLSCR1O15162 318 aa25.98■■□□□ 1.75
PDE6B-209ENST00000476034 PPP2R1AP30153 589 aa25.98■■□□□ 1.75
PDE6B-209ENST00000476034 CYP27B1O15528 508 aa25.97■■□□□ 1.75
PDE6B-209ENST00000476034 SULT6B1Q6IMI4 303 aa25.96■■□□□ 1.75
PDE6B-209ENST00000476034 AEBP1Q8IUX7 1158 aa25.96■■□□□ 1.75
PDE6B-209ENST00000476034 CFAP53Q96M91 514 aa25.96■■□□□ 1.75
PDE6B-209ENST00000476034 TOGARAM1Q9Y4F4 1720 aa25.96■■□□□ 1.75
PDE6B-209ENST00000476034 AMOTQ4VCS5 1084 aa25.92■■□□□ 1.74
PDE6B-209ENST00000476034 PLEKHO1Q53GL0 409 aaPredicted RBP25.92■■□□□ 1.74
PDE6B-209ENST00000476034 ITGB4P16144 1822 aa25.91■■□□□ 1.74
PDE6B-209ENST00000476034 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
PDE6B-209ENST00000476034 NKX1-1Q15270 411 aaPredicted RBP25.91■■□□□ 1.74
PDE6B-209ENST00000476034 IFNL2Q8IZJ0 200 aa25.91■■□□□ 1.74
PDE6B-209ENST00000476034 SYTL4Q96C24 671 aaPredicted RBP25.91■■□□□ 1.74
PDE6B-209ENST00000476034 PHKG2P15735 406 aa25.9■■□□□ 1.74
PDE6B-209ENST00000476034 HMOX1P09601 288 aa25.88■■□□□ 1.73
PDE6B-209ENST00000476034 RALBP1Q15311 655 aa25.88■■□□□ 1.73
PDE6B-209ENST00000476034 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
PDE6B-209ENST00000476034 LY75O60449 1722 aa25.87■■□□□ 1.73
PDE6B-209ENST00000476034 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
PDE6B-209ENST00000476034 ZNF530Q6P9A1 599 aaPredicted RBP25.86■■□□□ 1.73
PDE6B-209ENST00000476034 TXNRD1Q16881 649 aa25.85■■□□□ 1.73
PDE6B-209ENST00000476034 NUDCQ9Y266 331 aa25.85■■□□□ 1.73
PDE6B-209ENST00000476034 HSP90AB1P08238 724 aaKnown RBP25.84■■□□□ 1.73
PDE6B-209ENST00000476034 PROM2Q8N271 834 aa25.84■■□□□ 1.73
PDE6B-209ENST00000476034 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
PDE6B-209ENST00000476034 C1orf141Q5JVX7 400 aa25.82■■□□□ 1.72
PDE6B-209ENST00000476034 MPRIPQ6WCQ1 1025 aa25.81■■□□□ 1.72
PDE6B-209ENST00000476034 DCAF5Q96JK2 942 aa25.81■■□□□ 1.72
PDE6B-209ENST00000476034 PAPPAQ13219 1627 aa25.81■■□□□ 1.72
PDE6B-209ENST00000476034 SCN11AQ9UI33 1791 aa25.8■■□□□ 1.72
PDE6B-209ENST00000476034 PSDA5PKW4 1024 aaPredicted RBP25.79■■□□□ 1.72
PDE6B-209ENST00000476034 VIRMAQ69YN4 1812 aaKnown RBP25.79■■□□□ 1.72
PDE6B-209ENST00000476034 KDM6AO15550 1401 aaPredicted RBP25.79■■□□□ 1.72
PDE6B-209ENST00000476034 R3HDM1Q15032 1099 aaKnown RBP25.78■■□□□ 1.72
PDE6B-209ENST00000476034 TMOD3Q9NYL9 352 aa25.78■■□□□ 1.72
PDE6B-209ENST00000476034 MYBBP1AQ9BQG0 1328 aaKnown RBP25.78■■□□□ 1.72
PDE6B-209ENST00000476034 U2AF1L5P0DN76 240 aaPredicted RBP25.77■■□□□ 1.72
PDE6B-209ENST00000476034 U2AF1Q01081 240 aaKnown RBP eCLIP25.77■■□□□ 1.72
PDE6B-209ENST00000476034 AKAP4Q5JQC9 854 aa25.77■■□□□ 1.72
PDE6B-209ENST00000476034 SLC27A3Q5K4L6 730 aa25.77■■□□□ 1.72
PDE6B-209ENST00000476034 ERVV-2B6SEH9 535 aa25.76■■□□□ 1.71
PDE6B-209ENST00000476034 PIGBQ92521 554 aa25.76■■□□□ 1.71
PDE6B-209ENST00000476034 ADAMTS7Q9UKP4 1686 aa25.75■■□□□ 1.71
PDE6B-209ENST00000476034 PALLDQ8WX93 1383 aa25.75■■□□□ 1.71
PDE6B-209ENST00000476034 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
PDE6B-209ENST00000476034 MTHFSDQ2M296 383 aaKnown RBP25.74■■□□□ 1.71
PDE6B-209ENST00000476034 ANO8Q9HCE9 1232 aaPredicted RBP25.74■■□□□ 1.71
PDE6B-209ENST00000476034 PRKAR2BP31323 418 aa25.73■■□□□ 1.71
PDE6B-209ENST00000476034 SMARCC1Q92922 1105 aaPredicted RBP25.73■■□□□ 1.71
PDE6B-209ENST00000476034 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
PDE6B-209ENST00000476034 LRRC4BQ9NT99 713 aa25.73■■□□□ 1.71
PDE6B-209ENST00000476034 C5P01031 1676 aa25.72■■□□□ 1.71
PDE6B-209ENST00000476034 FCHSD2O94868 740 aa25.72■■□□□ 1.71
PDE6B-209ENST00000476034 GAS2L2Q8NHY3 880 aa25.71■■□□□ 1.71
PDE6B-209ENST00000476034 STK32BQ9NY57 414 aa25.71■■□□□ 1.71
PDE6B-209ENST00000476034 CCNL1Q9UK58 526 aaPredicted RBP25.71■■□□□ 1.71
PDE6B-209ENST00000476034 CABP4P57796 275 aa25.7■■□□□ 1.7
PDE6B-209ENST00000476034 MRC1P22897 1456 aa25.7■■□□□ 1.7
PDE6B-209ENST00000476034 TAF1LQ8IZX4 1826 aa25.7■■□□□ 1.7
PDE6B-209ENST00000476034 CASZ1Q86V15 1759 aa25.69■■□□□ 1.7
PDE6B-209ENST00000476034 QSER1Q2KHR3 1735 aa25.68■■□□□ 1.7
PDE6B-209ENST00000476034 LRP5O75197 1615 aa25.68■■□□□ 1.7
PDE6B-209ENST00000476034 SLC15A2Q16348 729 aa25.68■■□□□ 1.7
PDE6B-209ENST00000476034 MAP3K5Q99683 1374 aa25.68■■□□□ 1.7
PDE6B-209ENST00000476034 HMGB2P26583 209 aaKnown RBP25.67■■□□□ 1.7
PDE6B-209ENST00000476034 PHACTR3Q96KR7 559 aa25.67■■□□□ 1.7
PDE6B-209ENST00000476034 ASAP1Q9ULH1 1129 aa25.67■■□□□ 1.7
PDE6B-209ENST00000476034 ZNF831Q5JPB2 1677 aa25.67■■□□□ 1.7
PDE6B-209ENST00000476034 KCNQ4P56696 695 aa25.66■■□□□ 1.7
PDE6B-209ENST00000476034 ATG3Q9NT62 314 aa25.66■■□□□ 1.7
PDE6B-209ENST00000476034 RNMTO43148 476 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms